Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is sseA [H]
Identifier: 15888551
GI number: 15888551
Start: 1208765
End: 1210186
Strand: Reverse
Name: sseA [H]
Synonym: Atu1215
Alternate gene names: 15888551
Gene position: 1210186-1208765 (Counterclockwise)
Preceding gene: 15888552
Following gene: 15888548
Centisome position: 42.59
GC content: 62.59
Gene sequence:
>1422_bases GTGAGCACGGATAAGAGCCGTTTCGTCGTTTCGGCGGACTGGGTGGAAAAACAACTCGGCACGGCCGGGTTTCGTGTCGT TGATGCGTCCTGGTATCTTCCGGCGCACAAGCGCAACGGCGCGGAGGAATATGCCGCCGGCCACCTGCCGGGTGCCGTGT TCTTCGACCAGGACAAGATCGCCGATCACACGACCGGCCTGCCGCATTCCCTGCCCTCGCCGGAATTCTTCGCGCAAGAG GCCGGCGAACTTGGTCTTAGCGAGAATGATACGATCGTGGTCTATGACGGCCCCGGTTTCTTCTCCGCGCCGCGTGTGTG GTGGATGCTGCGGGTGATGGGCGTGCGCAAGGCCTATGTGCTGGATGGCGGCCTCGACGGCTGGAAGCGCGAAGGCCGGC CGCTTGAAACCGGCACACCGGAGATCGAACCCGCCACCTTCACACCCGATTTCAACGACAAGCGCGTGACCTCGCTATCG ACCATGCGCGGCATCGTCGATAGCGGTGAAAAGCAGATTGCCGATGCCCGGGGTGCCGGACGTTTCACCGGCGACGAGGC CGAGCCGCGTGCCGGCATGCGCTCCGGCCACATGCCCGGCGCGCGCAGCCTGCCGGCGATGGCCTTTTCCGACAACGGTC ACTTCAAGGATCTGACCGCCATACGCAAGATGGTCACCGATGCCGGCATCGATCTTTCCAAGCCAGTGGTGACAAGCTGT GGCTCGGGCGTCACCGCCGCCGTCGTTACGCTGGCACTGGAATCGCTCGGTCATCACGATAACTCGCTCTATGACGGCTC GTGGTCGGAATGGGGTGGGCTCGAAGATACGCCCGTCGTCACCGGCGCTGCCGATCCCCTGCCCGTCATTTCCCATGGCC CGCTGAAGGCGCATGTGACACAGCTGGAAATGACCGCACCGCCAAAGGTCAGCCTGCCGATCCCGGTCAACCTCCAGACG GCGCTGATGCGGGTCAATAATATCCCCCTGCACTTCTACCGCTATCTCTACTGGCGGGTGGGGAAACGCTGGCATTGGCA GAAGCGCATGCGCATGAGCGATGCCGAGCTTTCCGCCATCCTGCGCGATCCGAAAAACAGCGTCACGGTTCTCTATATGA ACGGCGCGCCCGCCGGTTTCTTCGAACTGAACAAGGCGAGCGACGAAGTGACCGAGCTTTCCTATTTCGGGCTGCTCGAA GAGGCGATCGGCGCGGGCGTCGGCAAATGGTTCCTTCTGCAGGCGCTTTACGCCGCCTGGCAGGACAACCCGCAGCGGGT GACGGTGACCACGAATACGCTCGACCATCCGCGCGCATTGCAGCTTTACCAGATGATGGGCTTCTCGCCCGTCGGCACCT ATGAGGCCTGGGTGGAACCGCTTGCCGATACGGAGCTTCTGGAAATTTCGCTGCGTAACTGA
Upstream 100 bases:
>100_bases ATTCACATTGCCAAGATAGAAAAGAAGGGCAAGGAGAACAGGCGGTTCCGCATTCGTTTCGGCGCGCCTGAAGCTGCTGC CTGAAATCAGGAGAGACATC
Downstream 100 bases:
>100_bases GGGTGTGGCTCTCCCAGCCTGCCGCATATACCGCTCTCAATTAGGGTGCGCCCGACCCCACTCCCTCATTCCTGTGCTCG TCACAGTAATCCAGTCAGCC
Product: thiosulfate sulfurtransferase
Products: NA
Alternate protein names: MST; Rhodanese-like protein [H]
Number of amino acids: Translated: 473; Mature: 472
Protein sequence:
>473_residues MSTDKSRFVVSADWVEKQLGTAGFRVVDASWYLPAHKRNGAEEYAAGHLPGAVFFDQDKIADHTTGLPHSLPSPEFFAQE AGELGLSENDTIVVYDGPGFFSAPRVWWMLRVMGVRKAYVLDGGLDGWKREGRPLETGTPEIEPATFTPDFNDKRVTSLS TMRGIVDSGEKQIADARGAGRFTGDEAEPRAGMRSGHMPGARSLPAMAFSDNGHFKDLTAIRKMVTDAGIDLSKPVVTSC GSGVTAAVVTLALESLGHHDNSLYDGSWSEWGGLEDTPVVTGAADPLPVISHGPLKAHVTQLEMTAPPKVSLPIPVNLQT ALMRVNNIPLHFYRYLYWRVGKRWHWQKRMRMSDAELSAILRDPKNSVTVLYMNGAPAGFFELNKASDEVTELSYFGLLE EAIGAGVGKWFLLQALYAAWQDNPQRVTVTTNTLDHPRALQLYQMMGFSPVGTYEAWVEPLADTELLEISLRN
Sequences:
>Translated_473_residues MSTDKSRFVVSADWVEKQLGTAGFRVVDASWYLPAHKRNGAEEYAAGHLPGAVFFDQDKIADHTTGLPHSLPSPEFFAQE AGELGLSENDTIVVYDGPGFFSAPRVWWMLRVMGVRKAYVLDGGLDGWKREGRPLETGTPEIEPATFTPDFNDKRVTSLS TMRGIVDSGEKQIADARGAGRFTGDEAEPRAGMRSGHMPGARSLPAMAFSDNGHFKDLTAIRKMVTDAGIDLSKPVVTSC GSGVTAAVVTLALESLGHHDNSLYDGSWSEWGGLEDTPVVTGAADPLPVISHGPLKAHVTQLEMTAPPKVSLPIPVNLQT ALMRVNNIPLHFYRYLYWRVGKRWHWQKRMRMSDAELSAILRDPKNSVTVLYMNGAPAGFFELNKASDEVTELSYFGLLE EAIGAGVGKWFLLQALYAAWQDNPQRVTVTTNTLDHPRALQLYQMMGFSPVGTYEAWVEPLADTELLEISLRN >Mature_472_residues STDKSRFVVSADWVEKQLGTAGFRVVDASWYLPAHKRNGAEEYAAGHLPGAVFFDQDKIADHTTGLPHSLPSPEFFAQEA GELGLSENDTIVVYDGPGFFSAPRVWWMLRVMGVRKAYVLDGGLDGWKREGRPLETGTPEIEPATFTPDFNDKRVTSLST MRGIVDSGEKQIADARGAGRFTGDEAEPRAGMRSGHMPGARSLPAMAFSDNGHFKDLTAIRKMVTDAGIDLSKPVVTSCG SGVTAAVVTLALESLGHHDNSLYDGSWSEWGGLEDTPVVTGAADPLPVISHGPLKAHVTQLEMTAPPKVSLPIPVNLQTA LMRVNNIPLHFYRYLYWRVGKRWHWQKRMRMSDAELSAILRDPKNSVTVLYMNGAPAGFFELNKASDEVTELSYFGLLEE AIGAGVGKWFLLQALYAAWQDNPQRVTVTTNTLDHPRALQLYQMMGFSPVGTYEAWVEPLADTELLEISLRN
Specific function: Transfers a sulfur ion to cyanide or to other thiol compounds. Also has weak rhodanese activity. Its participation in detoxification of cyanide may be small. May be involved in the enhancement of serine sensitivity [H]
COG id: COG2897
COG function: function code P; Rhodanese-related sulfurtransferase
Gene ontology:
Cell location: Cytoplasm (Probable) [H]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 2 rhodanese domains [H]
Homologues:
Organism=Homo sapiens, GI61835204, Length=304, Percent_Identity=40.1315789473684, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI194473681, Length=304, Percent_Identity=40.1315789473684, Blast_Score=211, Evalue=1e-54, Organism=Homo sapiens, GI194473668, Length=304, Percent_Identity=40.1315789473684, Blast_Score=211, Evalue=2e-54, Organism=Homo sapiens, GI17402865, Length=273, Percent_Identity=40.2930402930403, Blast_Score=194, Evalue=1e-49, Organism=Escherichia coli, GI87082121, Length=276, Percent_Identity=42.7536231884058, Blast_Score=232, Evalue=4e-62, Organism=Escherichia coli, GI87081967, Length=278, Percent_Identity=26.6187050359712, Blast_Score=82, Evalue=5e-17, Organism=Caenorhabditis elegans, GI71997283, Length=250, Percent_Identity=28, Blast_Score=89, Evalue=5e-18, Organism=Caenorhabditis elegans, GI17561888, Length=295, Percent_Identity=24.7457627118644, Blast_Score=85, Evalue=8e-17, Organism=Caenorhabditis elegans, GI17559150, Length=279, Percent_Identity=26.5232974910394, Blast_Score=82, Evalue=7e-16, Organism=Caenorhabditis elegans, GI115534702, Length=226, Percent_Identity=26.9911504424779, Blast_Score=74, Evalue=2e-13, Organism=Caenorhabditis elegans, GI17543836, Length=274, Percent_Identity=26.2773722627737, Blast_Score=67, Evalue=2e-11, Organism=Caenorhabditis elegans, GI17543838, Length=274, Percent_Identity=26.2773722627737, Blast_Score=67, Evalue=2e-11, Organism=Saccharomyces cerevisiae, GI6324825, Length=270, Percent_Identity=35.5555555555556, Blast_Score=156, Evalue=5e-39,
Paralogues:
None
Copy number: 20 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001763 - InterPro: IPR001307 [H]
Pfam domain/function: PF00581 Rhodanese [H]
EC number: =2.8.1.2 [H]
Molecular weight: Translated: 52009; Mature: 51878
Theoretical pI: Translated: 5.60; Mature: 5.60
Prosite motif: PS00380 RHODANESE_1 ; PS50206 RHODANESE_3
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.2 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTDKSRFVVSADWVEKQLGTAGFRVVDASWYLPAHKRNGAEEYAAGHLPGAVFFDQDKI CCCCCCEEEEEHHHHHHHHCCCCEEEEECEEECCCCCCCCHHHHHCCCCCCEEEECCCHH ADHTTGLPHSLPSPEFFAQEAGELGLSENDTIVVYDGPGFFSAPRVWWMLRVMGVRKAYV CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEE LDGGLDGWKREGRPLETGTPEIEPATFTPDFNDKRVTSLSTMRGIVDSGEKQIADARGAG EECCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCC RFTGDEAEPRAGMRSGHMPGARSLPAMAFSDNGHFKDLTAIRKMVTDAGIDLSKPVVTSC CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHC GSGVTAAVVTLALESLGHHDNSLYDGSWSEWGGLEDTPVVTGAADPLPVISHGPLKAHVT CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEECCCCCCCCCCCCCCEEEEE QLEMTAPPKVSLPIPVNLQTALMRVNNIPLHFYRYLYWRVGKRWHWQKRMRMSDAELSAI EEEECCCCCEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH LRDPKNSVTVLYMNGAPAGFFELNKASDEVTELSYFGLLEEAIGAGVGKWFLLQALYAAW HHCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QDNPQRVTVTTNTLDHPRALQLYQMMGFSPVGTYEAWVEPLADTELLEISLRN CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEECC >Mature Secondary Structure STDKSRFVVSADWVEKQLGTAGFRVVDASWYLPAHKRNGAEEYAAGHLPGAVFFDQDKI CCCCCEEEEEHHHHHHHHCCCCEEEEECEEECCCCCCCCHHHHHCCCCCCEEEECCCHH ADHTTGLPHSLPSPEFFAQEAGELGLSENDTIVVYDGPGFFSAPRVWWMLRVMGVRKAYV CCCCCCCCCCCCCHHHHHHHHHCCCCCCCCEEEEECCCCCCCCHHHHHHHHHHHCCEEEE LDGGLDGWKREGRPLETGTPEIEPATFTPDFNDKRVTSLSTMRGIVDSGEKQIADARGAG EECCCCCHHHCCCCCCCCCCCCCCCEECCCCCCCHHHHHHHHHHHHHCCHHHHHHCCCCC RFTGDEAEPRAGMRSGHMPGARSLPAMAFSDNGHFKDLTAIRKMVTDAGIDLSKPVVTSC CCCCCCCCCCCCCCCCCCCCCCCCCCEEECCCCCHHHHHHHHHHHHHCCCCCCCCHHHHC GSGVTAAVVTLALESLGHHDNSLYDGSWSEWGGLEDTPVVTGAADPLPVISHGPLKAHVT CCCHHHHHHHHHHHHHCCCCCCCCCCCCHHCCCCCCCCEEECCCCCCCCCCCCCCEEEEE QLEMTAPPKVSLPIPVNLQTALMRVNNIPLHFYRYLYWRVGKRWHWQKRMRMSDAELSAI EEEECCCCCEECCCCCCHHHHHHHHCCCCHHHHHHHHHHHCCCHHHHHHHHCCHHHHHHH LRDPKNSVTVLYMNGAPAGFFELNKASDEVTELSYFGLLEEAIGAGVGKWFLLQALYAAW HHCCCCCEEEEEECCCCCCEEEECCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHH QDNPQRVTVTTNTLDHPRALQLYQMMGFSPVGTYEAWVEPLADTELLEISLRN CCCCCEEEEEECCCCCCHHHHHHHHHCCCCCCCHHHHHHCCCCCEEEEEEECC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11206551; 11258796 [H]