Click here to switch to the map view.

The map label for this gene is 15888548

Identifier: 15888548

GI number: 15888548

Start: 1206334

End: 1206801

Strand: Reverse

Name: 15888548

Synonym: Atu1212

Alternate gene names: NA

Gene position: 1206801-1206334 (Counterclockwise)

Preceding gene: 15888551

Following gene: 159185432

Centisome position: 42.47

GC content: 61.75

Gene sequence:

>468_bases
ATGACCGATCTCGTCTTCACTGCAATGCCGGCTAAGGAAGCTGAGGCCTTCCGGGCGGGTGCTCCCGACGCCTATGGCCT
CATGCCGGAAAAGGCCGTTTCGCCGGGCGGCATGCCCTGCCGCCACTGCCTGTCGCAGATCGGTGAAGGCGAAGCGATGC
TGATCCTCGCCTACCGGCCCTTTCCCTCGCTTCAACCCTATGCGGAAACCGGGCCGGTCTTTCTGCATGTGCAAGCATGT
AAGCGTTATCCGCAGACGGCGGCCGTTCCGCCGATGCTGGACAGCCCGAATTATATCGTGCGCGGATATGGAGCCGACGA
CCGCATCGTCTACGGCACCGGCGCGGTGACTGCGACGGGTGAGATCGTGTCGCGGGCGCGGCATCTTCTTGAGCGTGCGG
ATGTCGCTTATGTACATGTGCGCTCCGCCCGCAACAATTGCTATCAGTGCCGTATCGATACAGCATAA

Upstream 100 bases:

>100_bases
GGCTGGTTGCATCACTTGTCAAGAATCGGGTGGATAGTGCTCCATTTCGGGATCATAGCTGCAAACAAGCAACGCCGATC
CCAATCCAAGAGGCCCCGCC

Downstream 100 bases:

>100_bases
TCGGCAATTACCTGCAATTTTAACTGAAGAACTAAATGGCTCTCAAGCTTTCCGCAGCATGATGCATGGTATCGGAAACA
AATTGATTTGAGCAGCAACA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 155; Mature: 154

Protein sequence:

>155_residues
MTDLVFTAMPAKEAEAFRAGAPDAYGLMPEKAVSPGGMPCRHCLSQIGEGEAMLILAYRPFPSLQPYAETGPVFLHVQAC
KRYPQTAAVPPMLDSPNYIVRGYGADDRIVYGTGAVTATGEIVSRARHLLERADVAYVHVRSARNNCYQCRIDTA

Sequences:

>Translated_155_residues
MTDLVFTAMPAKEAEAFRAGAPDAYGLMPEKAVSPGGMPCRHCLSQIGEGEAMLILAYRPFPSLQPYAETGPVFLHVQAC
KRYPQTAAVPPMLDSPNYIVRGYGADDRIVYGTGAVTATGEIVSRARHLLERADVAYVHVRSARNNCYQCRIDTA
>Mature_154_residues
TDLVFTAMPAKEAEAFRAGAPDAYGLMPEKAVSPGGMPCRHCLSQIGEGEAMLILAYRPFPSLQPYAETGPVFLHVQACK
RYPQTAAVPPMLDSPNYIVRGYGADDRIVYGTGAVTATGEIVSRARHLLERADVAYVHVRSARNNCYQCRIDTA

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 16850; Mature: 16718

Theoretical pI: Translated: 7.40; Mature: 7.40

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

3.2 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
7.1 %Cys+Met (Translated Protein)
3.2 %Cys     (Mature Protein)
3.2 %Met     (Mature Protein)
6.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTDLVFTAMPAKEAEAFRAGAPDAYGLMPEKAVSPGGMPCRHCLSQIGEGEAMLILAYRP
CCCCEEEECCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCEEEEEEECC
FPSLQPYAETGPVFLHVQACKRYPQTAAVPPMLDSPNYIVRGYGADDRIVYGTGAVTATG
CCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEHH
EIVSRARHLLERADVAYVHVRSARNNCYQCRIDTA
HHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECC
>Mature Secondary Structure 
TDLVFTAMPAKEAEAFRAGAPDAYGLMPEKAVSPGGMPCRHCLSQIGEGEAMLILAYRP
CCCEEEECCCHHHHHHHCCCCCCCCCCCCHHCCCCCCCHHHHHHHHCCCCEEEEEEECC
FPSLQPYAETGPVFLHVQACKRYPQTAAVPPMLDSPNYIVRGYGADDRIVYGTGAVTATG
CCCCCCCCCCCCEEEEEHHHHCCCCCCCCCCCCCCCCEEEEEECCCCCEEEECCCEEEHH
EIVSRARHLLERADVAYVHVRSARNNCYQCRIDTA
HHHHHHHHHHHHCCEEEEEEECCCCCEEEEEEECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA