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The map label for this gene is 15888520

Identifier: 15888520

GI number: 15888520

Start: 1175006

End: 1175734

Strand: Direct

Name: 15888520

Synonym: Atu1182

Alternate gene names: NA

Gene position: 1175006-1175734 (Clockwise)

Preceding gene: 159184653

Following gene: 15888521

Centisome position: 41.35

GC content: 61.87

Gene sequence:

>729_bases
GTGAGCAACCGAAAATCGACAGCACGACGCCGCACGGCGAAGAAATCGAGCGGCGGCAGCGTTTGGCCCTGGGTGCTGAT
GCTGGGCGTCGTTGCCGGCGGCATTCAGGCTTACGAATATCGTGACAGCCTTCTGCCGCAACGGCATGCTGCGAAGGCGA
CGTCGTCAGCCACAAATTCCCCGAAAGTCGCGACAACCGCCAGGCGTGACACCGTCACCACTGAGAAAGTGGCATCCATT
CGTCCCGCATCGCCGGTTCTGCCCGGCAACGGCCCGGTGCCGCCGCGTCCGATCGCCATGCCATCCATCGCACCGCCGAG
CCAGGTTGCCGGCATCCTGCCGGAAACGCGTCCCTCGGTCGAAAAAATCTCGCTCGGCGAAAAAAGCGGTGCCTTTGCCT
TCTGCGGCCGCTCTGGCCTCAATAATTGTGTGGCCGATGGCAATACTTTCTGGATGAAGGGCGTGAAGATGCAGCTCGCC
GGCATCGATGTCCCGCAGATCGACCGGGCGCGCTGCATGGAAGAGCGCCAGCGTGGTTTCATTGCAAAGGTCAGGCTTCG
CGACATGTTGAATGCCGGCACCTTCGATGTGGCGTCCTCCGGCGAAGCTGGGGGACAAGCCCTGGAACGCAAACGGCTTT
CACGTTCGGGTGTTTCTTTTGCCGATCAGCTCGTGCGGGAGGGGCTCGCGCATCCGGCCTCGGTAAAAAATCAGTCCTGG
TGTGGCTGA

Upstream 100 bases:

>100_bases
GATCAGGTCCGCTGAAGGTTTATCCACAGCTGTTTTGAAATGCCAACCTTTCGGAAACTCCTTTGGCCGATAATGCGGCT
CCGTTGAAAGGAGTCCGATC

Downstream 100 bases:

>100_bases
GGCCCCGTTGACCGAAACCGCCCTGCCTGTGTAGATGAGGCTCCGTCGCGTTTGGGATCGGCCGTCTGGCCGGGCGCCCT
GGGGATGACGGCTTTTGCAG

Product: hypothetical protein

Products: NA

Alternate protein names: Transmembrane Protein; Nuclease Protein; Orf_Bo

Number of amino acids: Translated: 242; Mature: 241

Protein sequence:

>242_residues
MSNRKSTARRRTAKKSSGGSVWPWVLMLGVVAGGIQAYEYRDSLLPQRHAAKATSSATNSPKVATTARRDTVTTEKVASI
RPASPVLPGNGPVPPRPIAMPSIAPPSQVAGILPETRPSVEKISLGEKSGAFAFCGRSGLNNCVADGNTFWMKGVKMQLA
GIDVPQIDRARCMEERQRGFIAKVRLRDMLNAGTFDVASSGEAGGQALERKRLSRSGVSFADQLVREGLAHPASVKNQSW
CG

Sequences:

>Translated_242_residues
MSNRKSTARRRTAKKSSGGSVWPWVLMLGVVAGGIQAYEYRDSLLPQRHAAKATSSATNSPKVATTARRDTVTTEKVASI
RPASPVLPGNGPVPPRPIAMPSIAPPSQVAGILPETRPSVEKISLGEKSGAFAFCGRSGLNNCVADGNTFWMKGVKMQLA
GIDVPQIDRARCMEERQRGFIAKVRLRDMLNAGTFDVASSGEAGGQALERKRLSRSGVSFADQLVREGLAHPASVKNQSW
CG
>Mature_241_residues
SNRKSTARRRTAKKSSGGSVWPWVLMLGVVAGGIQAYEYRDSLLPQRHAAKATSSATNSPKVATTARRDTVTTEKVASIR
PASPVLPGNGPVPPRPIAMPSIAPPSQVAGILPETRPSVEKISLGEKSGAFAFCGRSGLNNCVADGNTFWMKGVKMQLAG
IDVPQIDRARCMEERQRGFIAKVRLRDMLNAGTFDVASSGEAGGQALERKRLSRSGVSFADQLVREGLAHPASVKNQSWC
G

Specific function: Unknown

COG id: COG1525

COG function: function code L; Micrococcal nuclease (thermonuclease) homologs

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25814; Mature: 25683

Theoretical pI: Translated: 11.18; Mature: 11.18

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.7 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.7 %Cys     (Mature Protein)
2.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSNRKSTARRRTAKKSSGGSVWPWVLMLGVVAGGIQAYEYRDSLLPQRHAAKATSSATNS
CCCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCC
PKVATTARRDTVTTEKVASIRPASPVLPGNGPVPPRPIAMPSIAPPSQVAGILPETRPSV
CCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCH
EKISLGEKSGAFAFCGRSGLNNCVADGNTFWMKGVKMQLAGIDVPQIDRARCMEERQRGF
HHHCCCCCCCCEEECCCCCCCHHHCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHCCH
IAKVRLRDMLNAGTFDVASSGEAGGQALERKRLSRSGVSFADQLVREGLAHPASVKNQSW
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
CG
CC
>Mature Secondary Structure 
SNRKSTARRRTAKKSSGGSVWPWVLMLGVVAGGIQAYEYRDSLLPQRHAAKATSSATNS
CCCHHHHHHHHHHCCCCCCHHHHHHHHHHHHCCHHHHHHHHHHCCHHHHHHHHHCCCCC
PKVATTARRDTVTTEKVASIRPASPVLPGNGPVPPRPIAMPSIAPPSQVAGILPETRPSV
CCEEEHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHCCCCCCCCH
EKISLGEKSGAFAFCGRSGLNNCVADGNTFWMKGVKMQLAGIDVPQIDRARCMEERQRGF
HHHCCCCCCCCEEECCCCCCCHHHCCCCEEEECCEEEEEECCCCCCCHHHHHHHHHHCCH
IAKVRLRDMLNAGTFDVASSGEAGGQALERKRLSRSGVSFADQLVREGLAHPASVKNQSW
HHHHHHHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCCCC
CG
CC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA