Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888488
Identifier: 15888488
GI number: 15888488
Start: 1141394
End: 1141924
Strand: Reverse
Name: 15888488
Synonym: Atu1150
Alternate gene names: NA
Gene position: 1141924-1141394 (Counterclockwise)
Preceding gene: 159184639
Following gene: 15888487
Centisome position: 40.19
GC content: 59.89
Gene sequence:
>531_bases ATGAAAACTGCCCGCACTCTGCTGCTCGCCGTGCTTCTCGCGGCGGCAGGCATTCTCCCCTCTCTTCCAGCCCGGGCCGC AGAGGACAAGGTCGATCTGCAGGGTGAATGGACGACCGACTGCCTGAAGATCGGCAAGAACGACCGCAACGGCATCATCA CGCGCATCACCATTCGCGATAGCCGCATACATGCGGTGTCGCAGATTTATGCCAGCAACGGCTGCCAGCGGCCGACGGTG CAGGTGCGTTACGAGGGCACGCTGGATGGCGGCCTGAAAGATCAGAACAGCCTGCTCTTTGCCCACACCGTCACCTCGAT CACCATGACCCCGAATGATGGCGATGTCGTCGAACACTATAATCGCGATCCGAAAGGCATGGGCTGTGGCCTGAACGACT GGAAAGAAATATTGCCCTCGACGTCGATGGCCGAACCTGCGCCGCCATCACCTTTGCCCGCAAAGGGGAAACCCTGTTCG ACCGCGCCTGGATCGATGGCAACAAGCTTCGTTTTGCCGCCTTTCCGGTGA
Upstream 100 bases:
>100_bases GGCAGCGAGCGAGTCGTAACCGCCCGCCTTTCTCACCCCAATTTTGCCCGCATCGCGTCCCATTTCTCTACCGATGGTCA TGCGATTTGAGGGTCTTGCC
Downstream 100 bases:
>100_bases AATGGTCGAACCACACGCCCGACGACCGGCCACAATCCCCGCTTGAAACCGTCTATTACAGAACATCCTATTAGAAGTAG TGCCTCATCGGCAGGCGTTT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 176; Mature: 176
Protein sequence:
>176_residues MKTARTLLLAVLLAAAGILPSLPARAAEDKVDLQGEWTTDCLKIGKNDRNGIITRITIRDSRIHAVSQIYASNGCQRPTV QVRYEGTLDGGLKDQNSLLFAHTVTSITMTPNDGDVVEHYNRDPKGMGCGLNDWKEILPSTSMAEPAPPSPLPAKGKPCS TAPGSMATSFVLPPFR
Sequences:
>Translated_176_residues MKTARTLLLAVLLAAAGILPSLPARAAEDKVDLQGEWTTDCLKIGKNDRNGIITRITIRDSRIHAVSQIYASNGCQRPTV QVRYEGTLDGGLKDQNSLLFAHTVTSITMTPNDGDVVEHYNRDPKGMGCGLNDWKEILPSTSMAEPAPPSPLPAKGKPCS TAPGSMATSFVLPPFR >Mature_176_residues MKTARTLLLAVLLAAAGILPSLPARAAEDKVDLQGEWTTDCLKIGKNDRNGIITRITIRDSRIHAVSQIYASNGCQRPTV QVRYEGTLDGGLKDQNSLLFAHTVTSITMTPNDGDVVEHYNRDPKGMGCGLNDWKEILPSTSMAEPAPPSPLPAKGKPCS TAPGSMATSFVLPPFR
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 18899; Mature: 18899
Theoretical pI: Translated: 8.33; Mature: 8.33
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.3 %Cys (Translated Protein) 2.8 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 2.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 5.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MKTARTLLLAVLLAAAGILPSLPARAAEDKVDLQGEWTTDCLKIGKNDRNGIITRITIRD CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEC SRIHAVSQIYASNGCQRPTVQVRYEGTLDGGLKDQNSLLFAHTVTSITMTPNDGDVVEHY CHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHC NRDPKGMGCGLNDWKEILPSTSMAEPAPPSPLPAKGKPCSTAPGSMATSFVLPPFR CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC >Mature Secondary Structure MKTARTLLLAVLLAAAGILPSLPARAAEDKVDLQGEWTTDCLKIGKNDRNGIITRITIRD CCHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCCCCCHHHHHCCCCCCCCEEEEEEEEC SRIHAVSQIYASNGCQRPTVQVRYEGTLDGGLKDQNSLLFAHTVTSITMTPNDGDVVEHY CHHHHHHHHHHCCCCCCCEEEEEECCCCCCCCCCCCCEEEEEEEEEEEECCCCCCHHHHC NRDPKGMGCGLNDWKEILPSTSMAEPAPPSPLPAKGKPCSTAPGSMATSFVLPPFR CCCCCCCCCCHHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCCEECCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA