Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is pgsA [H]
Identifier: 15888465
GI number: 15888465
Start: 1116733
End: 1117320
Strand: Reverse
Name: pgsA [H]
Synonym: Atu1128
Alternate gene names: 15888465
Gene position: 1117320-1116733 (Counterclockwise)
Preceding gene: 159184627
Following gene: 159184626
Centisome position: 39.32
GC content: 56.97
Gene sequence:
>588_bases ATGGCTTCGCGCGCATACAACATTCCCAACCTCCTCACCTATGCCCGCATCCTTGCGGTTCCTGTCATCGTTTTGTGTTT CTTTATCGAAGGAAAGCTGGAAAGCTCGGACTTCGCGCGCTGGACGGCACTCTGGCTGTTCATCGTCGCTTCGCTGACCG ATTTTCTCGACGGTTATCTCGCCCGCATCTGGAACCAGACGTCGAATATCGGCCGCATGCTGGACCCGATAGCCGACAAG CTGCTGGTCGCCTCCGTGCTGCTGTTGATGGCGGCGGATGGCACCATTGCCGGCTGGTCGCTCTGGGCTGCGATTACCAT TCTCTGCCGTGAAATTCTGGTTTCCGGCCTGCGCGAATATCTAGCTGCGCTGAAGGTCAGCGTTCCCGTCACCCAGATCG CCAAATGGAAGACAACCATCCAGATGGTTGCCATCGCCTTTCTTCTCGCAGGTCCTGCGGGCGACAAGGTGCTGCCCTAT ACGACCGAGATGGGGATTACGCTTCTGTGGCTCGCCGCGGCGCTGACCATGTATACCGGTTATGATTACTTCAAGGCGGG TCTCAAGCACATTGTGGACGAAGAATGA
Upstream 100 bases:
>100_bases CAGAACGGTAAGACCGATCTGCTAAAAAACCATAATAACGTGTTGACCCTATGCGTCAGGGACGGCATCAAAGCAGCTTA TCCAGACTGACAGGTTTTCC
Downstream 100 bases:
>100_bases TGACGCGGATCGTTTATTTCGCCTGGGTTCGCGAGAAGATCGGCACGGATGAGGAAGAGCTGGATATCCCTTCCTCCGTC ACCACCGCCGGCGAGCTGAT
Product: phosphatidylglycerophosphate synthase
Products: NA
Alternate protein names: Phosphatidylglycerophosphate synthase; PGP synthase [H]
Number of amino acids: Translated: 195; Mature: 194
Protein sequence:
>195_residues MASRAYNIPNLLTYARILAVPVIVLCFFIEGKLESSDFARWTALWLFIVASLTDFLDGYLARIWNQTSNIGRMLDPIADK LLVASVLLLMAADGTIAGWSLWAAITILCREILVSGLREYLAALKVSVPVTQIAKWKTTIQMVAIAFLLAGPAGDKVLPY TTEMGITLLWLAAALTMYTGYDYFKAGLKHIVDEE
Sequences:
>Translated_195_residues MASRAYNIPNLLTYARILAVPVIVLCFFIEGKLESSDFARWTALWLFIVASLTDFLDGYLARIWNQTSNIGRMLDPIADK LLVASVLLLMAADGTIAGWSLWAAITILCREILVSGLREYLAALKVSVPVTQIAKWKTTIQMVAIAFLLAGPAGDKVLPY TTEMGITLLWLAAALTMYTGYDYFKAGLKHIVDEE >Mature_194_residues ASRAYNIPNLLTYARILAVPVIVLCFFIEGKLESSDFARWTALWLFIVASLTDFLDGYLARIWNQTSNIGRMLDPIADKL LVASVLLLMAADGTIAGWSLWAAITILCREILVSGLREYLAALKVSVPVTQIAKWKTTIQMVAIAFLLAGPAGDKVLPYT TEMGITLLWLAAALTMYTGYDYFKAGLKHIVDEE
Specific function: This protein catalyzes the committed step to the synthesis of the acidic phospholipids [H]
COG id: COG0558
COG function: function code I; Phosphatidylglycerophosphate synthase
Gene ontology:
Cell location: Cell membrane; Multi-pass membrane protein [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the CDP-alcohol phosphatidyltransferase class-I family [H]
Homologues:
Organism=Escherichia coli, GI1788220, Length=191, Percent_Identity=39.7905759162304, Blast_Score=120, Evalue=8e-29, Organism=Saccharomyces cerevisiae, GI6320059, Length=165, Percent_Identity=33.3333333333333, Blast_Score=71, Evalue=1e-13,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000462 - InterPro: IPR004570 [H]
Pfam domain/function: PF01066 CDP-OH_P_transf [H]
EC number: =2.7.8.5 [H]
Molecular weight: Translated: 21552; Mature: 21421
Theoretical pI: Translated: 5.90; Mature: 5.90
Prosite motif: PS00379 CDP_ALCOHOL_P_TRANSF
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 4.1 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASRAYNIPNLLTYARILAVPVIVLCFFIEGKLESSDFARWTALWLFIVASLTDFLDGYL CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ARIWNQTSNIGRMLDPIADKLLVASVLLLMAADGTIAGWSLWAAITILCREILVSGLREY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAALKVSVPVTQIAKWKTTIQMVAIAFLLAGPAGDKVLPYTTEMGITLLWLAAALTMYTG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC YDYFKAGLKHIVDEE HHHHHHHHHHHCCCC >Mature Secondary Structure ASRAYNIPNLLTYARILAVPVIVLCFFIEGKLESSDFARWTALWLFIVASLTDFLDGYL CCCCCCCHHHHHHHHHHHHHHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHH ARIWNQTSNIGRMLDPIADKLLVASVLLLMAADGTIAGWSLWAAITILCREILVSGLREY HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHH LAALKVSVPVTQIAKWKTTIQMVAIAFLLAGPAGDKVLPYTTEMGITLLWLAAALTMYTG HHHHHHCCCHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHCC YDYFKAGLKHIVDEE HHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: NA