Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888445

Identifier: 15888445

GI number: 15888445

Start: 1093678

End: 1094625

Strand: Reverse

Name: 15888445

Synonym: Atu1105

Alternate gene names: NA

Gene position: 1094625-1093678 (Counterclockwise)

Preceding gene: 15888446

Following gene: 159184615

Centisome position: 38.52

GC content: 57.59

Gene sequence:

>948_bases
ATGATGAATTTCGGAAAGTCGGCTTTGCGTGGCGCTGCTTTTGCCTTTGCGATTTTCGCCGTTCCCATGGCCGTTGTGCC
TTATGCCGGCCAGGCCTTCGCCGACAGTACCGTCAAGATCGTCGTCAACAAGACGCCCATCACCAACGATGATATTGCAA
GACGTGTTGCCTTCCTGAAGCTGCAGCGCCAGTCGGGCAATCTCAACGAAAAAGCTCGCGAACAGCTGGTCGACGAGGCT
CTGAAGCGCGAAGAGATTGCGCGCGTGAAGATGTCGGTCAGTACGCAGGACGTCGATGCAGCCTTCGCGCGATTTGCCGG
CAATAATAAAATGAAGCCCGAGCAACTGACAAAAGTTCTTGCACAGGCGGGTGTTGGCGCCGAGCACTTCAAAGCCTTCA
TCGCCGTTCAGATGAGCTGGCCGCGCCTCGTCAACGCCCGTTATGGCGCCCGCGGCAAGATGTCGAACCAGGATCTCGTC
ACCCGCCTGAAGGAACGCGGCGAAAAGCCCGTAACCACGGAATATTTTCTGCAGCAGGTCATCTTCGTCATCCCGGAAGC
AAAGCGCAACGCCATCACCGGCAAGCGCAAGGCCGAGGCAGAAGCCTCGCGCAAGCGTTATCCTGGCTGCGACCAGGCCA
TGAGCTTTGCCGCGACCATGCGTGACGTGGCGATCAAGGATCTCGGACGCATTCTCGCGCCGGAACTGCCGGAAGACTGG
AAGGCGCTGGTGGAGAAAACCAAGGAAGGCGGCACCACCGGCACGCGTGTGACCGAGAAGGGCGTCGAATATCTGGCCAT
CTGCAAGCAACGTCAGGTTTCCGACGACTATGCCGCGGAAATGGTGTTCAAGTCTGAAGACCTGATGAAGGCCAAGGACG
GCGAAAACCCGAACGAGAAGAAATATATCGAGGAACTGCGCAAGAAGGCGCAGATCGTCAACACCTGA

Upstream 100 bases:

>100_bases
GTGCAGGTCTGAAAAGCCGGGGAGTTGAATACTCCCCGCTTCGGGCGGAACAGATTGGCGGAACAGGGCAAGGACCCTGG
CCGACGAAAGGGAGAAGCAT

Downstream 100 bases:

>100_bases
TATTGATACGAGAGCCGGGTCTTTCCGTGACACATGCATCCCTGCCGCTTGCCCTGACCCAGGGAGATCCAGCCGGTATC
GGCCCCGATATCGCCATCAA

Product: hypothetical protein

Products: NA

Alternate protein names: Peptidyl-Prolyl Cis-Trans Isomerase Protein; SurA Domain-Containing Protein; Peptidyl-Prolyl Cis-Trans Isomerase; SurA N-Terminal Domain Family; SurA N- Domain Family; PpiC-Type Peptidyl-Prolyl Cis-Trans Isomerase; Ppic-Type Ppiase Domain Protein; SurA N-Terminal Domain Family Protein; SurA Domain; Survival Protein SurA; SurA Domain Protein

Number of amino acids: Translated: 315; Mature: 315

Protein sequence:

>315_residues
MMNFGKSALRGAAFAFAIFAVPMAVVPYAGQAFADSTVKIVVNKTPITNDDIARRVAFLKLQRQSGNLNEKAREQLVDEA
LKREEIARVKMSVSTQDVDAAFARFAGNNKMKPEQLTKVLAQAGVGAEHFKAFIAVQMSWPRLVNARYGARGKMSNQDLV
TRLKERGEKPVTTEYFLQQVIFVIPEAKRNAITGKRKAEAEASRKRYPGCDQAMSFAATMRDVAIKDLGRILAPELPEDW
KALVEKTKEGGTTGTRVTEKGVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKDGENPNEKKYIEELRKKAQIVNT

Sequences:

>Translated_315_residues
MMNFGKSALRGAAFAFAIFAVPMAVVPYAGQAFADSTVKIVVNKTPITNDDIARRVAFLKLQRQSGNLNEKAREQLVDEA
LKREEIARVKMSVSTQDVDAAFARFAGNNKMKPEQLTKVLAQAGVGAEHFKAFIAVQMSWPRLVNARYGARGKMSNQDLV
TRLKERGEKPVTTEYFLQQVIFVIPEAKRNAITGKRKAEAEASRKRYPGCDQAMSFAATMRDVAIKDLGRILAPELPEDW
KALVEKTKEGGTTGTRVTEKGVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKDGENPNEKKYIEELRKKAQIVNT
>Mature_315_residues
MMNFGKSALRGAAFAFAIFAVPMAVVPYAGQAFADSTVKIVVNKTPITNDDIARRVAFLKLQRQSGNLNEKAREQLVDEA
LKREEIARVKMSVSTQDVDAAFARFAGNNKMKPEQLTKVLAQAGVGAEHFKAFIAVQMSWPRLVNARYGARGKMSNQDLV
TRLKERGEKPVTTEYFLQQVIFVIPEAKRNAITGKRKAEAEASRKRYPGCDQAMSFAATMRDVAIKDLGRILAPELPEDW
KALVEKTKEGGTTGTRVTEKGVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKDGENPNEKKYIEELRKKAQIVNT

Specific function: Unknown

COG id: COG0760

COG function: function code O; Parvulin-like peptidyl-prolyl isomerase

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 35117; Mature: 35117

Theoretical pI: Translated: 10.19; Mature: 10.19

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.6 %Cys     (Translated Protein)
3.5 %Met     (Translated Protein)
4.1 %Cys+Met (Translated Protein)
0.6 %Cys     (Mature Protein)
3.5 %Met     (Mature Protein)
4.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MMNFGKSALRGAAFAFAIFAVPMAVVPYAGQAFADSTVKIVVNKTPITNDDIARRVAFLK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEECCCCCCHHHHHHHHHHH
LQRQSGNLNEKAREQLVDEALKREEIARVKMSVSTQDVDAAFARFAGNNKMKPEQLTKVL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHH
AQAGVGAEHFKAFIAVQMSWPRLVNARYGARGKMSNQDLVTRLKERGEKPVTTEYFLQQV
HHHCCCHHHHHHHHHHEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
IFVIPEAKRNAITGKRKAEAEASRKRYPGCDQAMSFAATMRDVAIKDLGRILAPELPEDW
HHHCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KALVEKTKEGGTTGTRVTEKGVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKDGENPNEK
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCCHH
KYIEELRKKAQIVNT
HHHHHHHHHHHHCCC
>Mature Secondary Structure
MMNFGKSALRGAAFAFAIFAVPMAVVPYAGQAFADSTVKIVVNKTPITNDDIARRVAFLK
CCCCCHHHHHHHHHHHHHHHHHHHHHCCCCCHHCCCEEEEEEECCCCCCHHHHHHHHHHH
LQRQSGNLNEKAREQLVDEALKREEIARVKMSVSTQDVDAAFARFAGNNKMKPEQLTKVL
HHHCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHCCCCCCCHHHHHHHH
AQAGVGAEHFKAFIAVQMSWPRLVNARYGARGKMSNQDLVTRLKERGEKPVTTEYFLQQV
HHHCCCHHHHHHHHHHEECCHHHHHCCCCCCCCCCCHHHHHHHHHCCCCCCCHHHHHHHH
IFVIPEAKRNAITGKRKAEAEASRKRYPGCDQAMSFAATMRDVAIKDLGRILAPELPEDW
HHHCCCHHHHHCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCHHH
KALVEKTKEGGTTGTRVTEKGVEYLAICKQRQVSDDYAAEMVFKSEDLMKAKDGENPNEK
HHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCCCHHHHHHHHHCCHHHHHHCCCCCCCHH
KYIEELRKKAQIVNT
HHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA