Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is mhqD [H]
Identifier: 15888442
GI number: 15888442
Start: 1091104
End: 1091727
Strand: Reverse
Name: mhqD [H]
Synonym: Atu1102
Alternate gene names: 15888442
Gene position: 1091727-1091104 (Counterclockwise)
Preceding gene: 15888443
Following gene: 159184612
Centisome position: 38.42
GC content: 57.21
Gene sequence:
>624_bases GTGGAGAGTGCCGGTTTTCACTATAAGCTCGATATTCCCGCCGGAACGCCCGATTGCGCTATCGTCCTGCTGCATGGATC GGGACGAACGGAAGATGACCTCATTTCTTTTGGCCGTGCCGTCTTTCCCACGGGTGCACTCTATGCGCCGAGAGGCGCTG TTGCCTGGGAGAATGGTTTCGCATTTTTTCGCAGAAAACCCGACAGAGAACTCGATATTGACGATCTGAAACATCAGGCA ACCAGACTGTGCCACTTCGTCGCCTTTGTGTTTCAGCAAACGGGGCGAAGACCGATTCTCGTCGGATATTCGAACGGCGC GATCATCGCGGCTGAAACGATATGTCAGGCGCATCACCTGTCCAAAGGCGCCATCCTGCTTCGCCCGTTATCTCCGAGGA AGGATCAATCTCTTCCGAACCTTGCGGGGTATCCCGTACTCCTGCTTGCGGGCGCCAGCGACGATCGGCGTCACCCCTCC GATGCTCCGCATTTGTCCGAGCAACTGACGTCAGCCGGCGCTGATGCCGTGCTGGAGACGATCAATACGGGCCATGGCTG GGCGGAAGACGCGGCAGACGAAAGATTGTCACGTCAATGGCTGGCACGCTTGCCTATCGCGTAA
Upstream 100 bases:
>100_bases AATTCGTGACGCTGGCGAACTGCCTGTAAATTCTGCACTTGCTCGCTGTTCCGAACGGCGCCAAGGGCTCGTGGATACCT GCGAATAGAGGAACAAGTGC
Downstream 100 bases:
>100_bases ATCAGAGCTTCGGCTCTTCCTCGAGCAATGACCGCACGAAGTCGAACATGCCGTGGCGGCGGTCGCGGCGGACGCGTTCG GCCTTGACGATCGCCTCTAT
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 207; Mature: 207
Protein sequence:
>207_residues MESAGFHYKLDIPAGTPDCAIVLLHGSGRTEDDLISFGRAVFPTGALYAPRGAVAWENGFAFFRRKPDRELDIDDLKHQA TRLCHFVAFVFQQTGRRPILVGYSNGAIIAAETICQAHHLSKGAILLRPLSPRKDQSLPNLAGYPVLLLAGASDDRRHPS DAPHLSEQLTSAGADAVLETINTGHGWAEDAADERLSRQWLARLPIA
Sequences:
>Translated_207_residues MESAGFHYKLDIPAGTPDCAIVLLHGSGRTEDDLISFGRAVFPTGALYAPRGAVAWENGFAFFRRKPDRELDIDDLKHQA TRLCHFVAFVFQQTGRRPILVGYSNGAIIAAETICQAHHLSKGAILLRPLSPRKDQSLPNLAGYPVLLLAGASDDRRHPS DAPHLSEQLTSAGADAVLETINTGHGWAEDAADERLSRQWLARLPIA >Mature_207_residues MESAGFHYKLDIPAGTPDCAIVLLHGSGRTEDDLISFGRAVFPTGALYAPRGAVAWENGFAFFRRKPDRELDIDDLKHQA TRLCHFVAFVFQQTGRRPILVGYSNGAIIAAETICQAHHLSKGAILLRPLSPRKDQSLPNLAGYPVLLLAGASDDRRHPS DAPHLSEQLTSAGADAVLETINTGHGWAEDAADERLSRQWLARLPIA
Specific function: Putative hydrolase that may contribute to the degradation of aromatic compounds (Potential) [H]
COG id: COG0400
COG function: function code R; Predicted esterase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: Belongs to the AB hydrolase 2 family [H]
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR003140 [H]
Pfam domain/function: PF02230 Abhydrolase_2 [H]
EC number: NA
Molecular weight: Translated: 22542; Mature: 22542
Theoretical pI: Translated: 6.79; Mature: 6.79
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.4 %Cys (Translated Protein) 0.5 %Met (Translated Protein) 1.9 %Cys+Met (Translated Protein) 1.4 %Cys (Mature Protein) 0.5 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MESAGFHYKLDIPAGTPDCAIVLLHGSGRTEDDLISFGRAVFPTGALYAPRGAVAWENGF CCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHCHHHCCCCCEECCCCCEEECCCE AFFRRKPDRELDIDDLKHQATRLCHFVAFVFQQTGRRPILVGYSNGAIIAAETICQAHHL EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHC SKGAILLRPLSPRKDQSLPNLAGYPVLLLAGASDDRRHPSDAPHLSEQLTSAGADAVLET CCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHH INTGHGWAEDAADERLSRQWLARLPIA HHCCCCCHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure MESAGFHYKLDIPAGTPDCAIVLLHGSGRTEDDLISFGRAVFPTGALYAPRGAVAWENGF CCCCCCEEEEECCCCCCCEEEEEEECCCCCHHHHHHHCHHHCCCCCEECCCCCEEECCCE AFFRRKPDRELDIDDLKHQATRLCHFVAFVFQQTGRRPILVGYSNGAIIAAETICQAHHL EEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCEEEEEECCCCEEHHHHHHHHHHC SKGAILLRPLSPRKDQSLPNLAGYPVLLLAGASDDRRHPSDAPHLSEQLTSAGADAVLET CCCEEEEECCCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCHHHHHHHHHCCHHHHHHH INTGHGWAEDAADERLSRQWLARLPIA HHCCCCCHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9734814; 9384377 [H]