Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is tauC [C]
Identifier: 15888390
GI number: 15888390
Start: 1042121
End: 1042939
Strand: Direct
Name: tauC [C]
Synonym: Atu1048
Alternate gene names: 15888390
Gene position: 1042121-1042939 (Clockwise)
Preceding gene: 159184593
Following gene: 159184596
Centisome position: 36.67
GC content: 58.49
Gene sequence:
>819_bases ATGAGCGCGATCATGGAAAGCTCTGTGGCGGCCGAACCGCGCAAGCCGCTGATTGAGCGGGTCAACTGGGTGAAGGCTGC GCCATGGCTTTATACGCTGGCGCTTTTCGCATTGTGGGAACTGCTCGTTTATGCGTTGAAAATGCCGCCAACTATTCTGC CGTCGCCGATCAGGGTCGGGCAGGTCATCGTGCAATATTGGTCGCCGATCTGGAAAAATTCGTTGCAGACGCTCTACACC ACGACACTGGGTTTTGCCATTGCCGTCGCCGCCGGTCTCGCTATCGGCCTGTTCATCGGCTGGTCGAAGACCATCTATGC GGGTCTTTATCCGCTGATGATCGGTTTTAACGCCATTCCGAAGGTGGCGCTGGTGCCCATCCTCGTCATCTGGTTCGGCA TCGGCACCGTTCCCGCCGTTCTGACCGCCTTCCTGATTTCCTTCTTTCCCATCGTCGTCAATGTCGCCACCGGGCTCGCC ACCATCGAGCCGGAGACCGAAGACGTGTTGCGCGCACTCGGCGCAAAGAAGATGGACATCATGCTGAAGGTCGGCATTCC GCGATCCATGCCCTATTTCTTCGGGTCGCTGAAAATCGCCATCACGCTCGCCTTCGTCGGCTCGGTCGTCTCGGAAACCG TCGCCTCCAATTACGGCCTCGGCAATATGATGAGTTCGGCGCAGAGCCAGTTTAACGTGCCGCTGGTCTTTGCAGGCCTG CTGATGCTCGCGGTGGAGGGTATTGCCATGTATGCGGTCATGGCCTGGCTTGAAAAGCGCATGACCGGCTGGGCCCATCG TTCGACCATGGGGCAGTGA
Upstream 100 bases:
>100_bases CGTTCGCCCGTCCGCGCCAGCTCGATATCATGTATGACAAGGGTTTCAACGACATGGTGCAGGAACTGCATGGCGAAATC GCGCAGGCGAGGGTGGCGGC
Downstream 100 bases:
>100_bases GAGATGCAGCACGGGCGCAAAAAACACCCATGCTGACCATGGGGTGCAAAATTAATGCGCCGCCATTTCCTCAACGATGT CAGCGCCGTCCATTAGGAAG
Product: ABC transporter, membrane spanning protein
Products: taurine [Cytoplasm]; ADP; phosphate [C]
Alternate protein names: NA
Number of amino acids: Translated: 272; Mature: 271
Protein sequence:
>272_residues MSAIMESSVAAEPRKPLIERVNWVKAAPWLYTLALFALWELLVYALKMPPTILPSPIRVGQVIVQYWSPIWKNSLQTLYT TTLGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIPKVALVPILVIWFGIGTVPAVLTAFLISFFPIVVNVATGLA TIEPETEDVLRALGAKKMDIMLKVGIPRSMPYFFGSLKIAITLAFVGSVVSETVASNYGLGNMMSSAQSQFNVPLVFAGL LMLAVEGIAMYAVMAWLEKRMTGWAHRSTMGQ
Sequences:
>Translated_272_residues MSAIMESSVAAEPRKPLIERVNWVKAAPWLYTLALFALWELLVYALKMPPTILPSPIRVGQVIVQYWSPIWKNSLQTLYT TTLGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIPKVALVPILVIWFGIGTVPAVLTAFLISFFPIVVNVATGLA TIEPETEDVLRALGAKKMDIMLKVGIPRSMPYFFGSLKIAITLAFVGSVVSETVASNYGLGNMMSSAQSQFNVPLVFAGL LMLAVEGIAMYAVMAWLEKRMTGWAHRSTMGQ >Mature_271_residues SAIMESSVAAEPRKPLIERVNWVKAAPWLYTLALFALWELLVYALKMPPTILPSPIRVGQVIVQYWSPIWKNSLQTLYTT TLGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIPKVALVPILVIWFGIGTVPAVLTAFLISFFPIVVNVATGLAT IEPETEDVLRALGAKKMDIMLKVGIPRSMPYFFGSLKIAITLAFVGSVVSETVASNYGLGNMMSSAQSQFNVPLVFAGLL MLAVEGIAMYAVMAWLEKRMTGWAHRSTMGQ
Specific function: Probably part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG0600
COG function: function code P; ABC-type nitrate/sulfonate/bicarbonate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI1786564, Length=222, Percent_Identity=26.1261261261261, Blast_Score=81, Evalue=6e-17, Organism=Escherichia coli, GI87081802, Length=229, Percent_Identity=24.4541484716157, Blast_Score=72, Evalue=4e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 29608; Mature: 29477
Theoretical pI: Translated: 9.94; Mature: 9.94
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 5.1 %Met (Translated Protein) 5.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAIMESSVAAEPRKPLIERVNWVKAAPWLYTLALFALWELLVYALKMPPTILPSPIRVG CCCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH QVIVQYWSPIWKNSLQTLYTTTLGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH KVALVPILVIWFGIGTVPAVLTAFLISFFPIVVNVATGLATIEPETEDVLRALGAKKMDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHEE MLKVGIPRSMPYFFGSLKIAITLAFVGSVVSETVASNYGLGNMMSSAQSQFNVPLVFAGL EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH LMLAVEGIAMYAVMAWLEKRMTGWAHRSTMGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC >Mature Secondary Structure SAIMESSVAAEPRKPLIERVNWVKAAPWLYTLALFALWELLVYALKMPPTILPSPIRVG CCHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHH QVIVQYWSPIWKNSLQTLYTTTLGFAIAVAAGLAIGLFIGWSKTIYAGLYPLMIGFNAIP HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCH KVALVPILVIWFGIGTVPAVLTAFLISFFPIVVNVATGLATIEPETEDVLRALGAKKMDI HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHCCCHHEE MLKVGIPRSMPYFFGSLKIAITLAFVGSVVSETVASNYGLGNMMSSAQSQFNVPLVFAGL EEEECCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCCHHHHHHH LMLAVEGIAMYAVMAWLEKRMTGWAHRSTMGQ HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: taurine [Periplasm]; ATP; H2O [C]
Specific reaction: taurine [Periplasm] + ATP + H2O = taurine [Cytoplasm] + ADP + phosphate [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7542800 [H]