Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888374
Identifier: 15888374
GI number: 15888374
Start: 1025506
End: 1026084
Strand: Direct
Name: 15888374
Synonym: Atu1032
Alternate gene names: NA
Gene position: 1025506-1026084 (Clockwise)
Preceding gene: 159184587
Following gene: 15888375
Centisome position: 36.09
GC content: 59.07
Gene sequence:
>579_bases ATGCCATTTCGTCGCCGTGAACCCGTTGGTTTTTCAGAGAAGATTCGTGACCTCTTCTGGCCGCGCACGGGTTTTTCCCG TTCGCTGCGCTATATGAAGCTGCGTCTGCTCAGGCTTTCCGCTTCTCCCCATTCGGTTGCCGCCGGTGTCGCCATCGGTG TGGGCGTGGCGTGGACACCCTTTCTCGGTGTCCACATCGTCATCGCCATGGCGCTCGGTTTCCTCCTGCGCGTCAATCTC GTGGCAGCCGCGCTCGGCACCACCTTCGCCAATCCGCTGACATTTCCGTTTATCTGGGCATCCACCTGGGAACTGGGCCA CTTCATCCTCGGCCGGCAGAAGACGGCAAGTGTGGGGCATGTGGATTTCGTTGCGCTGTTCAGCCATCTCGAATTCCGGC AGATATGGACGCCGGTTCTGGAACCCATGACCATCGGCGCGGTCTTTCCCGCCGCCATCAGCGCTGTCATTACCTATATC GCCGTCTACGGCCTCATCAGCGGCTTCCAGCGGCGCAAGATGGAAAATCTCGCCCACCGCGCCGCCAATAAGAATGCTTC TCTGGAGATGTTGAAATGA
Upstream 100 bases:
>100_bases GCTCAACGCCGGAACGACGGCGAGAAGAATGTCCGGCAAAAGTTCTTTGCCGTCTACCAACCTCTTGGCGCGGCCCGGGC GATGAAATAAACTGCACCCC
Downstream 100 bases:
>100_bases TCATTGGATTGGGCAGCGACCTGATCGACATCCGCCGCGTCGAAAAGTCGATCGAGCGTTTCGGCGAACGTTTCACGCAT CGCTGTTTCACCGATATAGA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 192; Mature: 191
Protein sequence:
>192_residues MPFRRREPVGFSEKIRDLFWPRTGFSRSLRYMKLRLLRLSASPHSVAAGVAIGVGVAWTPFLGVHIVIAMALGFLLRVNL VAAALGTTFANPLTFPFIWASTWELGHFILGRQKTASVGHVDFVALFSHLEFRQIWTPVLEPMTIGAVFPAAISAVITYI AVYGLISGFQRRKMENLAHRAANKNASLEMLK
Sequences:
>Translated_192_residues MPFRRREPVGFSEKIRDLFWPRTGFSRSLRYMKLRLLRLSASPHSVAAGVAIGVGVAWTPFLGVHIVIAMALGFLLRVNL VAAALGTTFANPLTFPFIWASTWELGHFILGRQKTASVGHVDFVALFSHLEFRQIWTPVLEPMTIGAVFPAAISAVITYI AVYGLISGFQRRKMENLAHRAANKNASLEMLK >Mature_191_residues PFRRREPVGFSEKIRDLFWPRTGFSRSLRYMKLRLLRLSASPHSVAAGVAIGVGVAWTPFLGVHIVIAMALGFLLRVNLV AAALGTTFANPLTFPFIWASTWELGHFILGRQKTASVGHVDFVALFSHLEFRQIWTPVLEPMTIGAVFPAAISAVITYIA VYGLISGFQRRKMENLAHRAANKNASLEMLK
Specific function: Unknown
COG id: COG3216
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 21352; Mature: 21220
Theoretical pI: Translated: 11.82; Mature: 11.82
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 3.1 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 2.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPFRRREPVGFSEKIRDLFWPRTGFSRSLRYMKLRLLRLSASPHSVAAGVAIGVGVAWTP CCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH FLGVHIVIAMALGFLLRVNLVAAALGTTFANPLTFPFIWASTWELGHFILGRQKTASVGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH VDFVALFSHLEFRQIWTPVLEPMTIGAVFPAAISAVITYIAVYGLISGFQRRKMENLAHR HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AANKNASLEMLK HHCCCCCEEECC >Mature Secondary Structure PFRRREPVGFSEKIRDLFWPRTGFSRSLRYMKLRLLRLSASPHSVAAGVAIGVGVAWTP CCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHHHHHHHHCCCCHHHHHHHHHHCCHHHHH FLGVHIVIAMALGFLLRVNLVAAALGTTFANPLTFPFIWASTWELGHFILGRQKTASVGH HHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCCCCH VDFVALFSHLEFRQIWTPVLEPMTIGAVFPAAISAVITYIAVYGLISGFQRRKMENLAHR HHHHHHHHHHHHHHHHHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH AANKNASLEMLK HHCCCCCEEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA