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The map label for this gene is mcpV [H]

Identifier: 15888368

GI number: 15888368

Start: 1019464

End: 1020963

Strand: Reverse

Name: mcpV [H]

Synonym: Atu1027

Alternate gene names: 15888368

Gene position: 1020963-1019464 (Counterclockwise)

Preceding gene: 159184584

Following gene: 159184580

Centisome position: 35.93

GC content: 59.27

Gene sequence:

>1500_bases
ATGCACGGCCAAGCAAAAACCGACCGACAACTTGATGAACGACTGAATTTTCTGGGGCTTGGCCACGGTGAGCGGCAAAA
TCTTTCAGATATGAAGGGTGTGATCACCGGTTCACTCGATGCGTCTCTCGATCGTTTTTATACAAAGGTTCGCGCGGTGC
CAGAGACCGCGAAGTTTTTCTCCAGCGAGGCCCATATCCACCACGCCAAGAGCATGCAGCTCAAACATTGGTCCAGGATC
GCCTCCGGCACGTTCAACGAGGATTACACCAATGCGGTGACCGCCATCGGCCGCACCCATGCAAGGCTGGGGCTGGAGCC
GAGATGGTACATCGGCGGTTATGCCCTGATGCTCGACGGCATCGTCAAGGCGGTGATCGAGTCCGAATTGAAAGGCCTTT
TCATGGAAAAGAAGGCGAAGAAGGTGAAGGACGCCCTCTCCGCCACCATCAAGGCCGCCCTTCTCGACATGGATTATTCG
ATCTCCGTCTATCTCGACGTGCTCGCCACCGAACGGCAAAAGGTGGAGGCCGAGCAGGCGCAGATGAAGAAGGAGCAGGA
TCACGTTCTCGAGCTGCTCAACAACGCTCTCGACCGGCTGGCCAATGGCGATCTCACCTCCAGCATCGCCGAAAAGACCG
CGCCGCAATTCGAAGGGCTGATCGCCAATTTCAATGCCGCGGTCGGCAATCTCTCCGGCGCCTTTGCGCAGATCGTCGAA
GAGGCCAACAAGATTTCCGGCAACACGCGTGAGCTGACCGCCGCGACCGACGACATGGCCCGCCGCACGGAGCAGCAGGC
CGCCGCGCTGGAGGAAACCGCCGCCGCCGTCGAGGAAATCACCACCATTTCCAAACTCTCGGCGCAGCGTTCCGAAGAGG
CCAAGGCCATCGTCGAAAGCTCGGCCGTGGAGGCGGCGCGCTCGCGCGATGTGGTGACGGATGCGGTGAAGGCGATGGGC
GCGATCGAGGAATCGTCGCAGAAGATCACCCAGATCATTTCCGTCATCGACGAGATTTCATTCCAGACCAATCTTCTGGC
GCTGAATGCCGGCGTGGAAGCCGCACGCGCCGGTGAGGCCGGCAAGGGTTTCGCCGTCGTCGCCCAGGAAGTGCGCGAGC
TCGCGCAGCGCTCCGCCAACGCCGCCAAGGAAATCAAGACGCTGATTGCCAAGTCTTCCGAGGATGTGACGCAGGGCGTT
TCGCTGGTCAACAAGACGGGCGAATCCTTGAATACGATCGGTAACAAGGTCGATCACATCAAGGATCACATTACCTCGCT
AACCAAAGCGGCGCAGGAACAGTCGGTCGGCATTCAGGAAATCAGTGCGGCGATCAACAGCATGGACAATCTGACCCAGA
AGAACGCGGCGATGGTGGAAGAAACCAATGCGGCCACGCATAATCTGAGCGATGTCAGCGCCAATCTGGCGGCGCTTGTG
AGCCGGTTCAGCGTTTCGGCAACGCGGGCGCATGTGGAGCGGACCTATCGGGCTGCTTGA

Upstream 100 bases:

>100_bases
CCGGCCAGTCGAAATTATATCTTGGTTAATTTTAGACGTGTCTAAATCACGCAAAGACACCAGCGACATGAATTGGGGTG
TCAGAGCAGGATGACTAGAC

Downstream 100 bases:

>100_bases
AAGACAACAGAGGCGCATTTCCCTCGTCATTGCGGCCTTGAACCACTGCTGCCCGGTTTAATTTTTTGAACGTCGACGTA
TCCACTCAACGTCATCCTCG

Product: methyl-accepting chemotaxis protein

Products: NA

Alternate protein names: Methyl-accepting chemotaxis protein [H]

Number of amino acids: Translated: 499; Mature: 499

Protein sequence:

>499_residues
MHGQAKTDRQLDERLNFLGLGHGERQNLSDMKGVITGSLDASLDRFYTKVRAVPETAKFFSSEAHIHHAKSMQLKHWSRI
ASGTFNEDYTNAVTAIGRTHARLGLEPRWYIGGYALMLDGIVKAVIESELKGLFMEKKAKKVKDALSATIKAALLDMDYS
ISVYLDVLATERQKVEAEQAQMKKEQDHVLELLNNALDRLANGDLTSSIAEKTAPQFEGLIANFNAAVGNLSGAFAQIVE
EANKISGNTRELTAATDDMARRTEQQAAALEETAAAVEEITTISKLSAQRSEEAKAIVESSAVEAARSRDVVTDAVKAMG
AIEESSQKITQIISVIDEISFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKEIKTLIAKSSEDVTQGV
SLVNKTGESLNTIGNKVDHIKDHITSLTKAAQEQSVGIQEISAAINSMDNLTQKNAAMVEETNAATHNLSDVSANLAALV
SRFSVSATRAHVERTYRAA

Sequences:

>Translated_499_residues
MHGQAKTDRQLDERLNFLGLGHGERQNLSDMKGVITGSLDASLDRFYTKVRAVPETAKFFSSEAHIHHAKSMQLKHWSRI
ASGTFNEDYTNAVTAIGRTHARLGLEPRWYIGGYALMLDGIVKAVIESELKGLFMEKKAKKVKDALSATIKAALLDMDYS
ISVYLDVLATERQKVEAEQAQMKKEQDHVLELLNNALDRLANGDLTSSIAEKTAPQFEGLIANFNAAVGNLSGAFAQIVE
EANKISGNTRELTAATDDMARRTEQQAAALEETAAAVEEITTISKLSAQRSEEAKAIVESSAVEAARSRDVVTDAVKAMG
AIEESSQKITQIISVIDEISFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKEIKTLIAKSSEDVTQGV
SLVNKTGESLNTIGNKVDHIKDHITSLTKAAQEQSVGIQEISAAINSMDNLTQKNAAMVEETNAATHNLSDVSANLAALV
SRFSVSATRAHVERTYRAA
>Mature_499_residues
MHGQAKTDRQLDERLNFLGLGHGERQNLSDMKGVITGSLDASLDRFYTKVRAVPETAKFFSSEAHIHHAKSMQLKHWSRI
ASGTFNEDYTNAVTAIGRTHARLGLEPRWYIGGYALMLDGIVKAVIESELKGLFMEKKAKKVKDALSATIKAALLDMDYS
ISVYLDVLATERQKVEAEQAQMKKEQDHVLELLNNALDRLANGDLTSSIAEKTAPQFEGLIANFNAAVGNLSGAFAQIVE
EANKISGNTRELTAATDDMARRTEQQAAALEETAAAVEEITTISKLSAQRSEEAKAIVESSAVEAARSRDVVTDAVKAMG
AIEESSQKITQIISVIDEISFQTNLLALNAGVEAARAGEAGKGFAVVAQEVRELAQRSANAAKEIKTLIAKSSEDVTQGV
SLVNKTGESLNTIGNKVDHIKDHITSLTKAAQEQSVGIQEISAAINSMDNLTQKNAAMVEETNAATHNLSDVSANLAALV
SRFSVSATRAHVERTYRAA

Specific function: Chemotactic-signal transducers respond to changes in the concentration of attractants and repellents in the environment, transduce a signal from the outside to the inside of the cell, and facilitate sensory adaptation through the variation of the level of

COG id: COG0840

COG function: function code NT; Methyl-accepting chemotaxis protein

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein. Note=Localized at the flagellum-bearing pole of the swarmer cell [H]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 methyl-accepting transducer domain [H]

Homologues:

Organism=Escherichia coli, GI1788195, Length=259, Percent_Identity=46.3320463320463, Blast_Score=195, Evalue=5e-51,
Organism=Escherichia coli, GI1787690, Length=287, Percent_Identity=40.418118466899, Blast_Score=187, Evalue=1e-48,
Organism=Escherichia coli, GI1788194, Length=296, Percent_Identity=39.1891891891892, Blast_Score=185, Evalue=5e-48,
Organism=Escherichia coli, GI2367378, Length=263, Percent_Identity=43.3460076045627, Blast_Score=184, Evalue=1e-47,
Organism=Escherichia coli, GI1789453, Length=222, Percent_Identity=36.036036036036, Blast_Score=138, Evalue=1e-33,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR004090
- InterPro:   IPR004089
- InterPro:   IPR003660 [H]

Pfam domain/function: PF00672 HAMP; PF00015 MCPsignal [H]

EC number: NA

Molecular weight: Translated: 53809; Mature: 53809

Theoretical pI: Translated: 5.82; Mature: 5.82

Prosite motif: PS50885 HAMP ; PS50111 CHEMOTAXIS_TRANSDUC_2

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHGQAKTDRQLDERLNFLGLGHGERQNLSDMKGVITGSLDASLDRFYTKVRAVPETAKFF
CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHH
SSEAHIHHAKSMQLKHWSRIASGTFNEDYTNAVTAIGRTHARLGLEPRWYIGGYALMLDG
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
IVKAVIESELKGLFMEKKAKKVKDALSATIKAALLDMDYSISVYLDVLATERQKVEAEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QMKKEQDHVLELLNNALDRLANGDLTSSIAEKTAPQFEGLIANFNAAVGNLSGAFAQIVE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHH
EANKISGNTRELTAATDDMARRTEQQAAALEETAAAVEEITTISKLSAQRSEEAKAIVES
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVEAARSRDVVTDAVKAMGAIEESSQKITQIISVIDEISFQTNLLALNAGVEAARAGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHCCCC
GKGFAVVAQEVRELAQRSANAAKEIKTLIAKSSEDVTQGVSLVNKTGESLNTIGNKVDHI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
KDHITSLTKAAQEQSVGIQEISAAINSMDNLTQKNAAMVEETNAATHNLSDVSANLAALV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHH
SRFSVSATRAHVERTYRAA
HHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHGQAKTDRQLDERLNFLGLGHGERQNLSDMKGVITGSLDASLDRFYTKVRAVPETAKFF
CCCCCCCHHHHHHHHHHHCCCCCCCCCHHHHHHHHCCCHHHHHHHHHHHHHCCHHHHHHH
SSEAHIHHAKSMQLKHWSRIASGTFNEDYTNAVTAIGRTHARLGLEPRWYIGGYALMLDG
CCHHHHHHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHCCCCCCEEHHHHHHHHHH
IVKAVIESELKGLFMEKKAKKVKDALSATIKAALLDMDYSISVYLDVLATERQKVEAEQA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHHHHHH
QMKKEQDHVLELLNNALDRLANGDLTSSIAEKTAPQFEGLIANFNAAVGNLSGAFAQIVE
HHHHHHHHHHHHHHHHHHHHCCCCHHHHHHHHCCHHHHHHHHHHHHHHHCHHHHHHHHHH
EANKISGNTRELTAATDDMARRTEQQAAALEETAAAVEEITTISKLSAQRSEEAKAIVES
HHHHCCCCCCEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
SAVEAARSRDVVTDAVKAMGAIEESSQKITQIISVIDEISFQTNLLALNAGVEAARAGEA
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCEEEEECCCHHHHCCCC
GKGFAVVAQEVRELAQRSANAAKEIKTLIAKSSEDVTQGVSLVNKTGESLNTIGNKVDHI
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHCCHHHHHHHHHHHHH
KDHITSLTKAAQEQSVGIQEISAAINSMDNLTQKNAAMVEETNAATHNLSDVSANLAALV
HHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHCCHHHHHHHHHHHH
SRFSVSATRAHVERTYRAA
HHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 1577276; 11259647 [H]