Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888334
Identifier: 15888334
GI number: 15888334
Start: 986763
End: 987683
Strand: Direct
Name: 15888334
Synonym: Atu0991
Alternate gene names: NA
Gene position: 986763-987683 (Clockwise)
Preceding gene: 159184564
Following gene: 15888336
Centisome position: 34.73
GC content: 61.02
Gene sequence:
>921_bases ATGACAGAACAATCCCTGCTGAAATTCTCCATTGCCGTCACGGTTGTCCTGGCGCTGTTCGGCATTGGCGCGGGCCTGTT TTCCGGCTCGTTCGCGGTTGTTTTCGACGGTGTTTATGCGCTCACCGATGCTTTCATGACGGTGCTGGCGCTGCTTGTGG CGCGGTTGATTGCCGCTTCCGCAGCACCCAGGCCCGGTGGCCGCCTGGCGGAACGTTTCACCATGGGTTTCTGGCATCTG GAGCCGATGGTGCTCGGCCTCAACGGCACGCTGTTGATGGGGGCGGCGATCTATGCGCTCATCAATGCCATCGATAGCCT GATGGATGGCGGACGCTCGATCGAGTTCGATTACGCCATCATCGTCACTTTCGTCAGCTTTACCGTCTCACTCGCCATGG CATGGTTCGTCAAACGGCAAAACCGCAGGCTGAAATCCGCTTTCGTGGCGCTGGATGCCAAAAGCTGGCTGATGAGTGCG CTTCTGAGCATGGCGCTGTTCGTCGCCTTCGCCATCGGCTACGGCCTCACGGGCACGTCGCAAGCTTGGCTCGCGCCCTA TATCGACCCGGCCGTGCTGGCGCTGGTCTGCCTCGTCATCATCCCCATGCCGCTCGGCAATGTGAAACAGGCGCTTGCCG ACATTCTTCTGGTGACGCCGCTGGAGTTCAAGCAGCATGTGGACGGCGTGGCAGGTGAGATCGTGACGAAATTCGGCTTT GCTTCGCACTATTCCTACGTCGCCCGTGTCGGCCGCGGCCGGCAGATCGAGCTCTTCTTCATTGTCCCGAAGAACTGGCC GGCCCGGCGCCTGGAGGAGTGGGACGCGATCCGCGACGAGATCGGCAATGCGCTCGGCGGCGAGGGGAGTGACCGCTGGC TGACGATCGTGTTCACGACGGATGAGGAATGGGCAGTTTGA
Upstream 100 bases:
>100_bases GAAATGCGACAAAACAAAGAGTTAGAGATTTTTCGCCACGCGCAGAAACGCGAAAAACCTCTATAAGGCGGTTTCTGCTT TTGAAGGTCAAATACACGTC
Downstream 100 bases:
>100_bases ATGCTCCGTGCGTCAGCCTCAGTAGAACTGTATTTCACGGTGCTGTAGCCGCTCTGCGATCTCCCGCCAAATACCAGGCT ACAGACATTATCACGATGCC
Product: cation efflux system component
Products: NA
Alternate protein names: Cation Efflux Protein; Co/Zn/Cd Cation Transporter; Cation Transporter-Like Membrane Protein; Cation Efflux Transmembrane Protein; Cobalt-Zinc-Cadmium Resistance Protein; Cation Efflux System Protein; Cation Efflux Transporter Protein; Cation Efflux System Component; Cation Efflux Family Protein
Number of amino acids: Translated: 306; Mature: 305
Protein sequence:
>306_residues MTEQSLLKFSIAVTVVLALFGIGAGLFSGSFAVVFDGVYALTDAFMTVLALLVARLIAASAAPRPGGRLAERFTMGFWHL EPMVLGLNGTLLMGAAIYALINAIDSLMDGGRSIEFDYAIIVTFVSFTVSLAMAWFVKRQNRRLKSAFVALDAKSWLMSA LLSMALFVAFAIGYGLTGTSQAWLAPYIDPAVLALVCLVIIPMPLGNVKQALADILLVTPLEFKQHVDGVAGEIVTKFGF ASHYSYVARVGRGRQIELFFIVPKNWPARRLEEWDAIRDEIGNALGGEGSDRWLTIVFTTDEEWAV
Sequences:
>Translated_306_residues MTEQSLLKFSIAVTVVLALFGIGAGLFSGSFAVVFDGVYALTDAFMTVLALLVARLIAASAAPRPGGRLAERFTMGFWHL EPMVLGLNGTLLMGAAIYALINAIDSLMDGGRSIEFDYAIIVTFVSFTVSLAMAWFVKRQNRRLKSAFVALDAKSWLMSA LLSMALFVAFAIGYGLTGTSQAWLAPYIDPAVLALVCLVIIPMPLGNVKQALADILLVTPLEFKQHVDGVAGEIVTKFGF ASHYSYVARVGRGRQIELFFIVPKNWPARRLEEWDAIRDEIGNALGGEGSDRWLTIVFTTDEEWAV >Mature_305_residues TEQSLLKFSIAVTVVLALFGIGAGLFSGSFAVVFDGVYALTDAFMTVLALLVARLIAASAAPRPGGRLAERFTMGFWHLE PMVLGLNGTLLMGAAIYALINAIDSLMDGGRSIEFDYAIIVTFVSFTVSLAMAWFVKRQNRRLKSAFVALDAKSWLMSAL LSMALFVAFAIGYGLTGTSQAWLAPYIDPAVLALVCLVIIPMPLGNVKQALADILLVTPLEFKQHVDGVAGEIVTKFGFA SHYSYVARVGRGRQIELFFIVPKNWPARRLEEWDAIRDEIGNALGGEGSDRWLTIVFTTDEEWAV
Specific function: Unknown
COG id: COG3965
COG function: function code P; Predicted Co/Zn/Cd cation transporters
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 33310; Mature: 33179
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 3.3 %Met (Translated Protein) 3.6 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 3.3 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTEQSLLKFSIAVTVVLALFGIGAGLFSGSFAVVFDGVYALTDAFMTVLALLVARLIAAS CCCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AAPRPGGRLAERFTMGFWHLEPMVLGLNGTLLMGAAIYALINAIDSLMDGGRSIEFDYAI CCCCCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHH IVTFVSFTVSLAMAWFVKRQNRRLKSAFVALDAKSWLMSALLSMALFVAFAIGYGLTGTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QAWLAPYIDPAVLALVCLVIIPMPLGNVKQALADILLVTPLEFKQHVDGVAGEIVTKFGF CCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHH ASHYSYVARVGRGRQIELFFIVPKNWPARRLEEWDAIRDEIGNALGGEGSDRWLTIVFTT HHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC DEEWAV CCCCCC >Mature Secondary Structure TEQSLLKFSIAVTVVLALFGIGAGLFSGSFAVVFDGVYALTDAFMTVLALLVARLIAAS CCHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC AAPRPGGRLAERFTMGFWHLEPMVLGLNGTLLMGAAIYALINAIDSLMDGGRSIEFDYAI CCCCCCHHHHHHHHHHHHHHCCEEECCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEHHHH IVTFVSFTVSLAMAWFVKRQNRRLKSAFVALDAKSWLMSALLSMALFVAFAIGYGLTGTS HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC QAWLAPYIDPAVLALVCLVIIPMPLGNVKQALADILLVTPLEFKQHVDGVAGEIVTKFGF CCHHCCCCCHHHHHHHHHHHHCCCCCHHHHHHHHHHHHCCHHHHHHHCHHHHHHHHHHHH ASHYSYVARVGRGRQIELFFIVPKNWPARRLEEWDAIRDEIGNALGGEGSDRWLTIVFTT HHHHHHHHHHCCCCEEEEEEEECCCCCHHHHHHHHHHHHHHHHHCCCCCCCCEEEEEEEC DEEWAV CCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA