Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15888237

Identifier: 15888237

GI number: 15888237

Start: 889694

End: 890095

Strand: Direct

Name: 15888237

Synonym: Atu0898

Alternate gene names: NA

Gene position: 889694-890095 (Clockwise)

Preceding gene: 159184519

Following gene: 159184522

Centisome position: 31.31

GC content: 53.23

Gene sequence:

>402_bases
ATGCGAAAGTTCCTTCCCGCTGCTCTTTCTGCGTTTTTCCTTGCCTTACAGGCCTTTACACCCGCTTTCGCAATAGACGC
CAACGTCATGAGGCAGCTGAACGTGCTCGCCCCCGAGGAGCGTCTGGAGCAGCGTTGCGATATAGAGGCGATGGAGCGGA
TCGCGACCGAGCAGAAAGGTATGAAGCCGGATAAGGTCATTGCCTATACTTTCGGTGATCCCGAGGTTGGCAAGAATTCG
ATCAAGGCGTCGGGTGCAGTCTTCAGAAGCGCCGGTGAATGGTACAAGCTCAAATACAAGTGCCAGCTGAAAAGCGACAG
CCTCTCCATCCAGTCCTTCGATTACCGTGTCGGCGACAAGATTCCCGAAGAGCAGTGGAAGAAGTTGTATCTTTATGACT
GA

Upstream 100 bases:

>100_bases
TCGATCACATTTTGGCAATATCCGGCAAATCAGCGATGATGCGCGCCTGCCACCGGCCTGCCGTCCATCGATAAGAACAA
ACGAAAACTGACAGGATCCC

Downstream 100 bases:

>100_bases
CCGCCGAAATTTTCGGCGTCTTGAGGAAGTTTAGCCCCGCTTTTCTTGCCGCTCCGCCAGTGGCTCTGTAACCCTGCTTG
CCGATCAAAGCGAGGGAGAC

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 133; Mature: 133

Protein sequence:

>133_residues
MRKFLPAALSAFFLALQAFTPAFAIDANVMRQLNVLAPEERLEQRCDIEAMERIATEQKGMKPDKVIAYTFGDPEVGKNS
IKASGAVFRSAGEWYKLKYKCQLKSDSLSIQSFDYRVGDKIPEEQWKKLYLYD

Sequences:

>Translated_133_residues
MRKFLPAALSAFFLALQAFTPAFAIDANVMRQLNVLAPEERLEQRCDIEAMERIATEQKGMKPDKVIAYTFGDPEVGKNS
IKASGAVFRSAGEWYKLKYKCQLKSDSLSIQSFDYRVGDKIPEEQWKKLYLYD
>Mature_133_residues
MRKFLPAALSAFFLALQAFTPAFAIDANVMRQLNVLAPEERLEQRCDIEAMERIATEQKGMKPDKVIAYTFGDPEVGKNS
IKASGAVFRSAGEWYKLKYKCQLKSDSLSIQSFDYRVGDKIPEEQWKKLYLYD

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15225; Mature: 15225

Theoretical pI: Translated: 8.65; Mature: 8.65

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.0 %Met     (Translated Protein)
4.5 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
3.0 %Met     (Mature Protein)
4.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MRKFLPAALSAFFLALQAFTPAFAIDANVMRQLNVLAPEERLEQRCDIEAMERIATEQKG
CCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCC
MKPDKVIAYTFGDPEVGKNSIKASGAVFRSAGEWYKLKYKCQLKSDSLSIQSFDYRVGDK
CCCCCEEEEECCCCCCCCCCHHCCCHHHHCCCCEEEEEEEEEECCCCCEEEECCCCCCCC
IPEEQWKKLYLYD
CCHHHHCEECCCC
>Mature Secondary Structure
MRKFLPAALSAFFLALQAFTPAFAIDANVMRQLNVLAPEERLEQRCDIEAMERIATEQKG
CCCHHHHHHHHHHHHHHHHCCHHHCCHHHHHHHHCCCCHHHHHHHCCHHHHHHHHHHHCC
MKPDKVIAYTFGDPEVGKNSIKASGAVFRSAGEWYKLKYKCQLKSDSLSIQSFDYRVGDK
CCCCCEEEEECCCCCCCCCCHHCCCHHHHCCCCEEEEEEEEEECCCCCEEEECCCCCCCC
IPEEQWKKLYLYD
CCHHHHCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA