Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is 15888232
Identifier: 15888232
GI number: 15888232
Start: 882945
End: 883232
Strand: Reverse
Name: 15888232
Synonym: Atu0892
Alternate gene names: NA
Gene position: 883232-882945 (Counterclockwise)
Preceding gene: 159184520
Following gene: 15888228
Centisome position: 31.08
GC content: 59.03
Gene sequence:
>288_bases ATGCAGATCGAAAGCAATATTGGCGGATATAATTATCAGGGTCGCATCCGCGACCTCGAAAAAGCTGGCAGCGCGCAAAG CACGCCGGAGGAGCAGGCCGTAAAACGCGGTCCCGGCAACCCGACCGTTTCCAGCACCATTCTTTCCCAGTCACTGGCCA ATGTGCTGTGGGCTGTTGGCAATGGCAGCGCCCCCGCCTATCAGGATACGCCGGCCGCCTCCGCCGAAGACAAGGCGGAA GCACAGGCAGAATGGGTGCGTGGCGCCTATTCGGAATATACCGAATAG
Upstream 100 bases:
>100_bases ACTGTCAACCCTCGACCGTCATTGCAGCGCAGCAGACGCAAGCTTCAGACAAGTCGCCGCCGTTAACTATTCGTTAACTT TTGAACGCGGAATCACCCAA
Downstream 100 bases:
>100_bases GCGAGTCCCATTAGGCACTTGCCGGGCTGACTTCCACTGTCACATGCGACAGTTCATGTATGGCGGCAAGTTTCTGTTTA TAAAAGGCCGGCGCTTTCGG
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 95; Mature: 95
Protein sequence:
>95_residues MQIESNIGGYNYQGRIRDLEKAGSAQSTPEEQAVKRGPGNPTVSSTILSQSLANVLWAVGNGSAPAYQDTPAASAEDKAE AQAEWVRGAYSEYTE
Sequences:
>Translated_95_residues MQIESNIGGYNYQGRIRDLEKAGSAQSTPEEQAVKRGPGNPTVSSTILSQSLANVLWAVGNGSAPAYQDTPAASAEDKAE AQAEWVRGAYSEYTE >Mature_95_residues MQIESNIGGYNYQGRIRDLEKAGSAQSTPEEQAVKRGPGNPTVSSTILSQSLANVLWAVGNGSAPAYQDTPAASAEDKAE AQAEWVRGAYSEYTE
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 10093; Mature: 10093
Theoretical pI: Translated: 4.23; Mature: 4.23
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.1 %Met (Translated Protein) 1.1 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.1 %Met (Mature Protein) 1.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQIESNIGGYNYQGRIRDLEKAGSAQSTPEEQAVKRGPGNPTVSSTILSQSLANVLWAVG CCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC NGSAPAYQDTPAASAEDKAEAQAEWVRGAYSEYTE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC >Mature Secondary Structure MQIESNIGGYNYQGRIRDLEKAGSAQSTPEEQAVKRGPGNPTVSSTILSQSLANVLWAVG CCCCCCCCCCCCCCHHHHHHHCCCCCCCCHHHHHHCCCCCCCHHHHHHHHHHHHHHHHCC NGSAPAYQDTPAASAEDKAEAQAEWVRGAYSEYTE CCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA