Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cysW [H]
Identifier: 15888163
GI number: 15888163
Start: 820238
End: 821110
Strand: Direct
Name: cysW [H]
Synonym: Atu0822
Alternate gene names: 15888163
Gene position: 820238-821110 (Clockwise)
Preceding gene: 159184479
Following gene: 159184480
Centisome position: 28.87
GC content: 60.94
Gene sequence:
>873_bases ATGTCTGAGACCGCTTCCCGCACCTCGCCCCGGCCATTCCGCGATCCCGCAAGCGAAAGCCTTCCCGCGCGGCTGGCGCT GATCGCCGTTGCCTTCCTGTTCCTCGCGGCCTTCCTGGTGCTGCCGCTTGTCTCGGTCTTCTTCGAAGCCTTCCGCAAGG GCGCGGATTCCTTCTGGGATGCCATCGTCGAACCAGATGCGCTGTCGGCCATCCGCCTGACGCTGCTCGTCGCCGCCATT TCGGTGCCGCTCAACGTCGTTTTCGGGGTTGCCGCCGCCTGGGCGATCGCCAAATTCGAATTCAAGGGCAAGGCGTTCCT GATCACCCTGATCGACCTGCCGTTCTCGATCTCGCCGGTCATATCGGGCCTCGTCTATGTCATCCTGTTTTCCGCTCACA GCGTGCTCGGACCATGGTTGAAGAGTTACGGCATCGAAATCCTCTTTGCGGTCCCGGGCATCGTGCTGGCTACCATCTTC GTCACCTTTCCCTTCGTCGCGCGCGAACTGATCCCGCTGATGCAGGATCAGGGCAATGGCGACGAGGAGGCGGCGATTTC GCTTGGCGCATCCGGCTGGCAGACCTTCTGGTATGTGACGCTGCCCAATATCAAATGGGGCTTGCTTTACGGTGTGCTGC TCTGCAACGCCCGCGCCATGGGCGAGTTCGGCGCCGTGTCCGTCGTATCAGGCCACATCCGCGGCGAGACCAACACCATG CCGCTGCATGTCGAGATACTCTATAATGAGTACAATATCGGCGCATCTTTCGCCGTAGCGACACTGCTTGCAGGCCTCGC GCTGGTGACGCTCGTTCTCAAAACCATTCTCGAAATACGCTTTGGCGCGGGCAACGCAGCCGGCAAGCATTGA
Upstream 100 bases:
>100_bases GCGGCAGCCACCGGCATCGCCACCATCATGCTGATCATCTCGTTTGCCATGCTGTTCCTCATCAATCTCATTCAGGCCTG GAGCCGCAAGAGGTACGGTT
Downstream 100 bases:
>100_bases AAGGCATCTTCATGGAAGTGAAAGTTTCCGGCATCACCAAGCAGTTCGATCGGTTTCCGGCGCTGAACGACGTGTCGCTC GATATACGCTCGGGCGAGCT
Product: ABC transporter, membrane spanning protein
Products: ADP; phosphate; S2O32- [Cytoplasm]; SO42- [Cytoplasm] [C]
Alternate protein names: NA
Number of amino acids: Translated: 290; Mature: 289
Protein sequence:
>290_residues MSETASRTSPRPFRDPASESLPARLALIAVAFLFLAAFLVLPLVSVFFEAFRKGADSFWDAIVEPDALSAIRLTLLVAAI SVPLNVVFGVAAAWAIAKFEFKGKAFLITLIDLPFSISPVISGLVYVILFSAHSVLGPWLKSYGIEILFAVPGIVLATIF VTFPFVARELIPLMQDQGNGDEEAAISLGASGWQTFWYVTLPNIKWGLLYGVLLCNARAMGEFGAVSVVSGHIRGETNTM PLHVEILYNEYNIGASFAVATLLAGLALVTLVLKTILEIRFGAGNAAGKH
Sequences:
>Translated_290_residues MSETASRTSPRPFRDPASESLPARLALIAVAFLFLAAFLVLPLVSVFFEAFRKGADSFWDAIVEPDALSAIRLTLLVAAI SVPLNVVFGVAAAWAIAKFEFKGKAFLITLIDLPFSISPVISGLVYVILFSAHSVLGPWLKSYGIEILFAVPGIVLATIF VTFPFVARELIPLMQDQGNGDEEAAISLGASGWQTFWYVTLPNIKWGLLYGVLLCNARAMGEFGAVSVVSGHIRGETNTM PLHVEILYNEYNIGASFAVATLLAGLALVTLVLKTILEIRFGAGNAAGKH >Mature_289_residues SETASRTSPRPFRDPASESLPARLALIAVAFLFLAAFLVLPLVSVFFEAFRKGADSFWDAIVEPDALSAIRLTLLVAAIS VPLNVVFGVAAAWAIAKFEFKGKAFLITLIDLPFSISPVISGLVYVILFSAHSVLGPWLKSYGIEILFAVPGIVLATIFV TFPFVARELIPLMQDQGNGDEEAAISLGASGWQTFWYVTLPNIKWGLLYGVLLCNARAMGEFGAVSVVSGHIRGETNTMP LHVEILYNEYNIGASFAVATLLAGLALVTLVLKTILEIRFGAGNAAGKH
Specific function: Part of the ABC transporter complex CysAWTP (TC 3.A.1.6.1) involved in sulfate/thiosulfate import. Probably responsible for the translocation of the substrate across the membrane [H]
COG id: COG4208
COG function: function code P; ABC-type sulfate transport system, permease component
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 ABC transmembrane type-1 domain [H]
Homologues:
Organism=Escherichia coli, GI87082099, Length=255, Percent_Identity=51.7647058823529, Blast_Score=274, Evalue=5e-75, Organism=Escherichia coli, GI1788764, Length=226, Percent_Identity=34.9557522123894, Blast_Score=146, Evalue=1e-36, Organism=Escherichia coli, GI1786980, Length=174, Percent_Identity=33.3333333333333, Blast_Score=81, Evalue=8e-17,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000515 - InterPro: IPR011866 - InterPro: IPR005667 [H]
Pfam domain/function: PF00528 BPD_transp_1 [H]
EC number: NA
Molecular weight: Translated: 31146; Mature: 31015
Theoretical pI: Translated: 6.11; Mature: 6.11
Prosite motif: PS50928 ABC_TM1
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.3 %Cys (Translated Protein) 1.4 %Met (Translated Protein) 1.7 %Cys+Met (Translated Protein) 0.3 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETASRTSPRPFRDPASESLPARLALIAVAFLFLAAFLVLPLVSVFFEAFRKGADSFWD CCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH AIVEPDALSAIRLTLLVAAISVPLNVVFGVAAAWAIAKFEFKGKAFLITLIDLPFSISPV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCHHHH ISGLVYVILFSAHSVLGPWLKSYGIEILFAVPGIVLATIFVTFPFVARELIPLMQDQGNG HHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DEEAAISLGASGWQTFWYVTLPNIKWGLLYGVLLCNARAMGEFGAVSVVSGHIRGETNTM CCHHHEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCHHCCCCCCHHHEEEEECCCCCCC PLHVEILYNEYNIGASFAVATLLAGLALVTLVLKTILEIRFGAGNAAGKH EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC >Mature Secondary Structure SETASRTSPRPFRDPASESLPARLALIAVAFLFLAAFLVLPLVSVFFEAFRKGADSFWD CCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHH AIVEPDALSAIRLTLLVAAISVPLNVVFGVAAAWAIAKFEFKGKAFLITLIDLPFSISPV HHCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCEEEEEEECCCCCHHHH ISGLVYVILFSAHSVLGPWLKSYGIEILFAVPGIVLATIFVTFPFVARELIPLMQDQGNG HHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC DEEAAISLGASGWQTFWYVTLPNIKWGLLYGVLLCNARAMGEFGAVSVVSGHIRGETNTM CCHHHEEECCCCCCEEEEEECCCCHHHHHHHHHHHCCHHCCCCCCHHHEEEEECCCCCCC PLHVEILYNEYNIGASFAVATLLAGLALVTLVLKTILEIRFGAGNAAGKH EEEEEEEEECCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: ATP; S2O32- [Periplasm]; H2O; SO42- [Periplasm]; ATP [C]
Specific reaction: ATP + S2O32- [Periplasm] + H2O = ADP + phosphate + S2O32- [Cytoplasm] SO42- [Periplasm] + H2O + ATP = SO42- [Cytoplasm] + phosphate + ADP [C]
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 1708375 [H]