Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is cysN
Identifier: 15888157
GI number: 15888157
Start: 814027
End: 815511
Strand: Reverse
Name: cysN
Synonym: Atu0816
Alternate gene names: 15888157
Gene position: 815511-814027 (Counterclockwise)
Preceding gene: 159184475
Following gene: 15888155
Centisome position: 28.7
GC content: 63.5
Gene sequence:
>1485_bases ATGAGCGCTGCAGCTGCCAACACCCCCTCCTCTTCCGCCACCATCCTGCCCTTTGCAGAACATTCGAAGGTGGCGCGCGA CACGCGTCCGCTGCGCCTTATCACCTGCGGCAGCGTGGATGATGGCAAATCGACCCTGATCGGCCGTCTCCTCTGGGACA CCAAGGCCGTCAAGGAAGATCAGGCCGCCACGTTGCACCGTGACAGCGGCAAGCAGAACGATCTCGGCCTGCCCGATTTC GCACTGCTGCTTGATGGTTTGCAGGCCGAGCGCGAACAGGGCATCACCATCGATGTCGCCTATCGTTATTTCGCCACCGA CCGGCGCGCCTTCATCGTCGCCGATACGCCCGGCCATGAACAATATACCCGCAACATGGCGACCGGCGCTTCCACGGCCG ATCTCGCCGTGCTGCTGGTCGATGCGCGCACCGGCATTCTGGAACAGACCCGCCGCCACGCCACCATTGCGGCGCTGATG GGCATCCGGCAATTCGTGCTGGCGGTCAACAAGATCGACCTGACGAATTACGACAAGGCCGGTTTCGAACTGATCGCCCA CGAGTTCCGCGATTTCGCCTCCGATCTCGGCATCAAGCAGATCACCGCGATTCCGATGTCGGCGCTGAAGGGTGAAAACG TCGTGCTGTCCGGCAAGGCCTCCATGCCCTGGTATGAAGGCCCGACGCTGGTGGAGACGCTGGAGCTTGCCACCGTCCGC TCCACGCAGTCCGGTGGCTTCCGCCTGCCCGTACAGCGCGTGTCGCGGCCAGGTGAAAGCTTCCGCGGTTATCAAGGCAC GGTTGCCGGCGGTTCGGTGAAGCCCGGCGACAGCGTTGTCGTCCTGCCCTCGGGCATGGTCGCCAATGTCAAGCAGATCG TCACCTTCGATCTAGTGCGCAATGCCGCTGTCGCGGGTGATGCCGTCACGCTCGTGCTCGACCGTCAAGTGGATGTCTCC CGCGGCGACATGATCGTTTCCATCGAGGCACAACCGCTCACGGGACTTGCTTTTGACGCGCAGATCGTCGCCCTGCAGCC GGGCGGCATCGAGGCCGGCAAACGCTACTGGCTGAAAAGCGCCAGCCGCCGCCAGCGCGTCAGCGTCCAGCCTGTTAGCC AGCTCAACCTTCGGGAAGGCGAATGGCAGGCGCATGAGACCTCGCTGCCGATGAACGCCATCGGCAAGGTGCGTCTCTCC TTCGACGAGACGGCGATCTTCGATCCCTATGAACAGAACCGGGCGACCGGCTCCTTCATCCTGATCGACCCTGACACCAA CAATACGGTGGCGGGCGGCATGATCTCGGCCAAGCGCAGCACAGGTGCGACGGAGGAACAGGGCGACCGCGTCATCCTCT CCCTGCCTGCCGGTCTGGCGGAAAAGCTGCTGGCCGGAGAACTGCTCGCCAAGCACCGCGACGAGATCGACATCCGCCGC ACGGATGCGGCGACAGCTTCACGGCTCATAGGCGATCTCGACTGA
Upstream 100 bases:
>100_bases CCGAACTGGAAATCGCCACCGTCTCCGAGCGGCAGGGCCGAGCGATTGACCGCGACCAATCCGGCTCCATGGAGAAAAAG AAGCGCGAGGGCTATTTCTG
Downstream 100 bases:
>100_bases AAACGCCCACATGAACGGCAAAAGGCGACCACGGTGTGGTCGCCTTTTTGTTTGGTCTGTCGTCCAGATGCGACTTAAAA CACGAACATATAAAGCAGAA
Product: sulfate adenylyltransferase subunit 1
Products: NA
Alternate protein names: ATP-sulfurylase large subunit; Sulfate adenylate transferase; SAT
Number of amino acids: Translated: 494; Mature: 493
Protein sequence:
>494_residues MSAAAANTPSSSATILPFAEHSKVARDTRPLRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAATLHRDSGKQNDLGLPDF ALLLDGLQAEREQGITIDVAYRYFATDRRAFIVADTPGHEQYTRNMATGASTADLAVLLVDARTGILEQTRRHATIAALM GIRQFVLAVNKIDLTNYDKAGFELIAHEFRDFASDLGIKQITAIPMSALKGENVVLSGKASMPWYEGPTLVETLELATVR STQSGGFRLPVQRVSRPGESFRGYQGTVAGGSVKPGDSVVVLPSGMVANVKQIVTFDLVRNAAVAGDAVTLVLDRQVDVS RGDMIVSIEAQPLTGLAFDAQIVALQPGGIEAGKRYWLKSASRRQRVSVQPVSQLNLREGEWQAHETSLPMNAIGKVRLS FDETAIFDPYEQNRATGSFILIDPDTNNTVAGGMISAKRSTGATEEQGDRVILSLPAGLAEKLLAGELLAKHRDEIDIRR TDAATASRLIGDLD
Sequences:
>Translated_494_residues MSAAAANTPSSSATILPFAEHSKVARDTRPLRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAATLHRDSGKQNDLGLPDF ALLLDGLQAEREQGITIDVAYRYFATDRRAFIVADTPGHEQYTRNMATGASTADLAVLLVDARTGILEQTRRHATIAALM GIRQFVLAVNKIDLTNYDKAGFELIAHEFRDFASDLGIKQITAIPMSALKGENVVLSGKASMPWYEGPTLVETLELATVR STQSGGFRLPVQRVSRPGESFRGYQGTVAGGSVKPGDSVVVLPSGMVANVKQIVTFDLVRNAAVAGDAVTLVLDRQVDVS RGDMIVSIEAQPLTGLAFDAQIVALQPGGIEAGKRYWLKSASRRQRVSVQPVSQLNLREGEWQAHETSLPMNAIGKVRLS FDETAIFDPYEQNRATGSFILIDPDTNNTVAGGMISAKRSTGATEEQGDRVILSLPAGLAEKLLAGELLAKHRDEIDIRR TDAATASRLIGDLD >Mature_493_residues SAAAANTPSSSATILPFAEHSKVARDTRPLRLITCGSVDDGKSTLIGRLLWDTKAVKEDQAATLHRDSGKQNDLGLPDFA LLLDGLQAEREQGITIDVAYRYFATDRRAFIVADTPGHEQYTRNMATGASTADLAVLLVDARTGILEQTRRHATIAALMG IRQFVLAVNKIDLTNYDKAGFELIAHEFRDFASDLGIKQITAIPMSALKGENVVLSGKASMPWYEGPTLVETLELATVRS TQSGGFRLPVQRVSRPGESFRGYQGTVAGGSVKPGDSVVVLPSGMVANVKQIVTFDLVRNAAVAGDAVTLVLDRQVDVSR GDMIVSIEAQPLTGLAFDAQIVALQPGGIEAGKRYWLKSASRRQRVSVQPVSQLNLREGEWQAHETSLPMNAIGKVRLSF DETAIFDPYEQNRATGSFILIDPDTNNTVAGGMISAKRSTGATEEQGDRVILSLPAGLAEKLLAGELLAKHRDEIDIRRT DAATASRLIGDLD
Specific function: May be the GTPase, regulating ATP sulfurylase activity
COG id: COG2895
COG function: function code P; GTPases - Sulfate adenylate transferase subunit 1
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the GTP-binding elongation factor family. CysN/nodQ subfamily
Homologues:
Organism=Homo sapiens, GI4503471, Length=359, Percent_Identity=32.3119777158774, Blast_Score=156, Evalue=3e-38, Organism=Homo sapiens, GI5729864, Length=297, Percent_Identity=33.3333333333333, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI223555963, Length=297, Percent_Identity=33.3333333333333, Blast_Score=152, Evalue=9e-37, Organism=Homo sapiens, GI4503475, Length=359, Percent_Identity=30.6406685236769, Blast_Score=149, Evalue=7e-36, Organism=Homo sapiens, GI194097354, Length=331, Percent_Identity=28.3987915407855, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI194018520, Length=331, Percent_Identity=28.3987915407855, Blast_Score=134, Evalue=1e-31, Organism=Homo sapiens, GI194018522, Length=331, Percent_Identity=28.3987915407855, Blast_Score=134, Evalue=2e-31, Organism=Homo sapiens, GI46094014, Length=331, Percent_Identity=28.3987915407855, Blast_Score=132, Evalue=1e-30, Organism=Homo sapiens, GI34147630, Length=317, Percent_Identity=30.9148264984227, Blast_Score=97, Evalue=5e-20, Organism=Escherichia coli, GI1789108, Length=416, Percent_Identity=51.4423076923077, Blast_Score=393, Evalue=1e-110, Organism=Escherichia coli, GI2367247, Length=315, Percent_Identity=24.4444444444444, Blast_Score=71, Evalue=2e-13, Organism=Escherichia coli, GI1789737, Length=153, Percent_Identity=30.718954248366, Blast_Score=69, Evalue=6e-13, Organism=Escherichia coli, GI1790412, Length=153, Percent_Identity=30.718954248366, Blast_Score=69, Evalue=6e-13, Organism=Caenorhabditis elegans, GI17552884, Length=352, Percent_Identity=32.1022727272727, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI17569207, Length=352, Percent_Identity=32.1022727272727, Blast_Score=152, Evalue=3e-37, Organism=Caenorhabditis elegans, GI32566629, Length=425, Percent_Identity=28.7058823529412, Blast_Score=150, Evalue=2e-36, Organism=Caenorhabditis elegans, GI115532067, Length=292, Percent_Identity=30.8219178082192, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI115532065, Length=292, Percent_Identity=30.8219178082192, Blast_Score=147, Evalue=1e-35, Organism=Caenorhabditis elegans, GI32566303, Length=345, Percent_Identity=29.5652173913043, Blast_Score=121, Evalue=1e-27, Organism=Caenorhabditis elegans, GI32566301, Length=143, Percent_Identity=37.0629370629371, Blast_Score=97, Evalue=2e-20, Organism=Caenorhabditis elegans, GI25141371, Length=259, Percent_Identity=27.7992277992278, Blast_Score=84, Evalue=1e-16, Organism=Caenorhabditis elegans, GI17556456, Length=177, Percent_Identity=31.638418079096, Blast_Score=73, Evalue=3e-13, Organism=Saccharomyces cerevisiae, GI6325337, Length=363, Percent_Identity=31.9559228650138, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6319594, Length=363, Percent_Identity=31.9559228650138, Blast_Score=161, Evalue=2e-40, Organism=Saccharomyces cerevisiae, GI6322937, Length=330, Percent_Identity=30.9090909090909, Blast_Score=156, Evalue=6e-39, Organism=Saccharomyces cerevisiae, GI6320377, Length=338, Percent_Identity=29.2899408284024, Blast_Score=117, Evalue=3e-27, Organism=Saccharomyces cerevisiae, GI6324761, Length=334, Percent_Identity=28.1437125748503, Blast_Score=89, Evalue=1e-18, Organism=Drosophila melanogaster, GI24652838, Length=353, Percent_Identity=32.8611898016997, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI17137572, Length=353, Percent_Identity=32.8611898016997, Blast_Score=159, Evalue=5e-39, Organism=Drosophila melanogaster, GI45553807, Length=353, Percent_Identity=32.5779036827195, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI45553816, Length=353, Percent_Identity=32.5779036827195, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI24651721, Length=353, Percent_Identity=32.5779036827195, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI17864154, Length=353, Percent_Identity=32.5779036827195, Blast_Score=152, Evalue=4e-37, Organism=Drosophila melanogaster, GI17137380, Length=356, Percent_Identity=29.7752808988764, Blast_Score=144, Evalue=2e-34, Organism=Drosophila melanogaster, GI45550900, Length=309, Percent_Identity=31.3915857605178, Blast_Score=135, Evalue=6e-32, Organism=Drosophila melanogaster, GI281363316, Length=315, Percent_Identity=29.2063492063492, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI17864358, Length=315, Percent_Identity=29.2063492063492, Blast_Score=99, Evalue=8e-21, Organism=Drosophila melanogaster, GI19921738, Length=250, Percent_Identity=29.6, Blast_Score=90, Evalue=5e-18,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): CYSN_AGRT5 (Q8UH69)
Other databases:
- EMBL: AE007869 - PIR: AH2676 - PIR: F97458 - RefSeq: NP_353838.1 - ProteinModelPortal: Q8UH69 - STRING: Q8UH69 - GeneID: 1132854 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0816 - eggNOG: COG2895 - HOGENOM: HBG307581 - OMA: MELNDIA - PhylomeDB: Q8UH69 - ProtClustDB: PRK05124 - BioCyc: ATUM176299-1:ATU0816-MONOMER - HAMAP: MF_00062 - InterPro: IPR000795 - InterPro: IPR011779 - InterPro: IPR009001 - InterPro: IPR009000 - PRINTS: PR00315 - TIGRFAMs: TIGR02034
Pfam domain/function: PF00009 GTP_EFTU; SSF50465 Elong_init_C; SSF50447 Translat_factor
EC number: =2.7.7.4
Molecular weight: Translated: 53222; Mature: 53091
Theoretical pI: Translated: 5.98; Mature: 5.98
Prosite motif: PS00301 EFACTOR_GTP
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.2 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 2.0 %Cys+Met (Translated Protein) 0.2 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAAAANTPSSSATILPFAEHSKVARDTRPLRLITCGSVDDGKSTLIGRLLWDTKAVKED CCCCCCCCCCCCEEEEEEHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC QAATLHRDSGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFATDRRAFIVADTPGHE HHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCH QYTRNMATGASTADLAVLLVDARTGILEQTRRHATIAALMGIRQFVLAVNKIDLTNYDKA HHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHH GFELIAHEFRDFASDLGIKQITAIPMSALKGENVVLSGKASMPWYEGPTLVETLELATVR HHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHEEE STQSGGFRLPVQRVSRPGESFRGYQGTVAGGSVKPGDSVVVLPSGMVANVKQIVTFDLVR CCCCCCEECCHHHHCCCCHHHCCCCCEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH NAAVAGDAVTLVLDRQVDVSRGDMIVSIEAQPLTGLAFDAQIVALQPGGIEAGKRYWLKS HHHCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEECEEEEEECCCCCCHHHHHHHHC ASRRQRVSVQPVSQLNLREGEWQAHETSLPMNAIGKVRLSFDETAIFDPYEQNRATGSFI CCHHCCEECCCHHHCCCCCCCCCCCCCCCCHHHCEEEEEEECCCEECCCHHHCCCCCEEE LIDPDTNNTVAGGMISAKRSTGATEEQGDRVILSLPAGLAEKLLAGELLAKHRDEIDIRR EECCCCCCCEECCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE TDAATASRLIGDLD CCHHHHHHHHCCCC >Mature Secondary Structure SAAAANTPSSSATILPFAEHSKVARDTRPLRLITCGSVDDGKSTLIGRLLWDTKAVKED CCCCCCCCCCCEEEEEEHHHHHHHHCCCCEEEEEECCCCCCHHHHHHHHHHHHHHHCCC QAATLHRDSGKQNDLGLPDFALLLDGLQAEREQGITIDVAYRYFATDRRAFIVADTPGHE HHHHEECCCCCCCCCCCCHHHHHHHHHHHHHHCCCEEEEEEEEEECCCEEEEEEECCCCH QYTRNMATGASTADLAVLLVDARTGILEQTRRHATIAALMGIRQFVLAVNKIDLTNYDKA HHHHHHHCCCCCCCEEEEEEECCCCHHHHHHHHHHHHHHHHHHHHHHHHHEEECCCCCHH GFELIAHEFRDFASDLGIKQITAIPMSALKGENVVLSGKASMPWYEGPTLVETLELATVR HHHHHHHHHHHHHHHCCCHHHHHCCHHHCCCCCEEEECCCCCCCCCCCHHHHHHHHHEEE STQSGGFRLPVQRVSRPGESFRGYQGTVAGGSVKPGDSVVVLPSGMVANVKQIVTFDLVR CCCCCCEECCHHHHCCCCHHHCCCCCEECCCCCCCCCCEEEECCCHHHHHHHHHHHHHHH NAAVAGDAVTLVLDRQVDVSRGDMIVSIEAQPLTGLAFDAQIVALQPGGIEAGKRYWLKS HHHCCCCEEEEEEECCCCCCCCCEEEEEECCCCCCEEECEEEEEECCCCCCHHHHHHHHC ASRRQRVSVQPVSQLNLREGEWQAHETSLPMNAIGKVRLSFDETAIFDPYEQNRATGSFI CCHHCCEECCCHHHCCCCCCCCCCCCCCCCHHHCEEEEEEECCCEECCCHHHCCCCCEEE LIDPDTNNTVAGGMISAKRSTGATEEQGDRVILSLPAGLAEKLLAGELLAKHRDEIDIRR EECCCCCCCEECCEEEECCCCCCCCCCCCEEEEECCCHHHHHHHHHHHHHHCCCCCEEEE TDAATASRLIGDLD CCHHHHHHHHCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194