Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15888152
Identifier: 15888152
GI number: 15888152
Start: 809575
End: 809886
Strand: Reverse
Name: 15888152
Synonym: Atu0809
Alternate gene names: NA
Gene position: 809886-809575 (Counterclockwise)
Preceding gene: 15888153
Following gene: 159184473
Centisome position: 28.5
GC content: 56.73
Gene sequence:
>312_bases GTGACCACTAAGCTTGTCTGGACGCCCCGCGCACGCAGCGACGTGAAGAAAATCTATGTCGATATCGGCAAGTCACAGCC TTTGGCTGCGGAGCGGTATTTTGCCCGTTTCCGCGCCAAAGCGGAGAGCCTGATCGACCATCCCCATCTTGGCGAACGCC ATCCGGAAATTTTTCCGTCTGCCCGCATGCTCGTCGAAGCACCTTACGTCATTCTCTACGAAACCGTGCCGGATACGGAT GACGACGAAATACGTTGCGTGGAAATCGTTCGTGTGAACGACGGTCGCCGGGACCTGCGGACACTGTTCTGA
Upstream 100 bases:
>100_bases GCATTATGGAGTGAGGGCAAAGCCAGTGGCAATTCAACCGAAGTGGATTTTGACGAAACGCTCAATGAAGCGCGGGCGGA ACTTGCTTCGTTGAAGAATC
Downstream 100 bases:
>100_bases CTTTGGAAGTGATGGCTGGGGCGCCAGGATTCGAACCTGGGAATGCCGGTACCAAAAACCGGTGCCTTACCGCTTGGCGA CGCCCCAACAGGGCAGCGAG
Product: hypothetical protein
Products: NA
Alternate protein names: Plasmid Stabilization System Protein
Number of amino acids: Translated: 103; Mature: 102
Protein sequence:
>103_residues MTTKLVWTPRARSDVKKIYVDIGKSQPLAAERYFARFRAKAESLIDHPHLGERHPEIFPSARMLVEAPYVILYETVPDTD DDEIRCVEIVRVNDGRRDLRTLF
Sequences:
>Translated_103_residues MTTKLVWTPRARSDVKKIYVDIGKSQPLAAERYFARFRAKAESLIDHPHLGERHPEIFPSARMLVEAPYVILYETVPDTD DDEIRCVEIVRVNDGRRDLRTLF >Mature_102_residues TTKLVWTPRARSDVKKIYVDIGKSQPLAAERYFARFRAKAESLIDHPHLGERHPEIFPSARMLVEAPYVILYETVPDTDD DEIRCVEIVRVNDGRRDLRTLF
Specific function: Unknown
COG id: COG3668
COG function: function code R; Plasmid stabilization system protein
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 12013; Mature: 11882
Theoretical pI: Translated: 7.60; Mature: 7.60
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 1.9 %Met (Translated Protein) 2.9 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 2.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTTKLVWTPRARSDVKKIYVDIGKSQPLAAERYFARFRAKAESLIDHPHLGERHPEIFPS CCCEEEECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ARMLVEAPYVILYETVPDTDDDEIRCVEIVRVNDGRRDLRTLF CHHEEECCEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHCC >Mature Secondary Structure TTKLVWTPRARSDVKKIYVDIGKSQPLAAERYFARFRAKAESLIDHPHLGERHPEIFPS CCEEEECCCCHHHHHHHHEECCCCCCHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCC ARMLVEAPYVILYETVPDTDDDEIRCVEIVRVNDGRRDLRTLF CHHEEECCEEEEEECCCCCCCCCEEEEEEEEECCCHHHHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA