Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is yihX [C]

Identifier: 15888140

GI number: 15888140

Start: 793141

End: 793752

Strand: Reverse

Name: yihX [C]

Synonym: Atu0797

Alternate gene names: 15888140

Gene position: 793752-793141 (Counterclockwise)

Preceding gene: 15888141

Following gene: 159184468

Centisome position: 27.93

GC content: 58.5

Gene sequence:

>612_bases
ATGACCAAGATTGACCATATCGTATTCGACATCGGCAAGGTGCTGATCCATTACGATCCGCATATTCCCTATAGCCGCCT
CATTCCCGATGCCGATGAGCGCCAATGGTTCTTCGAGAATGTCTGCACCCATGACTGGAACCTCGAACAGGATCGCGGCC
GCCGCTGGGAAGATGCCGAGGCGCTGCTGCTTGAGCGGTTTCCCGAACGGGAAGAGCACATCCGCGCCTTCCGCAAGTTC
TGGCACGAGATGGTCTCGCACTCCTATGATGACAGCGTCGCGATCATGGTTGCCCTGATCGACAGCGGCCATGATGTGAC
GATGCTGACCAACTTCGCCTCCGACACTTTTCGCGAAGCGCAGAAGATGTTCCCCTTCCTCACCCTGCCGCGCGGCGTAA
CGGTCTCCGGCGACGTGAAGCTTTTGAAGCCGGATGTGGCGATCTACCATCTGCACGCCAAAGAATTCGGCCTCAATCCG
GCCACCAGCCTCTTCATCGACGATACGCTCGCCAATGTCGAAGGCGCCAAGGCCGCCGGCTGGCAGGCCGTGCATTTTAC
CGGCGCGGAAAAGCTGAAGCAGGATTTGCGGGCCTATGGGGTGGAGGTGTAA

Upstream 100 bases:

>100_bases
AGCCGGTTACAAATCTTGACGCGCAGGCGCTGCCAACGGTGATGAAAAAAGTCATTGCAGAGGCTATTCCATCCGCATTC
GATAAAAGCAGGAAGTTTCG

Downstream 100 bases:

>100_bases
AGACATTCGTAGTCTCTACACCCATCGGCTGTAACTTGAGGGCTGGCCATGTCTGCGATATCGCGACATATTATTGATCG
AGGTGATGGCGCGGCCGTTG

Product: hydrolase

Products: NA

Alternate protein names: HAD-Superfamily Hydrolase; Hydrolase; HAD Superfamily Hydrolase; Haloacid Dehalogenase-Like Hydrolase; Alpha Beta Hydrolase; HAD Hydrolase Family IA; 2-Haloacid Dehalogenase; HAD Family Phosphatase; Hydrolase Haloacid Dehalogenase-Like Family Protein; Haloacid Dehalogenase Superfamily Protein; Hydrolase Protein; Haloacid Dehalogenase-Like Family Hydrolase; HAD-Superfamily Hydrolase Subfamily IA; Hydrolase Haloacid Dehalogenase-Like Family; Hydrolase Protein Haloacid Dehalogenase-Like Family; Haloacid Dehalogenase-Like Hydrolase Protein; HAD Hydrolase Superfamily Protein

Number of amino acids: Translated: 203; Mature: 202

Protein sequence:

>203_residues
MTKIDHIVFDIGKVLIHYDPHIPYSRLIPDADERQWFFENVCTHDWNLEQDRGRRWEDAEALLLERFPEREEHIRAFRKF
WHEMVSHSYDDSVAIMVALIDSGHDVTMLTNFASDTFREAQKMFPFLTLPRGVTVSGDVKLLKPDVAIYHLHAKEFGLNP
ATSLFIDDTLANVEGAKAAGWQAVHFTGAEKLKQDLRAYGVEV

Sequences:

>Translated_203_residues
MTKIDHIVFDIGKVLIHYDPHIPYSRLIPDADERQWFFENVCTHDWNLEQDRGRRWEDAEALLLERFPEREEHIRAFRKF
WHEMVSHSYDDSVAIMVALIDSGHDVTMLTNFASDTFREAQKMFPFLTLPRGVTVSGDVKLLKPDVAIYHLHAKEFGLNP
ATSLFIDDTLANVEGAKAAGWQAVHFTGAEKLKQDLRAYGVEV
>Mature_202_residues
TKIDHIVFDIGKVLIHYDPHIPYSRLIPDADERQWFFENVCTHDWNLEQDRGRRWEDAEALLLERFPEREEHIRAFRKFW
HEMVSHSYDDSVAIMVALIDSGHDVTMLTNFASDTFREAQKMFPFLTLPRGVTVSGDVKLLKPDVAIYHLHAKEFGLNPA
TSLFIDDTLANVEGAKAAGWQAVHFTGAEKLKQDLRAYGVEV

Specific function: Unknown

COG id: COG1011

COG function: function code R; Predicted hydrolase (HAD superfamily)

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 23425; Mature: 23294

Theoretical pI: Translated: 5.51; Mature: 5.51

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
2.5 %Met     (Translated Protein)
3.0 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTKIDHIVFDIGKVLIHYDPHIPYSRLIPDADERQWFFENVCTHDWNLEQDRGRRWEDAE
CCCHHHHHHHHHHHEEEECCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCHHH
ALLLERFPEREEHIRAFRKFWHEMVSHSYDDSVAIMVALIDSGHDVTMLTNFASDTFREA
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHH
QKMFPFLTLPRGVTVSGDVKLLKPDVAIYHLHAKEFGLNPATSLFIDDTLANVEGAKAAG
HHHCCEEECCCCEEECCCEEEECCCEEEEEEEHHHHCCCCHHHEEEHHHHHCCCCCCCCC
WQAVHFTGAEKLKQDLRAYGVEV
EEEEEECCHHHHHHHHHHHCCCC
>Mature Secondary Structure 
TKIDHIVFDIGKVLIHYDPHIPYSRLIPDADERQWFFENVCTHDWNLEQDRGRRWEDAE
CCHHHHHHHHHHHEEEECCCCCHHHCCCCCCHHHHHHHHHCCCCCCCCHHHCCCCCHHH
ALLLERFPEREEHIRAFRKFWHEMVSHSYDDSVAIMVALIDSGHDVTMLTNFASDTFREA
HHHHHHCCCHHHHHHHHHHHHHHHHHCCCCCCEEEEEEEECCCCCEEEEEHHHHHHHHHH
QKMFPFLTLPRGVTVSGDVKLLKPDVAIYHLHAKEFGLNPATSLFIDDTLANVEGAKAAG
HHHCCEEECCCCEEECCCEEEECCCEEEEEEEHHHHCCCCHHHEEEHHHHHCCCCCCCCC
WQAVHFTGAEKLKQDLRAYGVEV
EEEEEECCHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA