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The map label for this gene is glcD [C]

Identifier: 15888067

GI number: 15888067

Start: 722705

End: 724141

Strand: Reverse

Name: glcD [C]

Synonym: Atu0723

Alternate gene names: 15888067

Gene position: 724141-722705 (Counterclockwise)

Preceding gene: 159184438

Following gene: 159184436

Centisome position: 25.48

GC content: 62.35

Gene sequence:

>1437_bases
ATGACGCCCATGACCGCCATCCCCTCCTCCGATATCCTTGACCGCTTCACCGCCATCGTTGGCGAAAAAAATGCGGTGCG
CGACCTGGCGGAAATGGCACCGCGCCTGGTGGAAAATCGCGGACTTTATCGCGGCGCTTCCCCCCTGCTCCTCAAGCCCG
GTTCCGTCGAGGAGGTTGCCGCCATCCTGAAGCTCGCCAGCGAGACCGGCACGCCCATCGTGCCGCAAACCGGCAATACC
GGCCTTGTGGGCGGCCAGACGCCGCGCGCTGACGGCACCGATATCATCCTATCGCTGGAGCGCATGAACCGCATCCGCGA
CATCGATCCCGTTGCCAATATCATCGTCGCCGATGCCGGCTGCATTCTTGACGACATTCACAAGGCCGCCAGCTCCGTGG
AGCGCATGTTCCCGCTATCGCTCGGTTCTCAAGGCTCCTGCCGCATCGGTGGCAATCTCGCCACCAATGCAGGCGGAACG
GCGGTGCTTGCCTATGGCAATATGCGCCAGCTGTGCCTCGGGCTCGAAGTGGTCCTGCCAACCGGCGAAATCTGGAACGG
GCTGCGCCGGCTGAAAAAGGACAATACGGGTTACGATCTGCGCGATCTCTTCATCGGCTCCGAGGGCACGCTCGGTGTCA
TCACCGGCGCGGTGCTGAAGCTTTTCCCCAAGCCGCTCGGCCATCAGGTCGCTTTTGCCGGTCTTGCCTCCACCGAGGAT
GCCCTGAAACTGTTCGAAATGGCCTCCAACCTCTGCGGCACGGCGCTGACCGGCTTTGAACTCATGCCACGAATCGGCGT
CGAGTTCACCGCCAGGCACATTCCCGGCGTGCGCGACCCTCTGGGGCAGCCGCATGACTGGTACGCGCTCATCGATATCT
CCACCTCCGATTCGGCCGAGACGGCGGACACGATGATGCAATCGCTGCTGGAGCGTGGTTTTGAGGCCGGGCTGGTCGAG
GATGCGGTGATCGCCTCATCGGAAGCGCAGCGTCAGGCGCTGTGGCACATGCGTGAAAGCATGTCGGACGCGCAGAAGCC
GGAGGGCGGATCGATCAAGCATGACGTTTCCGTTCCGGTGTCGAAAATACCGGAATTCATGACTACTGCGGAAAAGGCCG
TGCTCGCCGCCATTCCCGGCGCCCGCATCTGCGCCTTCGGCCATCTCGGCGACGGCAACATCCACTACAATATCTCCCAG
CCAGTCGGTGCCGACAAGGCCGAATTCCTCGGCCGCTGGCGAGACATGAACGAGATCGTGCACGGTATCGTGCTGTCGCT
CGGCGGCTCGATTTCGGCCGAACATGGTATCGGCCAGCTGAAGCGCGACGAACTGGCCGCCATCCGGCCCGGCATTGAAA
TGGAGTTGATGCATCGCATCAAGCACGCCTTCGACCCTGCGGGTATCATGAACCCCGGCAAGGTTTTGGTGGGGTAA

Upstream 100 bases:

>100_bases
GAGAGGCGATCAACGACCGCCTTTCCCGCGCCGCCGCGCCGCGAGGCTGACGGCACTCAACCCTTTCGCCCATGTTTCAA
AAGACAGCGAGACGCCGCCC

Downstream 100 bases:

>100_bases
GATTGCCGGCCTCAGGCCGGCGTTCGCAAAGCCCAGGCCGGCACCATTTCCGCATTCAAGCGGCGCGGCTTTTGCCCGCC
AACCAGCTCCTTAAGGCTCA

Product: FAD dependent oxidoreductase

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 478; Mature: 477

Protein sequence:

>478_residues
MTPMTAIPSSDILDRFTAIVGEKNAVRDLAEMAPRLVENRGLYRGASPLLLKPGSVEEVAAILKLASETGTPIVPQTGNT
GLVGGQTPRADGTDIILSLERMNRIRDIDPVANIIVADAGCILDDIHKAASSVERMFPLSLGSQGSCRIGGNLATNAGGT
AVLAYGNMRQLCLGLEVVLPTGEIWNGLRRLKKDNTGYDLRDLFIGSEGTLGVITGAVLKLFPKPLGHQVAFAGLASTED
ALKLFEMASNLCGTALTGFELMPRIGVEFTARHIPGVRDPLGQPHDWYALIDISTSDSAETADTMMQSLLERGFEAGLVE
DAVIASSEAQRQALWHMRESMSDAQKPEGGSIKHDVSVPVSKIPEFMTTAEKAVLAAIPGARICAFGHLGDGNIHYNISQ
PVGADKAEFLGRWRDMNEIVHGIVLSLGGSISAEHGIGQLKRDELAAIRPGIEMELMHRIKHAFDPAGIMNPGKVLVG

Sequences:

>Translated_478_residues
MTPMTAIPSSDILDRFTAIVGEKNAVRDLAEMAPRLVENRGLYRGASPLLLKPGSVEEVAAILKLASETGTPIVPQTGNT
GLVGGQTPRADGTDIILSLERMNRIRDIDPVANIIVADAGCILDDIHKAASSVERMFPLSLGSQGSCRIGGNLATNAGGT
AVLAYGNMRQLCLGLEVVLPTGEIWNGLRRLKKDNTGYDLRDLFIGSEGTLGVITGAVLKLFPKPLGHQVAFAGLASTED
ALKLFEMASNLCGTALTGFELMPRIGVEFTARHIPGVRDPLGQPHDWYALIDISTSDSAETADTMMQSLLERGFEAGLVE
DAVIASSEAQRQALWHMRESMSDAQKPEGGSIKHDVSVPVSKIPEFMTTAEKAVLAAIPGARICAFGHLGDGNIHYNISQ
PVGADKAEFLGRWRDMNEIVHGIVLSLGGSISAEHGIGQLKRDELAAIRPGIEMELMHRIKHAFDPAGIMNPGKVLVG
>Mature_477_residues
TPMTAIPSSDILDRFTAIVGEKNAVRDLAEMAPRLVENRGLYRGASPLLLKPGSVEEVAAILKLASETGTPIVPQTGNTG
LVGGQTPRADGTDIILSLERMNRIRDIDPVANIIVADAGCILDDIHKAASSVERMFPLSLGSQGSCRIGGNLATNAGGTA
VLAYGNMRQLCLGLEVVLPTGEIWNGLRRLKKDNTGYDLRDLFIGSEGTLGVITGAVLKLFPKPLGHQVAFAGLASTEDA
LKLFEMASNLCGTALTGFELMPRIGVEFTARHIPGVRDPLGQPHDWYALIDISTSDSAETADTMMQSLLERGFEAGLVED
AVIASSEAQRQALWHMRESMSDAQKPEGGSIKHDVSVPVSKIPEFMTTAEKAVLAAIPGARICAFGHLGDGNIHYNISQP
VGADKAEFLGRWRDMNEIVHGIVLSLGGSISAEHGIGQLKRDELAAIRPGIEMELMHRIKHAFDPAGIMNPGKVLVG

Specific function: Unknown

COG id: COG0277

COG function: function code C; FAD/FMN-containing dehydrogenases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 FAD-binding PCMH-type domain [H]

Homologues:

Organism=Homo sapiens, GI119964728, Length=475, Percent_Identity=38.3157894736842, Blast_Score=294, Evalue=1e-79,
Organism=Homo sapiens, GI37595756, Length=478, Percent_Identity=29.2887029288703, Blast_Score=159, Evalue=7e-39,
Organism=Homo sapiens, GI37595754, Length=501, Percent_Identity=27.9441117764471, Blast_Score=148, Evalue=1e-35,
Organism=Homo sapiens, GI4501993, Length=247, Percent_Identity=28.7449392712551, Blast_Score=73, Evalue=5e-13,
Organism=Escherichia coli, GI1789351, Length=458, Percent_Identity=31.4410480349345, Blast_Score=160, Evalue=1e-40,
Organism=Escherichia coli, GI48994907, Length=219, Percent_Identity=26.4840182648402, Blast_Score=65, Evalue=1e-11,
Organism=Caenorhabditis elegans, GI17534361, Length=477, Percent_Identity=34.3815513626834, Blast_Score=256, Evalue=2e-68,
Organism=Caenorhabditis elegans, GI71992373, Length=489, Percent_Identity=29.2433537832311, Blast_Score=147, Evalue=2e-35,
Organism=Caenorhabditis elegans, GI71992381, Length=489, Percent_Identity=28.2208588957055, Blast_Score=136, Evalue=2e-32,
Organism=Caenorhabditis elegans, GI71992392, Length=352, Percent_Identity=29.5454545454545, Blast_Score=122, Evalue=6e-28,
Organism=Saccharomyces cerevisiae, GI6320023, Length=480, Percent_Identity=37.5, Blast_Score=320, Evalue=4e-88,
Organism=Saccharomyces cerevisiae, GI6320764, Length=485, Percent_Identity=36.2886597938144, Blast_Score=303, Evalue=4e-83,
Organism=Saccharomyces cerevisiae, GI6320027, Length=453, Percent_Identity=30.4635761589404, Blast_Score=154, Evalue=3e-38,
Organism=Drosophila melanogaster, GI18921117, Length=437, Percent_Identity=38.6727688787185, Blast_Score=282, Evalue=3e-76,
Organism=Drosophila melanogaster, GI24639277, Length=437, Percent_Identity=38.6727688787185, Blast_Score=282, Evalue=3e-76,
Organism=Drosophila melanogaster, GI24639275, Length=437, Percent_Identity=38.6727688787185, Blast_Score=282, Evalue=3e-76,
Organism=Drosophila melanogaster, GI24653753, Length=216, Percent_Identity=26.8518518518519, Blast_Score=69, Evalue=8e-12,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR016166
- InterPro:   IPR016167
- InterPro:   IPR016164
- InterPro:   IPR016168
- InterPro:   IPR004113
- InterPro:   IPR006094
- InterPro:   IPR016171 [H]

Pfam domain/function: PF02913 FAD-oxidase_C; PF01565 FAD_binding_4 [H]

EC number: NA

Molecular weight: Translated: 50946; Mature: 50815

Theoretical pI: Translated: 5.46; Mature: 5.46

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.6 %Met     (Translated Protein)
4.6 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTPMTAIPSSDILDRFTAIVGEKNAVRDLAEMAPRLVENRGLYRGASPLLLKPGSVEEVA
CCCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHH
AILKLASETGTPIVPQTGNTGLVGGQTPRADGTDIILSLERMNRIRDIDPVANIIVADAG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHCCH
CILDDIHKAASSVERMFPLSLGSQGSCRIGGNLATNAGGTAVLAYGNMRQLCLGLEVVLP
HHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEECCCCCCEEEEECCHHHHHHCHHEEEC
TGEIWNGLRRLKKDNTGYDLRDLFIGSEGTLGVITGAVLKLFPKPLGHQVAFAGLASTED
CHHHHHHHHHHHCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCCCCCEEHHCCCCCHH
ALKLFEMASNLCGTALTGFELMPRIGVEFTARHIPGVRDPLGQPHDWYALIDISTSDSAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCCCCCCCEEEEEEECCCCCHH
TADTMMQSLLERGFEAGLVEDAVIASSEAQRQALWHMRESMSDAQKPEGGSIKHDVSVPV
HHHHHHHHHHHCCHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
SKIPEFMTTAEKAVLAAIPGARICAFGHLGDGNIHYNISQPVGADKAEFLGRWRDMNEIV
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
HGIVLSLGGSISAEHGIGQLKRDELAAIRPGIEMELMHRIKHAFDPAGIMNPGKVLVG
HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEECC
>Mature Secondary Structure 
TPMTAIPSSDILDRFTAIVGEKNAVRDLAEMAPRLVENRGLYRGASPLLLKPGSVEEVA
CCCCCCCCHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCEECCCCHHHHH
AILKLASETGTPIVPQTGNTGLVGGQTPRADGTDIILSLERMNRIRDIDPVANIIVADAG
HHHHHHHCCCCCCCCCCCCCCCCCCCCCCCCCCCEEEEHHHHHHHHCCCHHHHHHHHCCH
CILDDIHKAASSVERMFPLSLGSQGSCRIGGNLATNAGGTAVLAYGNMRQLCLGLEVVLP
HHHHHHHHHHHHHHHHCCCCCCCCCCEEECCEEECCCCCCEEEEECCHHHHHHCHHEEEC
TGEIWNGLRRLKKDNTGYDLRDLFIGSEGTLGVITGAVLKLFPKPLGHQVAFAGLASTED
CHHHHHHHHHHHCCCCCCCHHHEEECCCCCHHHHHHHHHHHCCCCCCCCEEHHCCCCCHH
ALKLFEMASNLCGTALTGFELMPRIGVEFTARHIPGVRDPLGQPHDWYALIDISTSDSAE
HHHHHHHHHHHHHHHHHHHHHHHHCCCEEHHHHCCCCCCCCCCCCCEEEEEEECCCCCHH
TADTMMQSLLERGFEAGLVEDAVIASSEAQRQALWHMRESMSDAQKPEGGSIKHDVSVPV
HHHHHHHHHHHCCHHCCCHHHHHHHCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCH
SKIPEFMTTAEKAVLAAIPGARICAFGHLGDGNIHYNISQPVGADKAEFLGRWRDMNEIV
HHHHHHHHHHHHHHHHHCCCCCEEEEECCCCCEEEEEECCCCCCCHHHHHHHHHHHHHHH
HGIVLSLGGSISAEHGIGQLKRDELAAIRPGIEMELMHRIKHAFDPAGIMNPGKVLVG
HHHHHHHCCCCCCCCCCCCCCHHHHHHHCCCCHHHHHHHHHHHCCCCCCCCCCCEECC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]