Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is adhP [H]
Identifier: 15887967
GI number: 15887967
Start: 614537
End: 615565
Strand: Direct
Name: adhP [H]
Synonym: Atu0626
Alternate gene names: 15887967
Gene position: 614537-615565 (Clockwise)
Preceding gene: 15887966
Following gene: 159184395
Centisome position: 21.63
GC content: 61.61
Gene sequence:
>1029_bases ATGACTAAAACAATGAAGGCGGCGGTTGTCCGCGCATTTGGAAAACCGCTGACCATCGAGGAAGTGGCAATACCGGATCC CGGCCCCGGTGAAATTCTCATCAACTACAAGGCGACGGGCGTTTGCCACACCGACCTGCACGCCGCAACGGGGGATTGGC CGGTCAAGCCCAACCCGCCCTTCATTCCCGGACATGAAGGTGCAGGTTACGTCGCCAAGATCGGCGCTGGCGTCACCGGC ATCAAGGAGGGCGACCGCGCCGGCACGCCCTGGCTCTACACCGCCTGCGGATGCTGCATTCCCTGCCGTACCGGCTGGGA AACCCTGTGCCCGAGCCAGAAGAACTCAGGTTATTCCGTCAACGGCAGCTTTGCCGAATATGGCCTTGCCGATCCGAAAT TCGTCGGCCGCCTGCCTGACAATCTCGATTTCGGCCCAGCCGCACCCGTGCTCTGCGCCGGCGTTACAGTCTATAAGGGC CTGAAGGAAACCGAAGTCAGGCCCGGTGAATGGGTGGTCATTTCAGGCATTGGCGGGCTTGGCCACATGGCCGTGCAATA TGCGAAAGCCATGGGCATGCATGTGGTTGCCGCCGATATTTTCGACGACAAGCTGGCGCTTGCCAAAAAGCTCGGAGCCG ACGTCGTCGTCAACGGCCGCGCGCCTGACGCGGTGGAGCAAGTGCAAAAGGCAACCGGCGGCGTCCATGGCGCGCTGGTG ACGGCGGTTTCACCGAAGGCCATGGAGCAGGCTTATGGCTTCCTGCGCTCCAAGGGCACGATGGCGCTTGTCGGTCTGCC GCCGGGCTTCATCTCCATTCCGGTGTTCGACACGGTGCTGAAGCGCATCACGGTGCGTGGCTCCATCGTCGGCACGCGGC AGGATCTGGAGGAGGCGTTGACCTTCGCCGGTGAAGGCAAGGTGGCCGCCCACTTCTCGTGGGACAAGCTCGAAAACATC AATGATATCTTCCATCGCATGGAAGAGGGCAAGATCGACGGCCGTATCGTCGTGGATCTCGCCGCCTGA
Upstream 100 bases:
>100_bases ATGCTTCGATTTGCGATGGGTCAATTCCATGACGCTCCATCCCCGTTAATCTCTGCCTGCCGTCGAGGATTTCAGGCGAG CAGAGATTAGGGAGTATGTC
Downstream 100 bases:
>100_bases CGTCAAACCCGGTTGCGGCGCTCACGCAAATGTGTGGCGCCGCTTCCGCCCGCCTTGTTCCGCGAAGGGCGATCTGCGTT ATCCTCCTTTCGCATCCGGG
Product: alcohol dehydrogenase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 342; Mature: 341
Protein sequence:
>342_residues MTKTMKAAVVRAFGKPLTIEEVAIPDPGPGEILINYKATGVCHTDLHAATGDWPVKPNPPFIPGHEGAGYVAKIGAGVTG IKEGDRAGTPWLYTACGCCIPCRTGWETLCPSQKNSGYSVNGSFAEYGLADPKFVGRLPDNLDFGPAAPVLCAGVTVYKG LKETEVRPGEWVVISGIGGLGHMAVQYAKAMGMHVVAADIFDDKLALAKKLGADVVVNGRAPDAVEQVQKATGGVHGALV TAVSPKAMEQAYGFLRSKGTMALVGLPPGFISIPVFDTVLKRITVRGSIVGTRQDLEEALTFAGEGKVAAHFSWDKLENI NDIFHRMEEGKIDGRIVVDLAA
Sequences:
>Translated_342_residues MTKTMKAAVVRAFGKPLTIEEVAIPDPGPGEILINYKATGVCHTDLHAATGDWPVKPNPPFIPGHEGAGYVAKIGAGVTG IKEGDRAGTPWLYTACGCCIPCRTGWETLCPSQKNSGYSVNGSFAEYGLADPKFVGRLPDNLDFGPAAPVLCAGVTVYKG LKETEVRPGEWVVISGIGGLGHMAVQYAKAMGMHVVAADIFDDKLALAKKLGADVVVNGRAPDAVEQVQKATGGVHGALV TAVSPKAMEQAYGFLRSKGTMALVGLPPGFISIPVFDTVLKRITVRGSIVGTRQDLEEALTFAGEGKVAAHFSWDKLENI NDIFHRMEEGKIDGRIVVDLAA >Mature_341_residues TKTMKAAVVRAFGKPLTIEEVAIPDPGPGEILINYKATGVCHTDLHAATGDWPVKPNPPFIPGHEGAGYVAKIGAGVTGI KEGDRAGTPWLYTACGCCIPCRTGWETLCPSQKNSGYSVNGSFAEYGLADPKFVGRLPDNLDFGPAAPVLCAGVTVYKGL KETEVRPGEWVVISGIGGLGHMAVQYAKAMGMHVVAADIFDDKLALAKKLGADVVVNGRAPDAVEQVQKATGGVHGALVT AVSPKAMEQAYGFLRSKGTMALVGLPPGFISIPVFDTVLKRITVRGSIVGTRQDLEEALTFAGEGKVAAHFSWDKLENIN DIFHRMEEGKIDGRIVVDLAA
Specific function: Preferred Specificity Is Towards 1-Propanol. [C]
COG id: COG1064
COG function: function code R; Zn-dependent alcohol dehydrogenases
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the zinc-containing alcohol dehydrogenase family [H]
Homologues:
Organism=Homo sapiens, GI4501933, Length=361, Percent_Identity=28.808864265928, Blast_Score=106, Evalue=3e-23, Organism=Homo sapiens, GI34577061, Length=361, Percent_Identity=28.808864265928, Blast_Score=105, Evalue=6e-23, Organism=Homo sapiens, GI4501929, Length=361, Percent_Identity=29.3628808864266, Blast_Score=102, Evalue=6e-22, Organism=Homo sapiens, GI156627571, Length=285, Percent_Identity=28.4210526315789, Blast_Score=100, Evalue=3e-21, Organism=Homo sapiens, GI71565152, Length=366, Percent_Identity=27.0491803278689, Blast_Score=97, Evalue=2e-20, Organism=Homo sapiens, GI71743840, Length=358, Percent_Identity=27.3743016759777, Blast_Score=92, Evalue=7e-19, Organism=Homo sapiens, GI262073058, Length=358, Percent_Identity=27.3743016759777, Blast_Score=92, Evalue=9e-19, Organism=Homo sapiens, GI194239674, Length=321, Percent_Identity=25.5451713395639, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI13236495, Length=321, Percent_Identity=25.5451713395639, Blast_Score=92, Evalue=1e-18, Organism=Homo sapiens, GI71565154, Length=236, Percent_Identity=30.9322033898305, Blast_Score=90, Evalue=2e-18, Organism=Homo sapiens, GI194239676, Length=232, Percent_Identity=27.1551724137931, Blast_Score=86, Evalue=6e-17, Organism=Homo sapiens, GI156523966, Length=235, Percent_Identity=29.3617021276596, Blast_Score=82, Evalue=7e-16, Organism=Homo sapiens, GI4501939, Length=235, Percent_Identity=29.3617021276596, Blast_Score=82, Evalue=8e-16, Organism=Escherichia coli, GI87081918, Length=337, Percent_Identity=46.2908011869436, Blast_Score=254, Evalue=4e-69, Organism=Escherichia coli, GI1786518, Length=348, Percent_Identity=32.7586206896552, Blast_Score=158, Evalue=5e-40, Organism=Escherichia coli, GI87082401, Length=324, Percent_Identity=32.4074074074074, Blast_Score=125, Evalue=3e-30, Organism=Escherichia coli, GI87082125, Length=220, Percent_Identity=35.4545454545455, Blast_Score=117, Evalue=1e-27, Organism=Escherichia coli, GI1788073, Length=282, Percent_Identity=31.2056737588652, Blast_Score=114, Evalue=7e-27, Organism=Escherichia coli, GI1790045, Length=276, Percent_Identity=33.3333333333333, Blast_Score=112, Evalue=3e-26, Organism=Escherichia coli, GI1788075, Length=319, Percent_Identity=28.8401253918495, Blast_Score=99, Evalue=5e-22, Organism=Escherichia coli, GI226510992, Length=299, Percent_Identity=29.0969899665552, Blast_Score=90, Evalue=2e-19, Organism=Escherichia coli, GI1790485, Length=286, Percent_Identity=29.7202797202797, Blast_Score=87, Evalue=2e-18, Organism=Escherichia coli, GI1786552, Length=370, Percent_Identity=29.1891891891892, Blast_Score=86, Evalue=5e-18, Organism=Escherichia coli, GI1787863, Length=209, Percent_Identity=30.1435406698565, Blast_Score=83, Evalue=2e-17, Organism=Escherichia coli, GI1790718, Length=315, Percent_Identity=26.3492063492064, Blast_Score=79, Evalue=5e-16, Organism=Escherichia coli, GI1788407, Length=254, Percent_Identity=29.5275590551181, Blast_Score=75, Evalue=6e-15, Organism=Escherichia coli, GI1786825, Length=374, Percent_Identity=24.331550802139, Blast_Score=62, Evalue=5e-11, Organism=Caenorhabditis elegans, GI17562584, Length=342, Percent_Identity=40.6432748538012, Blast_Score=239, Evalue=1e-63, Organism=Caenorhabditis elegans, GI17562582, Length=347, Percent_Identity=41.4985590778098, Blast_Score=235, Evalue=3e-62, Organism=Caenorhabditis elegans, GI71988145, Length=342, Percent_Identity=36.5497076023392, Blast_Score=228, Evalue=5e-60, Organism=Caenorhabditis elegans, GI17562876, Length=334, Percent_Identity=32.3353293413174, Blast_Score=138, Evalue=5e-33, Organism=Caenorhabditis elegans, GI17562878, Length=334, Percent_Identity=32.3353293413174, Blast_Score=125, Evalue=4e-29, Organism=Caenorhabditis elegans, GI25146526, Length=248, Percent_Identity=30.6451612903226, Blast_Score=79, Evalue=4e-15, Organism=Caenorhabditis elegans, GI71997431, Length=250, Percent_Identity=30.4, Blast_Score=77, Evalue=1e-14, Organism=Caenorhabditis elegans, GI17507255, Length=266, Percent_Identity=25.9398496240602, Blast_Score=75, Evalue=5e-14, Organism=Saccharomyces cerevisiae, GI6323729, Length=343, Percent_Identity=43.1486880466472, Blast_Score=270, Evalue=2e-73, Organism=Saccharomyces cerevisiae, GI6323961, Length=343, Percent_Identity=44.3148688046647, Blast_Score=266, Evalue=3e-72, Organism=Saccharomyces cerevisiae, GI6319621, Length=343, Percent_Identity=41.9825072886297, Blast_Score=263, Evalue=3e-71, Organism=Saccharomyces cerevisiae, GI6324486, Length=343, Percent_Identity=42.5655976676385, Blast_Score=258, Evalue=1e-69, Organism=Saccharomyces cerevisiae, GI6322619, Length=327, Percent_Identity=29.0519877675841, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6319955, Length=327, Percent_Identity=29.0519877675841, Blast_Score=105, Evalue=1e-23, Organism=Saccharomyces cerevisiae, GI6319949, Length=330, Percent_Identity=29.3939393939394, Blast_Score=102, Evalue=6e-23, Organism=Saccharomyces cerevisiae, GI6323099, Length=323, Percent_Identity=28.1733746130031, Blast_Score=91, Evalue=3e-19, Organism=Saccharomyces cerevisiae, GI6323980, Length=332, Percent_Identity=28.3132530120482, Blast_Score=88, Evalue=2e-18, Organism=Saccharomyces cerevisiae, GI6320033, Length=249, Percent_Identity=33.3333333333333, Blast_Score=86, Evalue=7e-18, Organism=Drosophila melanogaster, GI17137530, Length=307, Percent_Identity=28.6644951140065, Blast_Score=95, Evalue=9e-20, Organism=Drosophila melanogaster, GI17737897, Length=307, Percent_Identity=27.3615635179153, Blast_Score=85, Evalue=6e-17, Organism=Drosophila melanogaster, GI17737895, Length=238, Percent_Identity=30.672268907563, Blast_Score=82, Evalue=4e-16,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR013149 - InterPro: IPR013154 - InterPro: IPR002085 - InterPro: IPR002328 - InterPro: IPR011032 - InterPro: IPR016040 [H]
Pfam domain/function: PF08240 ADH_N; PF00107 ADH_zinc_N [H]
EC number: =1.1.1.1 [H]
Molecular weight: Translated: 36039; Mature: 35908
Theoretical pI: Translated: 6.93; Mature: 6.93
Prosite motif: PS00059 ADH_ZINC
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.0 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 4.4 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 2.1 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTKTMKAAVVRAFGKPLTIEEVAIPDPGPGEILINYKATGVCHTDLHAATGDWPVKPNPP CCCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECEEEECCCCCCCCCCCCCCCCC FIPGHEGAGYVAKIGAGVTGIKEGDRAGTPWLYTACGCCIPCRTGWETLCPSQKNSGYSV CCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCEEE NGSFAEYGLADPKFVGRLPDNLDFGPAAPVLCAGVTVYKGLKETEVRPGEWVVISGIGGL CCCHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCEEEEECCCCH GHMAVQYAKAMGMHVVAADIFDDKLALAKKLGADVVVNGRAPDAVEQVQKATGGVHGALV HHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEE TAVSPKAMEQAYGFLRSKGTMALVGLPPGFISIPVFDTVLKRITVRGSIVGTRQDLEEAL EECCHHHHHHHHHHHHCCCCEEEEECCCCCEECCHHHHHHHHHHHCCEEEECHHHHHHHH TFAGEGKVAAHFSWDKLENINDIFHRMEEGKIDGRIVVDLAA HHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEEC >Mature Secondary Structure TKTMKAAVVRAFGKPLTIEEVAIPDPGPGEILINYKATGVCHTDLHAATGDWPVKPNPP CCHHHHHHHHHCCCCCEEEEEECCCCCCCCEEEEEEECEEEECCCCCCCCCCCCCCCCC FIPGHEGAGYVAKIGAGVTGIKEGDRAGTPWLYTACGCCIPCRTGWETLCPSQKNSGYSV CCCCCCCCCEEEEECCCCCCCCCCCCCCCCHHHHHCCCCCCCCCCHHHHCCCCCCCCEEE NGSFAEYGLADPKFVGRLPDNLDFGPAAPVLCAGVTVYKGLKETEVRPGEWVVISGIGGL CCCHHHCCCCCCHHHCCCCCCCCCCCCCHHHHHHHHHHCCCHHCCCCCCCEEEEECCCCH GHMAVQYAKAMGMHVVAADIFDDKLALAKKLGADVVVNGRAPDAVEQVQKATGGVHGALV HHHHHHHHHHHCCEEEEEHHHHHHHHHHHHCCCCEEEECCCCHHHHHHHHHHCCCCEEEE TAVSPKAMEQAYGFLRSKGTMALVGLPPGFISIPVFDTVLKRITVRGSIVGTRQDLEEAL EECCHHHHHHHHHHHHCCCCEEEEECCCCCEECCHHHHHHHHHHHCCEEEECHHHHHHHH TFAGEGKVAAHFSWDKLENINDIFHRMEEGKIDGRIVVDLAA HHCCCCCEEEEECHHHHHHHHHHHHHHHCCCCCCEEEEEEEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 9659380; 11481432 [H]