Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15887815

Identifier: 15887815

GI number: 15887815

Start: 459236

End: 459649

Strand: Direct

Name: 15887815

Synonym: Atu0468

Alternate gene names: NA

Gene position: 459236-459649 (Clockwise)

Preceding gene: 159184317

Following gene: 159184321

Centisome position: 16.16

GC content: 53.38

Gene sequence:

>414_bases
ATGTCTTCCGATTCCAATTTTTCTGAGATCTCTCCTGAGGAAATGGAGATAATTCAGTCAGTCTTGAAGAGCGCTGGTTA
TAACGCCGCGTTGCTGGGTGATGATCAGCGACAATTCAACACGGCCGCATTTCTTGTAATGAGCCTGTTTCTCGCGGGCG
AGAAATCCGCAGATGCGCTCGCAGCCCAACTGAAACGCCGTCTTGGGAGGGCGAGTTTCCATAGACCCTCCTACCAGTCG
GCGCTTGCGCCTTATGCCATTCGTGGACTGCCCCGCAACATGAGGTATGTCCTTCAATTCTCCCGTAAAGGCTCTGCCCG
ATCAATTGAAGCGGAGGAGCAGTCTTGGGAAAATGAAGGCGGCGCAGTACGCCGTCCCCTTGGTCATCCCCATCACCGTC
CACAACTGTTTTGA

Upstream 100 bases:

>100_bases
TTGGGTGTCATTCAGGCGCAGTGTTAAGTTATCGGTAGACACGTCAAGGGCGCTACTGATTTAGGGCGCGTTACCCTAGC
CCCAATAAGAGGAGGACGAG

Downstream 100 bases:

>100_bases
TCAGGAAGAGCGTGGGCAGTCCCATTATCCATTGCGCCTTTCAGCGAGAGGCGACTCAATAGAACAGAGGATACCGGAGA
CATGATAGAGAGAACAACAA

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 137; Mature: 136

Protein sequence:

>137_residues
MSSDSNFSEISPEEMEIIQSVLKSAGYNAALLGDDQRQFNTAAFLVMSLFLAGEKSADALAAQLKRRLGRASFHRPSYQS
ALAPYAIRGLPRNMRYVLQFSRKGSARSIEAEEQSWENEGGAVRRPLGHPHHRPQLF

Sequences:

>Translated_137_residues
MSSDSNFSEISPEEMEIIQSVLKSAGYNAALLGDDQRQFNTAAFLVMSLFLAGEKSADALAAQLKRRLGRASFHRPSYQS
ALAPYAIRGLPRNMRYVLQFSRKGSARSIEAEEQSWENEGGAVRRPLGHPHHRPQLF
>Mature_136_residues
SSDSNFSEISPEEMEIIQSVLKSAGYNAALLGDDQRQFNTAAFLVMSLFLAGEKSADALAAQLKRRLGRASFHRPSYQSA
LAPYAIRGLPRNMRYVLQFSRKGSARSIEAEEQSWENEGGAVRRPLGHPHHRPQLF

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 15293; Mature: 15162

Theoretical pI: Translated: 9.91; Mature: 9.91

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.9 %Met     (Translated Protein)
2.9 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSSDSNFSEISPEEMEIIQSVLKSAGYNAALLGDDQRQFNTAAFLVMSLFLAGEKSADAL
CCCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHH
AAQLKRRLGRASFHRPSYQSALAPYAIRGLPRNMRYVLQFSRKGSARSIEAEEQSWENEG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCC
GAVRRPLGHPHHRPQLF
CCEECCCCCCCCCCCCC
>Mature Secondary Structure 
SSDSNFSEISPEEMEIIQSVLKSAGYNAALLGDDQRQFNTAAFLVMSLFLAGEKSADAL
CCCCCCCCCCHHHHHHHHHHHHHCCCCEEEECCCHHHHHHHHHHHHHHHHHCCCCHHHH
AAQLKRRLGRASFHRPSYQSALAPYAIRGLPRNMRYVLQFSRKGSARSIEAEEQSWENEG
HHHHHHHHHHHHCCCCCHHHHHHHHHHHCCCHHHHHHHHHHCCCCCCCCCHHHHHHCCCC
GAVRRPLGHPHHRPQLF
CCEECCCCCCCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA