Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

Click here to switch to the map view.

The map label for this gene is 15887807

Identifier: 15887807

GI number: 15887807

Start: 449518

End: 450183

Strand: Direct

Name: 15887807

Synonym: Atu8126

Alternate gene names: NA

Gene position: 449518-450183 (Clockwise)

Preceding gene: 15887806

Following gene: 15887808

Centisome position: 15.82

GC content: 60.51

Gene sequence:

>666_bases
TTGAGCGACGTAGGTGTGTTGCTGCCGTCATCGGCGGAGCCATTCGAAAAGGCGCTTGCCGCCGGTATGTCGGATGACCT
GCCGATACCTTACGCGGTTCTGATGGACCCCTACCAGACGCCCGCACGGTTTCTGCCGTGGCTGGCCGTGCATCATTCGG
TCGATCTCTGGTTTGATGATTGGACCGAAGAGCGCAAGCGGGAGATGATTGCGCAGTGCGCCGGGGTTTCGACGCTCTAT
CCCGCGTCTCCCTTGGGCGCGCTGAAAGGCACGCTTGCCGGGCTGAAACGCTACCTTGCGTTCGTTGATGCGGAAATCGT
GGATCGCATTGCGCATCCGAACCGCTTCACCTTCGGGCGGGCGGTGATCGGACGAACCCCGATAGCGCATCAGCCATTCG
TGGCGCATTACCTTGTCCGCGTCACGCTGACAGCGCCGAAGAACCGCTTTCAGATTGGCCGCAGCGCCTTCGGGCGGGCG
GCAATGACGGCCATCGACCTTGAGCCTATTCGCCGCGCCAAACACGCCATGAAGACCGCCAAGACGCCGGAAACGATCTA
TTCGGTTTCCTTCGCATGGCGGCGCGGCATCACCTTTAACGACAACATTTTCATCGACGGAAGCCATGCCATCGGCGGTT
ACATGGATCGCAAGCGGCTGGATTGA

Upstream 100 bases:

>100_bases
TGCGCCGCCCTTCGGCAATGTCGTTCTCCCTGAAAAAGAGGATAGCGCCCATGGCAAGCTCAACCGGCGTAAACGGCCAG
ACCGGCGCACCGCTGAATGA

Downstream 100 bases:

>100_bases
GGGTAACGACACATGCAGCGCACTTCCTTTGCAGAAGCTGAAATCGCCGATCATGCAGATTTCGAAGCCATCGGCTTGCA
GGCGCAGGCCGCAACAGATG

Product: putative phage tail protein I

Products: NA

Alternate protein names: Bacteriophage P2-Related Tail Formation Protein

Number of amino acids: Translated: 221; Mature: 220

Protein sequence:

>221_residues
MSDVGVLLPSSAEPFEKALAAGMSDDLPIPYAVLMDPYQTPARFLPWLAVHHSVDLWFDDWTEERKREMIAQCAGVSTLY
PASPLGALKGTLAGLKRYLAFVDAEIVDRIAHPNRFTFGRAVIGRTPIAHQPFVAHYLVRVTLTAPKNRFQIGRSAFGRA
AMTAIDLEPIRRAKHAMKTAKTPETIYSVSFAWRRGITFNDNIFIDGSHAIGGYMDRKRLD

Sequences:

>Translated_221_residues
MSDVGVLLPSSAEPFEKALAAGMSDDLPIPYAVLMDPYQTPARFLPWLAVHHSVDLWFDDWTEERKREMIAQCAGVSTLY
PASPLGALKGTLAGLKRYLAFVDAEIVDRIAHPNRFTFGRAVIGRTPIAHQPFVAHYLVRVTLTAPKNRFQIGRSAFGRA
AMTAIDLEPIRRAKHAMKTAKTPETIYSVSFAWRRGITFNDNIFIDGSHAIGGYMDRKRLD
>Mature_220_residues
SDVGVLLPSSAEPFEKALAAGMSDDLPIPYAVLMDPYQTPARFLPWLAVHHSVDLWFDDWTEERKREMIAQCAGVSTLYP
ASPLGALKGTLAGLKRYLAFVDAEIVDRIAHPNRFTFGRAVIGRTPIAHQPFVAHYLVRVTLTAPKNRFQIGRSAFGRAA
MTAIDLEPIRRAKHAMKTAKTPETIYSVSFAWRRGITFNDNIFIDGSHAIGGYMDRKRLD

Specific function: Unknown

COG id: COG4385

COG function: function code R; Bacteriophage P2-related tail formation protein

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 24659; Mature: 24528

Theoretical pI: Translated: 9.79; Mature: 9.79

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.5 %Cys     (Translated Protein)
3.2 %Met     (Translated Protein)
3.6 %Cys+Met (Translated Protein)
0.5 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
3.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSDVGVLLPSSAEPFEKALAAGMSDDLPIPYAVLMDPYQTPARFLPWLAVHHSVDLWFDD
CCCCCEECCCCCCHHHHHHHCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHCCEEEECH
WTEERKREMIAQCAGVSTLYPASPLGALKGTLAGLKRYLAFVDAEIVDRIAHPNRFTFGR
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
AVIGRTPIAHQPFVAHYLVRVTLTAPKNRFQIGRSAFGRAAMTAIDLEPIRRAKHAMKTA
HHHCCCCCCCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KTPETIYSVSFAWRRGITFNDNIFIDGSHAIGGYMDRKRLD
CCCHHHHHHHHHHHCCCEECCCEEEECCCCCCCCCHHHCCC
>Mature Secondary Structure 
SDVGVLLPSSAEPFEKALAAGMSDDLPIPYAVLMDPYQTPARFLPWLAVHHSVDLWFDD
CCCCEECCCCCCHHHHHHHCCCCCCCCCCHHEEECCCCCHHHHHHHHHHHHCCEEEECH
WTEERKREMIAQCAGVSTLYPASPLGALKGTLAGLKRYLAFVDAEIVDRIAHPNRFTFGR
HHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCHHH
AVIGRTPIAHQPFVAHYLVRVTLTAPKNRFQIGRSAFGRAAMTAIDLEPIRRAKHAMKTA
HHHCCCCCCCCCHHHHHHHHEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHC
KTPETIYSVSFAWRRGITFNDNIFIDGSHAIGGYMDRKRLD
CCCHHHHHHHHHHHCCCEECCCEEEECCCCCCCCCHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA