Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887806
Identifier: 15887806
GI number: 15887806
Start: 448758
End: 449309
Strand: Direct
Name: 15887806
Synonym: Atu0454
Alternate gene names: NA
Gene position: 448758-449309 (Clockwise)
Preceding gene: 15887805
Following gene: 15887807
Centisome position: 15.79
GC content: 57.79
Gene sequence:
>552_bases ATGGCCAGTTTGGTGGACCAGATCACGGACCTTTATGTACGGATGGCCGAACTTGAGCGCCGGAACCGCAACCGGCGGCG CAAGGGTACGATTGCGGAAGTCAGCGACGACAAATCCAAGTACCGCGTGAAGCTGTCCGAACAGGCGGGAAAGCCCTATC TGACACCTTGGATCAAGGCGCGGACGCTTGCTGCCGGTGGCGTCAAGGTTGATGTCCTCTACAGCGTCGGCGAACAGGTG GATGTTGTTTCCGAAAACGGCGAAATGACCGATGCCCAGATAGATTTTTCCACCTATAGCGACGACAACGCGCGCGAGAA CAGTGACACGCCGTTTCATATCAAGATCGGCGATACCGTCATTGAAGCATCAGCGGGACAGGCGAAAGTCACGTCGCCAA AGGTGATTGTTGAATCGCCGAACGTGCAGCTCGGCGGCGACGGCGGCAAGCGTGTCGCCCGGATCGGCGACCTTGTACAT GTCATGTCCGGTTCTTCATCGGGCAAGTGGCCGATTGTCGAAGGCTCGGAACACGTCTTCGCGGTGGACTGA
Upstream 100 bases:
>100_bases CAGGCGATGCCAACGAATTGCAGACGGCCATGCGGCGCTACGGTCTTATCTATGACGAGGCCGACGCCATGTTGATCACA CCTTACGAGGGGTCGCCCTG
Downstream 100 bases:
>100_bases GGAACGCCCCATGAAAAATTACAAGGTTCGAACCGGCTGCGAAATCGCCGGGCGCTGGCGGTCGGCTGGCGAAATCATCC CCCTGACCGACGACGAAGCC
Product: hypothetical protein
Products: NA
Alternate protein names: Phage Baseplate Assembly Protein V
Number of amino acids: Translated: 183; Mature: 182
Protein sequence:
>183_residues MASLVDQITDLYVRMAELERRNRNRRRKGTIAEVSDDKSKYRVKLSEQAGKPYLTPWIKARTLAAGGVKVDVLYSVGEQV DVVSENGEMTDAQIDFSTYSDDNARENSDTPFHIKIGDTVIEASAGQAKVTSPKVIVESPNVQLGGDGGKRVARIGDLVH VMSGSSSGKWPIVEGSEHVFAVD
Sequences:
>Translated_183_residues MASLVDQITDLYVRMAELERRNRNRRRKGTIAEVSDDKSKYRVKLSEQAGKPYLTPWIKARTLAAGGVKVDVLYSVGEQV DVVSENGEMTDAQIDFSTYSDDNARENSDTPFHIKIGDTVIEASAGQAKVTSPKVIVESPNVQLGGDGGKRVARIGDLVH VMSGSSSGKWPIVEGSEHVFAVD >Mature_182_residues ASLVDQITDLYVRMAELERRNRNRRRKGTIAEVSDDKSKYRVKLSEQAGKPYLTPWIKARTLAAGGVKVDVLYSVGEQVD VVSENGEMTDAQIDFSTYSDDNARENSDTPFHIKIGDTVIEASAGQAKVTSPKVIVESPNVQLGGDGGKRVARIGDLVHV MSGSSSGKWPIVEGSEHVFAVD
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19938; Mature: 19806
Theoretical pI: Translated: 5.76; Mature: 5.76
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.2 %Met (Translated Protein) 2.2 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.6 %Met (Mature Protein) 1.6 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MASLVDQITDLYVRMAELERRNRNRRRKGTIAEVSDDKSKYRVKLSEQAGKPYLTPWIKA CCHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCEEEEEEEHHCCCCCCCCCCEE RTLAAGGVKVDVLYSVGEQVDVVSENGEMTDAQIDFSTYSDDNARENSDTPFHIKIGDTV EEEECCCEEEEEEECCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECCEE IEASAGQAKVTSPKVIVESPNVQLGGDGGKRVARIGDLVHVMSGSSSGKWPIVEGSEHVF EECCCCCEECCCCEEEEECCCEEECCCCCHHHHHHHHHHHEECCCCCCCCEEEECCCEEE AVD EEC >Mature Secondary Structure ASLVDQITDLYVRMAELERRNRNRRRKGTIAEVSDDKSKYRVKLSEQAGKPYLTPWIKA CHHHHHHHHHHHHHHHHHHHHCCHHHCCCEEEECCCCCEEEEEEEHHCCCCCCCCCCEE RTLAAGGVKVDVLYSVGEQVDVVSENGEMTDAQIDFSTYSDDNARENSDTPFHIKIGDTV EEEECCCEEEEEEECCCCEEEEEECCCCEEEEEEEEEECCCCCCCCCCCCCEEEEECCEE IEASAGQAKVTSPKVIVESPNVQLGGDGGKRVARIGDLVHVMSGSSSGKWPIVEGSEHVF EECCCCCEECCCCEEEEECCCEEECCCCCHHHHHHHHHHHEECCCCCCCCEEEECCCEEE AVD EEC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA