Click here to switch to the map view.

The map label for this gene is yesQ [H]

Identifier: 15887742

GI number: 15887742

Start: 386062

End: 386883

Strand: Direct

Name: yesQ [H]

Synonym: Atu0393

Alternate gene names: 15887742

Gene position: 386062-386883 (Clockwise)

Preceding gene: 15887741

Following gene: 15887743

Centisome position: 13.59

GC content: 59.25

Gene sequence:

>822_bases
ATGGCCGTATTCCGCAAATATTTCCCGCATCTCGTCCTTGCGCTGGGCGCTTTCGTGATGCTCCTGCCGTTCTATTGGAT
GGCGCTGACGTCTATCCGCTCGCCGGCGGAAATATTCGACGTCTCGCTCTGGCCCATTCCGCAGAAATTCGACGCGGCCG
ACAATTACGCCCGGGCGGCAGGTCAGGTGCCGATGGCACGCTTCATGCTGAACGGCGTCATCGTCTGCGTCGGCATTCTC
GTCGTGCAAATCCTCACATCGGTTCCGGCGGCCTATGCTCTGGCAAAACTCCGCTTCCCGGGACGCAAGCTGCTGCTGGG
TCTCGTCATCGCAGCGCTCTGCGTGCCCATCCAGGCGCTGGCGTTGCCGCTCTTCGTCGGTCTGGCCAAGACGCAGCTTT
TGAATACTTATTTCGCGATGATGATGCCGTTCTTTCTTTCGGTCTTCGCCATCTTCCTGTTCAACCAGTCCTTCCGCAGC
TACCCCGATGAAATCATCGAGGCTGCCCGTATGGATGGTTTCTCGGAAATGGAGATTTGCTGGGGGCTGGTGCTTCGCGG
CTCTTTGCCGTCGCTTGCGGCTTTCTCGATCTTTTCGCTCGTTGCCCACTGGAACGATCTCTACTGGCCGATGATCGTCA
TCTCCGACACCAATCTCGCCCCGCCGCCGCTTGGCATGATGCTTTTCGCCGATGTCGAATCCGGCGCGAATTACGGTGCG
CTGATGGCGGGCGCCACACTGATTACCGCGCCGATGGTGCTGTGCTTCCTCCTCGCACGGCGGCACTTCATCGCCGGTAT
TACCATGACCGGCGTCAAGTGA

Upstream 100 bases:

>100_bases
ACACCGGTTATGCCGCCGCGCTGACGATTATCTTCCTCGTCATCGTGCTGATCCTGTCGATTGGCCAGACGCTGCATATG
GACCGGAAGGTGCATTACTG

Downstream 100 bases:

>100_bases
TGCCGTTCAGACTTCCTCCTCCCAACCTTTCTGGAGACTGACATGAAACTCAACCGACGCGCCGTGATGGGCGGTCTGGC
TCTTGGCATGGCTTTTGCTG

Product: ABC transporter, membrane spanning protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 273; Mature: 272

Protein sequence:

>273_residues
MAVFRKYFPHLVLALGAFVMLLPFYWMALTSIRSPAEIFDVSLWPIPQKFDAADNYARAAGQVPMARFMLNGVIVCVGIL
VVQILTSVPAAYALAKLRFPGRKLLLGLVIAALCVPIQALALPLFVGLAKTQLLNTYFAMMMPFFLSVFAIFLFNQSFRS
YPDEIIEAARMDGFSEMEICWGLVLRGSLPSLAAFSIFSLVAHWNDLYWPMIVISDTNLAPPPLGMMLFADVESGANYGA
LMAGATLITAPMVLCFLLARRHFIAGITMTGVK

Sequences:

>Translated_273_residues
MAVFRKYFPHLVLALGAFVMLLPFYWMALTSIRSPAEIFDVSLWPIPQKFDAADNYARAAGQVPMARFMLNGVIVCVGIL
VVQILTSVPAAYALAKLRFPGRKLLLGLVIAALCVPIQALALPLFVGLAKTQLLNTYFAMMMPFFLSVFAIFLFNQSFRS
YPDEIIEAARMDGFSEMEICWGLVLRGSLPSLAAFSIFSLVAHWNDLYWPMIVISDTNLAPPPLGMMLFADVESGANYGA
LMAGATLITAPMVLCFLLARRHFIAGITMTGVK
>Mature_272_residues
AVFRKYFPHLVLALGAFVMLLPFYWMALTSIRSPAEIFDVSLWPIPQKFDAADNYARAAGQVPMARFMLNGVIVCVGILV
VQILTSVPAAYALAKLRFPGRKLLLGLVIAALCVPIQALALPLFVGLAKTQLLNTYFAMMMPFFLSVFAIFLFNQSFRSY
PDEIIEAARMDGFSEMEICWGLVLRGSLPSLAAFSIFSLVAHWNDLYWPMIVISDTNLAPPPLGMMLFADVESGANYGAL
MAGATLITAPMVLCFLLARRHFIAGITMTGVK

Specific function: Part of a binding-protein-dependent transport system. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG0395

COG function: function code G; ABC-type sugar transport system, permease component

Gene ontology:

Cell location: Cell membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1789860, Length=266, Percent_Identity=29.3233082706767, Blast_Score=117, Evalue=1e-27,
Organism=Escherichia coli, GI1787571, Length=268, Percent_Identity=27.2388059701493, Blast_Score=80, Evalue=1e-16,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 30047; Mature: 29915

Theoretical pI: Translated: 8.60; Mature: 8.60

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
5.9 %Met     (Translated Protein)
7.3 %Cys+Met (Translated Protein)
1.5 %Cys     (Mature Protein)
5.5 %Met     (Mature Protein)
7.0 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAVFRKYFPHLVLALGAFVMLLPFYWMALTSIRSPAEIFDVSLWPIPQKFDAADNYARAA
CCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHH
GQVPMARFMLNGVIVCVGILVVQILTSVPAAYALAKLRFPGRKLLLGLVIAALCVPIQAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALPLFVGLAKTQLLNTYFAMMMPFFLSVFAIFLFNQSFRSYPDEIIEAARMDGFSEMEIC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHH
WGLVLRGSLPSLAAFSIFSLVAHWNDLYWPMIVISDTNLAPPPLGMMLFADVESGANYGA
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHEEEEHHCCCCCHH
LMAGATLITAPMVLCFLLARRHFIAGITMTGVK
HHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCC
>Mature Secondary Structure 
AVFRKYFPHLVLALGAFVMLLPFYWMALTSIRSPAEIFDVSLWPIPQKFDAADNYARAA
CHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCCCCCCCCHHHHHHHH
GQVPMARFMLNGVIVCVGILVVQILTSVPAAYALAKLRFPGRKLLLGLVIAALCVPIQAL
CCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHH
ALPLFVGLAKTQLLNTYFAMMMPFFLSVFAIFLFNQSFRSYPDEIIEAARMDGFSEMEIC
HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCHHHHHHHHHCCCCHHHHHH
WGLVLRGSLPSLAAFSIFSLVAHWNDLYWPMIVISDTNLAPPPLGMMLFADVESGANYGA
HHHHHHCCCCHHHHHHHHHHHHHHHCCCCCEEEEECCCCCCCCCCHHEEEEHHCCCCCHH
LMAGATLITAPMVLCFLLARRHFIAGITMTGVK
HHHHHHHHHHHHHHHHHHHHHHHHHCCEECCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9384377 [H]