Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is engB
Identifier: 15887733
GI number: 15887733
Start: 375413
End: 376066
Strand: Reverse
Name: engB
Synonym: Atu0383
Alternate gene names: 15887733
Gene position: 376066-375413 (Counterclockwise)
Preceding gene: 159184283
Following gene: 159184282
Centisome position: 13.23
GC content: 59.48
Gene sequence:
>654_bases ATGAGTGAGACCGGCACGGCAACCGAAAAGCCCCTGTTCGGGCGACCCTGGATTTTCATTCGCGGCGTTCCCGCGATGAA ATTCCTGCCGCCTGAGGGCCCGCCGGAGATTGCATTTGCCGGTCGCTCGAACGTCGGCAAGTCCTCGCTCATCAACGCAT TGGTGGGTCACAAGGGACTTGCACGCACCTCCAACACCCCCGGACGCACCCAGGAACTGAACTATTTCGTTCCCGAAGGT TATTCCGGCGAGCCGGGCGACCTGCCGCCGATGGCGCTGGTCGACATGCCGGGTTACGGTTATGCGCAGGCACCCAAGGA TCATGTCGATGCCTGGACGAAACTTGTCTTCGATTATCTGCGTGGCCGCGCGACGCTGAAGCGCGTTTACGTGCTGATCG ATTCCCGCCATGGCATCAAGAAGAACGACGAAGAGGTCCTGAGCCTGCTCGACAAGGCGGCCGTGTCCTATCAGGTCGTG CTGACGAAGACGGACAAGATCAAGGACGTTGGCGTTCCCCGGCTGATTGGCGAAACGCTGGAGAAAATCCGCAAGCGTCC CGCTGCCTATCCCGAAGTTCTTGCCACCTCGTCGGAAAAATCCTTCGGGCTGGACGATCTGCGGGCTGAGATCGTCAGAA CGGTTTTGCTCTAA
Upstream 100 bases:
>100_bases CCATCAGCCAGCAGGCCCTCATCATGAAGCGTCACGGCGCCAAGATCGAACTGTTCGATAATATAAAAGGGCTGTTCAAA CGAAAGCCGGTGCAATCGAA
Downstream 100 bases:
>100_bases AGCGTTTTCGCGTCAGGCGATGGTGAAAAGCAGAACGGCGGTCCAGAGCATCGCCGTCAGCGCCAGAAGCCGCCAGAAGC GCACGGAATTCCAGACTTCC
Product: ribosome biogenesis GTP-binding protein YsxC
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 217; Mature: 216
Protein sequence:
>217_residues MSETGTATEKPLFGRPWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEG YSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLSLLDKAAVSYQVV LTKTDKIKDVGVPRLIGETLEKIRKRPAAYPEVLATSSEKSFGLDDLRAEIVRTVLL
Sequences:
>Translated_217_residues MSETGTATEKPLFGRPWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEG YSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLSLLDKAAVSYQVV LTKTDKIKDVGVPRLIGETLEKIRKRPAAYPEVLATSSEKSFGLDDLRAEIVRTVLL >Mature_216_residues SETGTATEKPLFGRPWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVGHKGLARTSNTPGRTQELNYFVPEGY SGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYLRGRATLKRVYVLIDSRHGIKKNDEEVLSLLDKAAVSYQVVL TKTDKIKDVGVPRLIGETLEKIRKRPAAYPEVLATSSEKSFGLDDLRAEIVRTVLL
Specific function: Necessary for normal cell division and for the maintenance of normal septation
COG id: COG0218
COG function: function code R; Predicted GTPase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 G (guanine nucleotide-binding) domain
Homologues:
Organism=Homo sapiens, GI56549685, Length=185, Percent_Identity=35.6756756756757, Blast_Score=99, Evalue=2e-21, Organism=Homo sapiens, GI56549687, Length=145, Percent_Identity=31.0344827586207, Blast_Score=68, Evalue=5e-12, Organism=Escherichia coli, GI145693205, Length=197, Percent_Identity=37.5634517766497, Blast_Score=121, Evalue=4e-29, Organism=Saccharomyces cerevisiae, GI6320543, Length=191, Percent_Identity=28.2722513089005, Blast_Score=74, Evalue=3e-14,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): ENGB_AGRT5 (Q8UIB4)
Other databases:
- EMBL: AE007869 - PIR: AG2623 - PIR: F97405 - RefSeq: NP_353414.1 - ProteinModelPortal: Q8UIB4 - SMR: Q8UIB4 - STRING: Q8UIB4 - GeneID: 1132421 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0383 - eggNOG: COG0218 - HOGENOM: HBG447097 - OMA: DVKEDWQ - PhylomeDB: Q8UIB4 - ProtClustDB: PRK00454 - BioCyc: ATUM176299-1:ATU0383-MONOMER - GO: GO:0005622 - HAMAP: MF_00321 - InterPro: IPR019987 - InterPro: IPR002917 - TIGRFAMs: TIGR03598
Pfam domain/function: PF01926 MMR_HSR1
EC number: NA
Molecular weight: Translated: 23865; Mature: 23734
Theoretical pI: Translated: 9.63; Mature: 9.63
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 1.8 %Met (Translated Protein) 1.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.4 %Met (Mature Protein) 1.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSETGTATEKPLFGRPWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVGHKGL CCCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCC ARTSNTPGRTQELNYFVPEGYSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYL CCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH RGRATLKRVYVLIDSRHGIKKNDEEVLSLLDKAAVSYQVVLTKTDKIKDVGVPRLIGETL HHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCHHHCCCHHHHHHHH EKIRKRPAAYPEVLATSSEKSFGLDDLRAEIVRTVLL HHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHC >Mature Secondary Structure SETGTATEKPLFGRPWIFIRGVPAMKFLPPEGPPEIAFAGRSNVGKSSLINALVGHKGL CCCCCCCCCCCCCCCEEEEECCCCCCCCCCCCCCCEEECCCCCCCHHHHHHHHHCCCCC ARTSNTPGRTQELNYFVPEGYSGEPGDLPPMALVDMPGYGYAQAPKDHVDAWTKLVFDYL CCCCCCCCCCCCCEEECCCCCCCCCCCCCCEEEEECCCCCCCCCCHHHHHHHHHHHHHHH RGRATLKRVYVLIDSRHGIKKNDEEVLSLLDKAAVSYQVVLTKTDKIKDVGVPRLIGETL HHHHHHHHEEEEEECCCCCCCCHHHHHHHHHHHHHEEEEEEECCCCHHHCCCHHHHHHHH EKIRKRPAAYPEVLATSSEKSFGLDDLRAEIVRTVLL HHHHHCCCCCHHHHHCCCCCCCCHHHHHHHHHHHHHC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194