Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887720
Identifier: 15887720
GI number: 15887720
Start: 363158
End: 363754
Strand: Reverse
Name: 15887720
Synonym: Atu0369
Alternate gene names: NA
Gene position: 363754-363158 (Counterclockwise)
Preceding gene: 15887721
Following gene: 15887716
Centisome position: 12.8
GC content: 60.3
Gene sequence:
>597_bases ATGCCGACGGCAAGTGAAGTAAGGCTCTATCTGACAGGGCTGTGGCTGCTGCTGCTCGGCGACCATAATGGCGCGCGGTA TCTGGATCTTTCCGAGCGCGGAATGTGGCGATCCTTCTATTCCGCGTTGTGGTGCCTGCCGGCCATGCTGGTTTCCTGGC TTTGGCTGCGCGCCGCCTTTCTGGCCAGCGTTCCACCTGGAGCCGAAACCGGCTTCCTCTTCTTCTTCCGCCTGGCCATG GTCGAGGCCATCTGCTGGATCGTGCCGCTGCTGTTGATCGGCATGCTGCTCTACGCCTTTGGCGCCCGGGAAAAATTCGC GCCGCTCGTCACCACCGTGAACTGGCTGTCGTTGCCCTTTTCCTATGCCTATGCGGTCCTGATCCTGATCGCATTCTTTC TGCCGCCTCTGCAGGGGCTGATCGCCATTCTGTGGCTGGCACTGCTTCTGTCGCTGGTCTTCGCCTTTTCGCGGATCGTC AGATTTTTCATCCGCGACCAGTCGCTGCTCGTCTCGGCAGTGGTCATGACGCTGCTGGTGCCCGCCATGTTGCTGTCAGA GGCATTGCAGCGTTTTCTCGGCGTCTATCCCGCCTGA
Upstream 100 bases:
>100_bases GTCGGGCAGACCATGCACATGGTCGATGAACGCGTGGCAGTTGCCGATCTCGAGACGCTGACGCGCATTTACGAGACCTT CATCGAACGCTGGTTCGCCC
Downstream 100 bases:
>100_bases GAGGCGGCGGGGCCTTCGATCAGTCCGCGTCTTCCGTCATTTCAATTTCAGGGCGGCGGCGCGGCGGAATGACATCGGGA TAATCGACCTGCATGAAATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 198; Mature: 197
Protein sequence:
>198_residues MPTASEVRLYLTGLWLLLLGDHNGARYLDLSERGMWRSFYSALWCLPAMLVSWLWLRAAFLASVPPGAETGFLFFFRLAM VEAICWIVPLLLIGMLLYAFGAREKFAPLVTTVNWLSLPFSYAYAVLILIAFFLPPLQGLIAILWLALLLSLVFAFSRIV RFFIRDQSLLVSAVVMTLLVPAMLLSEALQRFLGVYPA
Sequences:
>Translated_198_residues MPTASEVRLYLTGLWLLLLGDHNGARYLDLSERGMWRSFYSALWCLPAMLVSWLWLRAAFLASVPPGAETGFLFFFRLAM VEAICWIVPLLLIGMLLYAFGAREKFAPLVTTVNWLSLPFSYAYAVLILIAFFLPPLQGLIAILWLALLLSLVFAFSRIV RFFIRDQSLLVSAVVMTLLVPAMLLSEALQRFLGVYPA >Mature_197_residues PTASEVRLYLTGLWLLLLGDHNGARYLDLSERGMWRSFYSALWCLPAMLVSWLWLRAAFLASVPPGAETGFLFFFRLAMV EAICWIVPLLLIGMLLYAFGAREKFAPLVTTVNWLSLPFSYAYAVLILIAFFLPPLQGLIAILWLALLLSLVFAFSRIVR FFIRDQSLLVSAVVMTLLVPAMLLSEALQRFLGVYPA
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 22342; Mature: 22211
Theoretical pI: Translated: 9.09; Mature: 9.09
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.0 %Cys (Translated Protein) 3.5 %Met (Translated Protein) 4.5 %Cys+Met (Translated Protein) 1.0 %Cys (Mature Protein) 3.0 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MPTASEVRLYLTGLWLLLLGDHNGARYLDLSERGMWRSFYSALWCLPAMLVSWLWLRAAF CCCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASVPPGAETGFLFFFRLAMVEAICWIVPLLLIGMLLYAFGAREKFAPLVTTVNWLSLPF HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SYAYAVLILIAFFLPPLQGLIAILWLALLLSLVFAFSRIVRFFIRDQSLLVSAVVMTLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAMLLSEALQRFLGVYPA HHHHHHHHHHHHHCCCCC >Mature Secondary Structure PTASEVRLYLTGLWLLLLGDHNGARYLDLSERGMWRSFYSALWCLPAMLVSWLWLRAAF CCHHHHHHHHHHHHHHHHCCCCCCEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH LASVPPGAETGFLFFFRLAMVEAICWIVPLLLIGMLLYAFGAREKFAPLVTTVNWLSLPF HHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHH SYAYAVLILIAFFLPPLQGLIAILWLALLLSLVFAFSRIVRFFIRDQSLLVSAVVMTLLV HHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH PAMLLSEALQRFLGVYPA HHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA