Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is lnt
Identifier: 15887711
GI number: 15887711
Start: 354024
End: 355613
Strand: Direct
Name: lnt
Synonym: Atu0360
Alternate gene names: 15887711
Gene position: 354024-355613 (Clockwise)
Preceding gene: 159184275
Following gene: 159184276
Centisome position: 12.46
GC content: 59.81
Gene sequence:
>1590_bases ATGGAGCGTCTTGCAGGCAGGGTAATGCTGGCCGGCGGCATGAGCCGCGCAGTGATGGCGATTGCTGCGGGTGCTGTCGG GGCGCTCGCTTTGCCTCCATTCGGCTTTTTCGCAGCGCTTTTTTTCTCTTTCACCTTGCTTGTCTGGCTCGTGGACGGCT GCACCGGCAAGCCGGGTGGTGGTCTCTTCAGCCGCATTCTGCCGGCTTTCGGCATCGGCTGGTGTTTCGGGTTTGGTTAT TTCGTGGCAGGCCTGTGGTGGCTGGGCAATGCTCTTCTACTGGAAGCGGATGAATTCGCCTGGGCCTTGCCGCTCGCCAT CCTCGGTCTGCCGGCACTGCTGGCGCTGTTTTACGGTTTTGCCGTCGCGGCCGCCAATCTCCTCTGGTCGGACGGCCTTG GTCGCATTGCGGCGCTTGCCGCCGCCTTCGGCGTTTCGGAATGGTTGCGCAGTTTCCTCGCGACCGGCTTTCCCTGGAAC GCCATCGGCTATGGCATCATGCCCATCCCGATCATGATGCAGTCTGCGCACTTGCTCGGTCTTCTCAGCATCACGACGCT GGCGGTTTTCATTTTCGCTTCACCAGCGCTGATCGGTACGAAAAAAGGCATGGGACCAGGACTGGCGCTGGCAGGCCTAT TGCTTGCGGCCCACTTCGGTTATGGCTTTTACCGCCTGCAGACACCAGCGGAGACGCCGGCAGACGCCCTGACCGTCCGC ATCGTGCAGCCGGCCATCGATCAATCCCGCAAGATGCTGAATACTGACCGTGCCGAGATTTTCGCAGAGCACCTGCGGTT GTCGGCCCTGCCGCCGGGCGAAGGGAAAAAACGCCCCGACATCATCGTCTGGCCGGAAACCTCCGTGCCGTTCATCCTGA CGCAAAATCCGGATGCGCTCGCGGAAATCGCCAGTACGCTCGAGGATGGCCAGGTGCTGTTCACCGGCGCCGTCAGGATG GAAGATCAGGGAGCCGGCCGGCCGCCCCGTTATTACAATTCGGTCTATGCGATCGACAGCCAGGGCGAGATCATCGGCGC GACCGACAAGGTGCATCTGACGCCCTTTGGCGAATACGTTCCCTTTGAAGGCATCCTGCGGGAATTCGGCATCGACAATG TCATTGCCCTGCCGGGTGGCTTTTCCGCCGCCTCGTCGCGCACGCCGCTCACGCTCCCTTCAGGCAAGACTTTCTATCCC CTGATCTGTTACGAGATCATTTTCCCGGGTGAGATGACGCCGGGCCTTCAGGGGGCGGCGGCGATCCTAAATGTGACGAA TGACGGCTGGTTTGGTGATACACCCGGTCCCTACCAGCATTTTCTGCAGGCACGGGTACGCGCCGTTGAGACGGGCGTGC CGGTGATTCGCGGCGCCAATACCGGAATTTCCGCCGTCATAGACCCCTATGGCCGCATTATTGCCGGGCTGGACTATGGT CGGGTGGGAATTCTTGACGCCACTTTGAGTGGTGGGTCTAATGACGCATTTACTTACGACACACATCGGACGTATTTCTG GTTGATTTTTTCAATCTTGATGATCGTTGCGGTATTTCCCGCCTTGAGTTTTGCTCGGCGCCAGAATTGA
Upstream 100 bases:
>100_bases ACTGCGAATCTTTTTTCCTTTACGCCGGGTTTGAGGGGAAATTCCGTGGCGCGGCCTTGCCGGGAGCGGGCTTTTCCAGA CGCGCATAAACGGAGATGGC
Downstream 100 bases:
>100_bases CCGGGAACCCCTGTAATTGCATAGTGAATACGTCAGTCGTAAAACAAGTTTAGACGCTGTCGAATTGCCGACTCATTTCT TCGAATAGTAGTGAAACGAG
Product: apolipoprotein N-acyltransferase
Products: NA
Alternate protein names: ALP N-acyltransferase
Number of amino acids: Translated: 529; Mature: 529
Protein sequence:
>529_residues MERLAGRVMLAGGMSRAVMAIAAGAVGALALPPFGFFAALFFSFTLLVWLVDGCTGKPGGGLFSRILPAFGIGWCFGFGY FVAGLWWLGNALLLEADEFAWALPLAILGLPALLALFYGFAVAAANLLWSDGLGRIAALAAAFGVSEWLRSFLATGFPWN AIGYGIMPIPIMMQSAHLLGLLSITTLAVFIFASPALIGTKKGMGPGLALAGLLLAAHFGYGFYRLQTPAETPADALTVR IVQPAIDQSRKMLNTDRAEIFAEHLRLSALPPGEGKKRPDIIVWPETSVPFILTQNPDALAEIASTLEDGQVLFTGAVRM EDQGAGRPPRYYNSVYAIDSQGEIIGATDKVHLTPFGEYVPFEGILREFGIDNVIALPGGFSAASSRTPLTLPSGKTFYP LICYEIIFPGEMTPGLQGAAAILNVTNDGWFGDTPGPYQHFLQARVRAVETGVPVIRGANTGISAVIDPYGRIIAGLDYG RVGILDATLSGGSNDAFTYDTHRTYFWLIFSILMIVAVFPALSFARRQN
Sequences:
>Translated_529_residues MERLAGRVMLAGGMSRAVMAIAAGAVGALALPPFGFFAALFFSFTLLVWLVDGCTGKPGGGLFSRILPAFGIGWCFGFGY FVAGLWWLGNALLLEADEFAWALPLAILGLPALLALFYGFAVAAANLLWSDGLGRIAALAAAFGVSEWLRSFLATGFPWN AIGYGIMPIPIMMQSAHLLGLLSITTLAVFIFASPALIGTKKGMGPGLALAGLLLAAHFGYGFYRLQTPAETPADALTVR IVQPAIDQSRKMLNTDRAEIFAEHLRLSALPPGEGKKRPDIIVWPETSVPFILTQNPDALAEIASTLEDGQVLFTGAVRM EDQGAGRPPRYYNSVYAIDSQGEIIGATDKVHLTPFGEYVPFEGILREFGIDNVIALPGGFSAASSRTPLTLPSGKTFYP LICYEIIFPGEMTPGLQGAAAILNVTNDGWFGDTPGPYQHFLQARVRAVETGVPVIRGANTGISAVIDPYGRIIAGLDYG RVGILDATLSGGSNDAFTYDTHRTYFWLIFSILMIVAVFPALSFARRQN >Mature_529_residues MERLAGRVMLAGGMSRAVMAIAAGAVGALALPPFGFFAALFFSFTLLVWLVDGCTGKPGGGLFSRILPAFGIGWCFGFGY FVAGLWWLGNALLLEADEFAWALPLAILGLPALLALFYGFAVAAANLLWSDGLGRIAALAAAFGVSEWLRSFLATGFPWN AIGYGIMPIPIMMQSAHLLGLLSITTLAVFIFASPALIGTKKGMGPGLALAGLLLAAHFGYGFYRLQTPAETPADALTVR IVQPAIDQSRKMLNTDRAEIFAEHLRLSALPPGEGKKRPDIIVWPETSVPFILTQNPDALAEIASTLEDGQVLFTGAVRM EDQGAGRPPRYYNSVYAIDSQGEIIGATDKVHLTPFGEYVPFEGILREFGIDNVIALPGGFSAASSRTPLTLPSGKTFYP LICYEIIFPGEMTPGLQGAAAILNVTNDGWFGDTPGPYQHFLQARVRAVETGVPVIRGANTGISAVIDPYGRIIAGLDYG RVGILDATLSGGSNDAFTYDTHRTYFWLIFSILMIVAVFPALSFARRQN
Specific function: Transfers the fatty acyl group on membrane lipoproteins
COG id: COG0815
COG function: function code M; Apolipoprotein N-acyltransferase
Gene ontology:
Cell location: Cell inner membrane; Multi-pass membrane protein
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Contains 1 CN hydrolase domain
Homologues:
Organism=Escherichia coli, GI1786878, Length=524, Percent_Identity=28.6259541984733, Blast_Score=155, Evalue=9e-39,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): LNT_AGRT5 (Q8UID7)
Other databases:
- EMBL: AE007869 - PIR: AH2620 - PIR: H97402 - RefSeq: NP_353392.1 - ProteinModelPortal: Q8UID7 - STRING: Q8UID7 - GeneID: 1132398 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0360 - eggNOG: COG0815 - HOGENOM: HBG616234 - OMA: MPPGRRI - PhylomeDB: Q8UID7 - ProtClustDB: PRK00302 - BioCyc: ATUM176299-1:ATU0360-MONOMER - HAMAP: MF_01148 - InterPro: IPR004563 - InterPro: IPR003010 - Gene3D: G3DSA:3.60.110.10 - TIGRFAMs: TIGR00546
Pfam domain/function: PF00795 CN_hydrolase; SSF56317 Ntlse/CNhydtse
EC number: 2.3.1.- [C]
Molecular weight: Translated: 56501; Mature: 56501
Theoretical pI: Translated: 5.69; Mature: 5.69
Prosite motif: PS50263 CN_HYDROLASE
Important sites: NA
Signals:
None
Transmembrane regions:
HASH(0xcdc5e38)-; HASH(0xc48ce90)-; HASH(0x404e4ca4)-; HASH(0x4051480c)-; HASH(0xb2e8ffc)-; HASH(0xc787f5c)-;
Cys/Met content:
0.6 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 2.8 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MERLAGRVMLAGGMSRAVMAIAAGAVGALALPPFGFFAALFFSFTLLVWLVDGCTGKPGG CCCHHCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC GLFSRILPAFGIGWCFGFGYFVAGLWWLGNALLLEADEFAWALPLAILGLPALLALFYGF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH AVAAANLLWSDGLGRIAALAAAFGVSEWLRSFLATGFPWNAIGYGIMPIPIMMQSAHLLG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHH LLSITTLAVFIFASPALIGTKKGMGPGLALAGLLLAAHFGYGFYRLQTPAETPADALTVR HHHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHEEEE IVQPAIDQSRKMLNTDRAEIFAEHLRLSALPPGEGKKRPDIIVWPETSVPFILTQNPDAL EEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEECCCHHH AEIASTLEDGQVLFTGAVRMEDQGAGRPPRYYNSVYAIDSQGEIIGATDKVHLTPFGEYV HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCCCCC PFEGILREFGIDNVIALPGGFSAASSRTPLTLPSGKTFYPLICYEIIFPGEMTPGLQGAA CHHHHHHHCCCCCEEECCCCCCCCCCCCCEECCCCCCCHHEEEEEEEECCCCCCCCCCCE AILNVTNDGWFGDTPGPYQHFLQARVRAVETGVPVIRGANTGISAVIDPYGRIIAGLDYG EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCHHHHHCCCCCC RVGILDATLSGGSNDAFTYDTHRTYFWLIFSILMIVAVFPALSFARRQN CEEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCH >Mature Secondary Structure MERLAGRVMLAGGMSRAVMAIAAGAVGALALPPFGFFAALFFSFTLLVWLVDGCTGKPGG CCCHHCCEEEECCHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCCCCCC GLFSRILPAFGIGWCFGFGYFVAGLWWLGNALLLEADEFAWALPLAILGLPALLALFYGF HHHHHHHHHHHHHHHHHHHHHHHHHHHCCCEEEEECHHHHHHHHHHHHHHHHHHHHHHHH AVAAANLLWSDGLGRIAALAAAFGVSEWLRSFLATGFPWNAIGYGIMPIPIMMQSAHLLG HHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHCCCCCCHHHHHHHHHHHH LLSITTLAVFIFASPALIGTKKGMGPGLALAGLLLAAHFGYGFYRLQTPAETPADALTVR HHHHHHHHHHHHHCCHHEECCCCCCCHHHHHHHHHHHHHCCCEEEECCCCCCCCHHEEEE IVQPAIDQSRKMLNTDRAEIFAEHLRLSALPPGEGKKRPDIIVWPETSVPFILTQNPDAL EEHHHHHHHHHHHCCHHHHHHHHHHHHCCCCCCCCCCCCCEEEECCCCCCEEEECCCHHH AEIASTLEDGQVLFTGAVRMEDQGAGRPPRYYNSVYAIDSQGEIIGATDKVHLTPFGEYV HHHHHHHCCCCEEEEEEEEECCCCCCCCCCCCCCEEEECCCCCEEECCCEEEECCCCCCC PFEGILREFGIDNVIALPGGFSAASSRTPLTLPSGKTFYPLICYEIIFPGEMTPGLQGAA CHHHHHHHCCCCCEEECCCCCCCCCCCCCEECCCCCCCHHEEEEEEEECCCCCCCCCCCE AILNVTNDGWFGDTPGPYQHFLQARVRAVETGVPVIRGANTGISAVIDPYGRIIAGLDYG EEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCEEECCCCCHHHHHCCHHHHHCCCCCC RVGILDATLSGGSNDAFTYDTHRTYFWLIFSILMIVAVFPALSFARRQN CEEEEEEEECCCCCCCEEECCCHHHHHHHHHHHHHHHHHHHHHHHHCCH
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: Transferases; Acyltransferases; Transferring groups other than amino-acyl groups [C]
Inhibitor: NA
Structure determination priority: 6.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194