Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is 15887667
Identifier: 15887667
GI number: 15887667
Start: 310312
End: 310686
Strand: Direct
Name: 15887667
Synonym: Atu0317
Alternate gene names: NA
Gene position: 310312-310686 (Clockwise)
Preceding gene: 159184253
Following gene: 159184256
Centisome position: 10.92
GC content: 56.0
Gene sequence:
>375_bases ATGACCCTCTTTGATCGCAAGACATTCGACAGGGTGCTTGGCGAATGGCCGGGCGTGCGTTTCGTCGATCAATGGGATTC ACATGTGGCCAAGGTGGGCGACAAGGTCTTTGCGGTGCTGGGCGAACGGGAAGACTGGCGGCTGGTGGTGAAATGCTCGG AAGAGAGTTTTGAAATCCTCACCTCGCTTGAGGGCATCGCTCAGGCACCATATTTCGCCAAACGCAAATGGATATCGATT GGCGATCATTCCCCGCTCGAACAGGAAGAACTGGAGCACTATGTGCGCCGCTCCTATGAGCTTGTCGCAGCCGGCCTGAC AAAAAAACTGCGGGGCGAACTGGGCATCGTGATCGATAACGCGCCCCGCCTATAA
Upstream 100 bases:
>100_bases GCGTGAAGATCATTTCGGCCGATGGTGTCGAGGCCTGGCCGGATCTCGACAAGGCGGAAGTCGCAAAACGTCTGGCAGCC CTTATCGCGGAGAAACTCGC
Downstream 100 bases:
>100_bases TTTGCCGTCAGCTTACCTTCTTGTCCTTACCGATGATCTGGCGGACGCCTTCTTTGGTGAAGGGCTGCAACAGTTGCGGC ACAAACCCCTTGGCGATCTC
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 124; Mature: 123
Protein sequence:
>124_residues MTLFDRKTFDRVLGEWPGVRFVDQWDSHVAKVGDKVFAVLGEREDWRLVVKCSEESFEILTSLEGIAQAPYFAKRKWISI GDHSPLEQEELEHYVRRSYELVAAGLTKKLRGELGIVIDNAPRL
Sequences:
>Translated_124_residues MTLFDRKTFDRVLGEWPGVRFVDQWDSHVAKVGDKVFAVLGEREDWRLVVKCSEESFEILTSLEGIAQAPYFAKRKWISI GDHSPLEQEELEHYVRRSYELVAAGLTKKLRGELGIVIDNAPRL >Mature_123_residues TLFDRKTFDRVLGEWPGVRFVDQWDSHVAKVGDKVFAVLGEREDWRLVVKCSEESFEILTSLEGIAQAPYFAKRKWISIG DHSPLEQEELEHYVRRSYELVAAGLTKKLRGELGIVIDNAPRL
Specific function: Unknown
COG id: COG2315
COG function: function code S; Uncharacterized protein conserved in bacteria
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 14290; Mature: 14159
Theoretical pI: Translated: 5.72; Mature: 5.72
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.8 %Cys (Translated Protein) 0.8 %Met (Translated Protein) 1.6 %Cys+Met (Translated Protein) 0.8 %Cys (Mature Protein) 0.0 %Met (Mature Protein) 0.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MTLFDRKTFDRVLGEWPGVRFVDQWDSHVAKVGDKVFAVLGEREDWRLVVKCSEESFEIL CCCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH TSLEGIAQAPYFAKRKWISIGDHSPLEQEELEHYVRRSYELVAAGLTKKLRGELGIVIDN HHHHHHHHCCHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC APRL CCCC >Mature Secondary Structure TLFDRKTFDRVLGEWPGVRFVDQWDSHVAKVGDKVFAVLGEREDWRLVVKCSEESFEIL CCCCHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCCEEEEEECCHHHHHH TSLEGIAQAPYFAKRKWISIGDHSPLEQEELEHYVRRSYELVAAGLTKKLRGELGIVIDN HHHHHHHHCCHHHHHCEEECCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCEEECC APRL CCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA