Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
---|---|
Accession | NC_003062 |
Length | 2,841,580 |
Click here to switch to the map view.
The map label for this gene is nodL [H]
Identifier: 15887653
GI number: 15887653
Start: 296456
End: 297016
Strand: Direct
Name: nodL [H]
Synonym: Atu0304
Alternate gene names: 15887653
Gene position: 296456-297016 (Clockwise)
Preceding gene: 15887652
Following gene: 15887654
Centisome position: 10.43
GC content: 61.5
Gene sequence:
>561_bases ATGTCCACTGAGCGGGAAAAGATGGCCGCGGGCGAATGGTACAGCTGCATGGGTGCCGAACTGGATATGCTGCGCTGGCA TTCACGCCGGGCGGTTCACCAGCACAATACCATGCCGCCGGATGAGCGCGGCACCATCGGGCCGCTGCTGCGCGCACTTT TTGCCTCCGTGGGCGAAGGTGCATTCATCGAGGCGCCTTTTCATTGCGCCTACGGTTTCAACATTACGCTCGGCAGGAAT GCCTATCTCAATGCCGGCTGCACCATTCTCGATTCTGCGAAGGTCGCGATAGGCGACGGCGCGATGCTCGGCCCCGCCGT GCAGATCTATTGTGCGGAACACCATCTTGATCCGGTTCCGCGCGCGCAGGGGATTGAGATTGCAAAGCCTGTCACGATCG GCCGTGATGTCTGGATCGGCGGCGGAGCGATCATTCTGGCCGGTATCACCATCGGTGACGGTGCAATTGTCGGTGCCGGC TCGGTGGTGACGCGCAATGTGCCGGCGCGTGCAACGGTCGTGGGAAATCCCGCCCGACCCATAAATCGTATAGCCGGCTG A
Upstream 100 bases:
>100_bases GATGCCGGCCGTTTTTCGCTGCGCTTCGATATTGTCGCCGTTCTGCCACGACGCCTGCCGCAGCACTTTATCGACGCATT TTAAAGGGGAGGGGAAGGCA
Downstream 100 bases:
>100_bases GATTGTCGGCACGTGGTGTAATAAATCTGACACGGAACTGTCAAAGAGGCGTCATCGAACCGCTCTATTCGCATCCTCAC CCCAATAAATGGTGGAGAGG
Product: nodulation protein L
Products: CoA; acetylmaltose [C]
Alternate protein names: NA
Number of amino acids: Translated: 186; Mature: 185
Protein sequence:
>186_residues MSTEREKMAAGEWYSCMGAELDMLRWHSRRAVHQHNTMPPDERGTIGPLLRALFASVGEGAFIEAPFHCAYGFNITLGRN AYLNAGCTILDSAKVAIGDGAMLGPAVQIYCAEHHLDPVPRAQGIEIAKPVTIGRDVWIGGGAIILAGITIGDGAIVGAG SVVTRNVPARATVVGNPARPINRIAG
Sequences:
>Translated_186_residues MSTEREKMAAGEWYSCMGAELDMLRWHSRRAVHQHNTMPPDERGTIGPLLRALFASVGEGAFIEAPFHCAYGFNITLGRN AYLNAGCTILDSAKVAIGDGAMLGPAVQIYCAEHHLDPVPRAQGIEIAKPVTIGRDVWIGGGAIILAGITIGDGAIVGAG SVVTRNVPARATVVGNPARPINRIAG >Mature_185_residues STEREKMAAGEWYSCMGAELDMLRWHSRRAVHQHNTMPPDERGTIGPLLRALFASVGEGAFIEAPFHCAYGFNITLGRNA YLNAGCTILDSAKVAIGDGAMLGPAVQIYCAEHHLDPVPRAQGIEIAKPVTIGRDVWIGGGAIILAGITIGDGAIVGAGS VVTRNVPARATVVGNPARPINRIAG
Specific function: Acetyltransferase implicated in the O-acetylation of Nod factors [H]
COG id: COG0110
COG function: function code R; Acetyltransferase (isoleucine patch superfamily)
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Unknown [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the transferase hexapeptide repeat family [H]
Homologues:
Organism=Escherichia coli, GI1786664, Length=184, Percent_Identity=47.2826086956522, Blast_Score=170, Evalue=4e-44, Organism=Escherichia coli, GI1786537, Length=179, Percent_Identity=36.3128491620112, Blast_Score=128, Evalue=3e-31, Organism=Escherichia coli, GI1788367, Length=130, Percent_Identity=29.2307692307692, Blast_Score=62, Evalue=3e-11, Organism=Saccharomyces cerevisiae, GI6322243, Length=181, Percent_Identity=40.8839779005525, Blast_Score=149, Evalue=3e-37,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR001451 - InterPro: IPR018357 - InterPro: IPR011004 [H]
Pfam domain/function: PF00132 Hexapep [H]
EC number: 2.3.1.79 [C]
Molecular weight: Translated: 19582; Mature: 19451
Theoretical pI: Translated: 7.55; Mature: 7.55
Prosite motif: PS00101 HEXAPEP_TRANSFERASES
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.2 %Cys (Translated Protein) 3.2 %Met (Translated Protein) 5.4 %Cys+Met (Translated Protein) 2.2 %Cys (Mature Protein) 2.7 %Met (Mature Protein) 4.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEREKMAAGEWYSCMGAELDMLRWHSRRAVHQHNTMPPDERGTIGPLLRALFASVGEG CCCCHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC AFIEAPFHCAYGFNITLGRNAYLNAGCTILDSAKVAIGDGAMLGPAVQIYCAEHHLDPVP EEEECCEEEEECCEEEECCCCEECCCEEEECCCEEEECCCCEECCEEEEEEECCCCCCCC RAQGIEIAKPVTIGRDVWIGGGAIILAGITIGDGAIVGAGSVVTRNVPARATVVGNPARP CCCCCEECCCEEECCEEEECCCEEEEEEEEECCCCEEECCCEEECCCCCEEEEECCCCCH INRIAG HHHHCC >Mature Secondary Structure STEREKMAAGEWYSCMGAELDMLRWHSRRAVHQHNTMPPDERGTIGPLLRALFASVGEG CCCHHHHHCCCCHHHCCCCHHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHHCCCC AFIEAPFHCAYGFNITLGRNAYLNAGCTILDSAKVAIGDGAMLGPAVQIYCAEHHLDPVP EEEECCEEEEECCEEEECCCCEECCCEEEECCCEEEECCCCEECCEEEEEEECCCCCCCC RAQGIEIAKPVTIGRDVWIGGGAIILAGITIGDGAIVGAGSVVTRNVPARATVVGNPARP CCCCCEECCCEEECCEEEECCCEEEEEEEEECCCCEEECCCEEECCCCCEEEEECCCCCH INRIAG HHHHCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: 0.20 {glucose} 0.11 {maltose}
Km value (mM): 0.018 {acetyl-CoA}} 62 {glucose}} 90 {maltose}} 40 {triethanolamine}} [C]
Substrates: Acetyl-CoA; maltose [C]
Specific reaction: Acetyl-CoA + maltose = CoA + acetylmaltose [C]
General reaction: Acyl group transfer [C]
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 1558960; 8801423; 11481432 [H]