Definition Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence.
Accession NC_003062
Length 2,841,580

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The map label for this gene is 15887634

Identifier: 15887634

GI number: 15887634

Start: 278400

End: 279494

Strand: Reverse

Name: 15887634

Synonym: Atu0285

Alternate gene names: NA

Gene position: 279494-278400 (Counterclockwise)

Preceding gene: 15887635

Following gene: 15887633

Centisome position: 9.84

GC content: 62.74

Gene sequence:

>1095_bases
ATGATCTCCGGCAGCAAGCGGATGCTGATCGACCGGCGCAGCTTCATCAAGGCGGCGGGTATTCCCTTTCTTGCCGCCCT
CGCCCCGCGGTCGCTCCATGCGCTGGAACGCACAGACGCCGTCTTCGCCTCCGCCTTCCGCGCCCGTGATGGATCCTACG
GCATTGCGACGGTAAGCGAGCGCGGCGAAATCATCGACCGCGTTGCGCTTCCCGCCCGCGCCCATGGAATGGCGACGAGC
CATGCGACCGGTAGGACCGTGGCCTTCGCGCGCCGTCCCGGCACTTTCTTCATGGCTTTCGATCCCGTGCAACGTCAGGA
GCCTGTCGTGATGCACGCGCCGGAGAACCGGCACTTTTATGGCCACGGGCAATTTTCACCCGATGGCGCAATTCTCTATG
CCAGCGAAAACGACTTCGACGGTAACCGCGGCGTCATCGGCCTTTACGACGCCCGCAACGGCTTTGCCCGCATCGGTGAA
TATGACGCGCATGGTGTCGGCACCCATGACATGACGGTCAGCGATGACGGACGGCTGATCGTGATCGCCAATGGCGGCAT
CGAGACCCACCCGGATTTCGGCCGAACAAAGCTCAATATCGACAGCATGGAACCGTCACTCGTGCTTCTGGACGCCGCCA
CCGGCCAGCTGATCCAGAAACATGTAATGCCGGAGCAGCTGCGGCAGCTTTCCACCCGCCACGTCGATCTCGGCGATAAC
GGCCGCATCTGGTTCGCCTGCCAATATGAAGGACCGCGCAACAATCTTCCGCCGCTTGTCGGCCATTTCTCGAAGGGTGA
GGATGTAGCCTTTGTCGATCTGCCGGAGGAAACGACGGTGCGGCTTGCCAATTATGTCGGGGCCATCGCCGTCAACCGGC
GCGAAGGGCTGGTGGGTCTGACCTCGCCGAGCGGCAACGCCGCCGTGACGCTCGATGCAAAGACGGGCAGTGTGGTCTCC
GAGGTCACCGTGCGGGAGGCGGCGGGCGTTGCGACGGCTGCAGGCGGCATTGCGGTTTCCTCTTATGACGGATTTTTCGA
GGCTATTCGCAGCGACGTGGCCTGGGACCAGCATATCGTACGCCTGTCCGGCTAA

Upstream 100 bases:

>100_bases
GTTGCTCAACGGCAAAGACCTGATCTACCGCCTCAACGACCAATATGGCGGCGCCATCGGCCTCAGCTCCGGCTTTTCCT
TTGCTGACGGAGACTAAACG

Downstream 100 bases:

>100_bases
AATACTGAAAAGGCAGGGAACAAAAGCATGGCCAGCGCATTTGAGGCGTCATGAAGAACCTTGCCGTGTATATTATTTTT
GTGGTTGTTGTTGTTGCCAT

Product: hypothetical protein

Products: NA

Alternate protein names: Secreted Protein; Lipoprotein; Tat Pathway Signal Sequence Domain-Containing Protein

Number of amino acids: Translated: 364; Mature: 364

Protein sequence:

>364_residues
MISGSKRMLIDRRSFIKAAGIPFLAALAPRSLHALERTDAVFASAFRARDGSYGIATVSERGEIIDRVALPARAHGMATS
HATGRTVAFARRPGTFFMAFDPVQRQEPVVMHAPENRHFYGHGQFSPDGAILYASENDFDGNRGVIGLYDARNGFARIGE
YDAHGVGTHDMTVSDDGRLIVIANGGIETHPDFGRTKLNIDSMEPSLVLLDAATGQLIQKHVMPEQLRQLSTRHVDLGDN
GRIWFACQYEGPRNNLPPLVGHFSKGEDVAFVDLPEETTVRLANYVGAIAVNRREGLVGLTSPSGNAAVTLDAKTGSVVS
EVTVREAAGVATAAGGIAVSSYDGFFEAIRSDVAWDQHIVRLSG

Sequences:

>Translated_364_residues
MISGSKRMLIDRRSFIKAAGIPFLAALAPRSLHALERTDAVFASAFRARDGSYGIATVSERGEIIDRVALPARAHGMATS
HATGRTVAFARRPGTFFMAFDPVQRQEPVVMHAPENRHFYGHGQFSPDGAILYASENDFDGNRGVIGLYDARNGFARIGE
YDAHGVGTHDMTVSDDGRLIVIANGGIETHPDFGRTKLNIDSMEPSLVLLDAATGQLIQKHVMPEQLRQLSTRHVDLGDN
GRIWFACQYEGPRNNLPPLVGHFSKGEDVAFVDLPEETTVRLANYVGAIAVNRREGLVGLTSPSGNAAVTLDAKTGSVVS
EVTVREAAGVATAAGGIAVSSYDGFFEAIRSDVAWDQHIVRLSG
>Mature_364_residues
MISGSKRMLIDRRSFIKAAGIPFLAALAPRSLHALERTDAVFASAFRARDGSYGIATVSERGEIIDRVALPARAHGMATS
HATGRTVAFARRPGTFFMAFDPVQRQEPVVMHAPENRHFYGHGQFSPDGAILYASENDFDGNRGVIGLYDARNGFARIGE
YDAHGVGTHDMTVSDDGRLIVIANGGIETHPDFGRTKLNIDSMEPSLVLLDAATGQLIQKHVMPEQLRQLSTRHVDLGDN
GRIWFACQYEGPRNNLPPLVGHFSKGEDVAFVDLPEETTVRLANYVGAIAVNRREGLVGLTSPSGNAAVTLDAKTGSVVS
EVTVREAAGVATAAGGIAVSSYDGFFEAIRSDVAWDQHIVRLSG

Specific function: Unknown

COG id: COG3490

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 39184; Mature: 39184

Theoretical pI: Translated: 6.58; Mature: 6.58

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.3 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.5 %Cys+Met (Translated Protein)
0.3 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MISGSKRMLIDRRSFIKAAGIPFLAALAPRSLHALERTDAVFASAFRARDGSYGIATVSE
CCCCCCEEEEEHHHHHHHCCCCCEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
RGEIIDRVALPARAHGMATSHATGRTVAFARRPGTFFMAFDPVQRQEPVVMHAPENRHFY
CCHHHHHHCCCCHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCEEE
GHGQFSPDGAILYASENDFDGNRGVIGLYDARNGFARIGEYDAHGVGTHDMTVSDDGRLI
ECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCEEECCCCCEE
VIANGGIETHPDFGRTKLNIDSMEPSLVLLDAATGQLIQKHVMPEQLRQLSTRHVDLGDN
EEECCCCCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHCEECCCCC
GRIWFACQYEGPRNNLPPLVGHFSKGEDVAFVDLPEETTVRLANYVGAIAVNRREGLVGL
CCEEEEEEECCCCCCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHEEEEEECCCCEEEE
TSPSGNAAVTLDAKTGSVVSEVTVREAAGVATAAGGIAVSSYDGFFEAIRSDVAWDQHIV
ECCCCCEEEEEECCCCCHHHHHHHHHHCCCEEECCCEEEECCHHHHHHHHHCCCCCEEEE
RLSG
EECC
>Mature Secondary Structure
MISGSKRMLIDRRSFIKAAGIPFLAALAPRSLHALERTDAVFASAFRARDGSYGIATVSE
CCCCCCEEEEEHHHHHHHCCCCCEEHHCCHHHHHHHHHHHHHHHHHHCCCCCCEEEEECC
RGEIIDRVALPARAHGMATSHATGRTVAFARRPGTFFMAFDPVQRQEPVVMHAPENRHFY
CCHHHHHHCCCCHHCCCCCCCCCCCEEEEEECCCEEEEEECCCCCCCCEEEECCCCCEEE
GHGQFSPDGAILYASENDFDGNRGVIGLYDARNGFARIGEYDAHGVGTHDMTVSDDGRLI
ECCCCCCCCEEEEEECCCCCCCCCEEEEEECCCCHHHCCCCCCCCCCCCCEEECCCCCEE
VIANGGIETHPDFGRTKLNIDSMEPSLVLLDAATGQLIQKHVMPEQLRQLSTRHVDLGDN
EEECCCCCCCCCCCCEEEEECCCCCCEEEEECCHHHHHHHHCCHHHHHHHHHCEECCCCC
GRIWFACQYEGPRNNLPPLVGHFSKGEDVAFVDLPEETTVRLANYVGAIAVNRREGLVGL
CCEEEEEEECCCCCCCCHHHCCCCCCCCEEEEECCCHHHHHHHHHHEEEEEECCCCEEEE
TSPSGNAAVTLDAKTGSVVSEVTVREAAGVATAAGGIAVSSYDGFFEAIRSDVAWDQHIV
ECCCCCEEEEEECCCCCHHHHHHHHHHCCCEEECCCEEEECCHHHHHHHHHCCCCCEEEE
RLSG
EECC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA