Definition | Agrobacterium tumefaciens str. C58 chromosome circular, complete sequence. |
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Accession | NC_003062 |
Length | 2,841,580 |
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The map label for this gene is yegP [C]
Identifier: 15887582
GI number: 15887582
Start: 232853
End: 233041
Strand: Direct
Name: yegP [C]
Synonym: Atu0232
Alternate gene names: 15887582
Gene position: 232853-233041 (Clockwise)
Preceding gene: 159184223
Following gene: 159184224
Centisome position: 8.19
GC content: 50.79
Gene sequence:
>189_bases ATGTATAAATTCGAAATCTATCAGGACAAAGCCGGCGAATATCGCTTCCGCTTCAAGGCATCCAATGGCGAGACGATGTT TTCGTCGGAAGGGTACAAGGCAAAGGCATCGGCTATCCACGCGATCGAATCGATCAAGAGAAACTCTGCCGGTGCCGATA CCGTCGATCTCACCACAATGACGGCCTGA
Upstream 100 bases:
>100_bases TCGGCTGATCTGACAGCGGTGATTTTCGGTTGCGAATTGAACAGGTTCTGCTCAAGATTGCGACGGGTTCACTTCGATTT GCAACAGAGGCGCAAAGATC
Downstream 100 bases:
>100_bases GCGCCGCCCTTGCGCGAGAACTCGAAGCGTTTCGCCTGTCATAAATGACGGGCGCATCGACAGGTGCCGGCGTAAAGATA AGATTCAGTCTTTTTTGATA
Product: hypothetical protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 62; Mature: 62
Protein sequence:
>62_residues MYKFEIYQDKAGEYRFRFKASNGETMFSSEGYKAKASAIHAIESIKRNSAGADTVDLTTMTA
Sequences:
>Translated_62_residues MYKFEIYQDKAGEYRFRFKASNGETMFSSEGYKAKASAIHAIESIKRNSAGADTVDLTTMTA >Mature_62_residues MYKFEIYQDKAGEYRFRFKASNGETMFSSEGYKAKASAIHAIESIKRNSAGADTVDLTTMTA
Specific function: Unknown
COG id: COG3422
COG function: function code S; Uncharacterized conserved protein
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the UPF0339 family
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): Y232_AGRT5 (Q8UIR1)
Other databases:
- EMBL: AE007869 - PIR: AH2604 - PIR: G97386 - RefSeq: NP_353263.1 - PDB: 2K7I - PDBsum: 2K7I - ProteinModelPortal: Q8UIR1 - SMR: Q8UIR1 - STRING: Q8UIR1 - GeneID: 1132270 - GenomeReviews: AE007869_GR - KEGG: atu:Atu0232 - eggNOG: COG3422 - HOGENOM: HBG451093 - OMA: FRFRFKA - ProtClustDB: CLSK557427 - BioCyc: ATUM176299-1:ATU0232-MONOMER - InterPro: IPR010879
Pfam domain/function: PF07411 DUF1508
EC number: NA
Molecular weight: Translated: 6936; Mature: 6936
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 4.8 %Met (Translated Protein) 4.8 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 4.8 %Met (Mature Protein) 4.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MYKFEIYQDKAGEYRFRFKASNGETMFSSEGYKAKASAIHAIESIKRNSAGADTVDLTTM CCEEEEEECCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE TA CC >Mature Secondary Structure MYKFEIYQDKAGEYRFRFKASNGETMFSSEGYKAKASAIHAIESIKRNSAGADTVDLTTM CCEEEEEECCCCCEEEEEECCCCCEEECCCCCCCHHHHHHHHHHHHCCCCCCCEEEEEEE TA CC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: 11743193; 11743194