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The map label for this gene is ctpC

Identifier: 15887574

GI number: 15887574

Start: 228073

End: 228879

Strand: Reverse

Name: ctpC

Synonym: Atu0222

Alternate gene names: NA

Gene position: 228879-228073 (Counterclockwise)

Preceding gene: 15887575

Following gene: 15887573

Centisome position: 8.05

GC content: 58.86

Gene sequence:

>807_bases
ATGAAACCGTCGCGTATCGTCATTCTTTCCGTTGCCCTGGTGGCCGCCGGTCTTGCCGGCCTTGTCGCCATGCAGATTTC
CGGCGCGAAGCAGGTTATCGAAAAAGCGGAAACGATTATCCAGAAAGAACCGACGGTCAACGTTCTCATCTCTTCCGTCA
ATCTGCCCGTCGGCAGCCGTCTGAACGACAGCTCCATGCGCTGGACACCCTGGCCACAGGGCAATGTGGTCGACAGTTTC
ATAACGCAAGCGAAAAGGCCCGACGCCATCACCGAGCTCGCGGGCACGGTCGTGCGGTTGCCCCTGTTCGAAGGTGAGCC
GATCCGGCCGGAAAAAGTGGTCGATTCCAGCACCCGCATCATGTCTTCGCTTTTGCCCGCCGGCAAACGCGCCGTCGCTA
CCGAGATTTCCGTCTCGACCGGTGCGGGTGGCTTCGTACTGCCGAACGACCGGGTTGATGTCATCATGGTCCGCAAGGGC
GAGAATGGTAACTTCCTGACCGAAAATGTTTTGAACAACGTCCGTGTTCTGGCGATCGACCAGCAGATCAAGGAAGGCGA
AGACGGCATAGCGGCCGTGGTCGGCGCTACCGCGACGCTCGAACTGACCCCCGAACAGGCAAAGATCATAACCGTGGCGC
AACAGATGGCGGACCGTCTCACGCTCGCCTTGCGTTCAGTCGCAGATGCGCAGGAAAACGATACGCTTTCGGCCGGCCAT
CTTCTCAGCGGAAGTTCCGGCCAGCCGGAAATTCAGGTGATCAAATCCGGCTCGATCGTGAAGAGCGGTCAAGGAGCCTC
ACAATGA

Upstream 100 bases:

>100_bases
AAGTTTGTTAACCACATACTTCAGGACAATATTAACCATAAATATACCAATCAAGCGCCATCCTAAGGGAAGAAGAATCT
GATTCCCTCAAGGATCGAGC

Downstream 100 bases:

>100_bases
CCGGGGGGCTCATGACAAAACGTTTCAAACACCATCTGCGCTCGTCGATGGCAGGCGGGCTTGCATTCTGCCTGACTTTT
TCAGGCGTTCCCGGCCGGCA

Product: components of type IV pilus

Products: NA

Alternate protein names: Flp Pilus Assembly CpaB; Pilus Assembly Protein CpaB; SAF Domain-Containing Protein; Pilus Assembly Protein; Pilus Assembly Transmembrane Protein; CtpC Protein; Flp Pilus Assembly Protein Cpab; Flp Pilus Assembly Protein; Pilus Assembly-Related Exported Protein; CpaB2 Pilus Assembly Protein; CpaB2 Flp Pilus Assembly Protein CpaB; Component Of Type IV Pilus; Flp Pilus Assembly Protein CpaB-Like Protein; Components Of Type IV Pilus

Number of amino acids: Translated: 268; Mature: 268

Protein sequence:

>268_residues
MKPSRIVILSVALVAAGLAGLVAMQISGAKQVIEKAETIIQKEPTVNVLISSVNLPVGSRLNDSSMRWTPWPQGNVVDSF
ITQAKRPDAITELAGTVVRLPLFEGEPIRPEKVVDSSTRIMSSLLPAGKRAVATEISVSTGAGGFVLPNDRVDVIMVRKG
ENGNFLTENVLNNVRVLAIDQQIKEGEDGIAAVVGATATLELTPEQAKIITVAQQMADRLTLALRSVADAQENDTLSAGH
LLSGSSGQPEIQVIKSGSIVKSGQGASQ

Sequences:

>Translated_268_residues
MKPSRIVILSVALVAAGLAGLVAMQISGAKQVIEKAETIIQKEPTVNVLISSVNLPVGSRLNDSSMRWTPWPQGNVVDSF
ITQAKRPDAITELAGTVVRLPLFEGEPIRPEKVVDSSTRIMSSLLPAGKRAVATEISVSTGAGGFVLPNDRVDVIMVRKG
ENGNFLTENVLNNVRVLAIDQQIKEGEDGIAAVVGATATLELTPEQAKIITVAQQMADRLTLALRSVADAQENDTLSAGH
LLSGSSGQPEIQVIKSGSIVKSGQGASQ
>Mature_268_residues
MKPSRIVILSVALVAAGLAGLVAMQISGAKQVIEKAETIIQKEPTVNVLISSVNLPVGSRLNDSSMRWTPWPQGNVVDSF
ITQAKRPDAITELAGTVVRLPLFEGEPIRPEKVVDSSTRIMSSLLPAGKRAVATEISVSTGAGGFVLPNDRVDVIMVRKG
ENGNFLTENVLNNVRVLAIDQQIKEGEDGIAAVVGATATLELTPEQAKIITVAQQMADRLTLALRSVADAQENDTLSAGH
LLSGSSGQPEIQVIKSGSIVKSGQGASQ

Specific function: Unknown

COG id: COG3745

COG function: function code U; Flp pilus assembly protein CpaB

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 28192; Mature: 28192

Theoretical pI: Translated: 5.42; Mature: 5.42

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.2 %Met     (Translated Protein)
2.2 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.2 %Met     (Mature Protein)
2.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKPSRIVILSVALVAAGLAGLVAMQISGAKQVIEKAETIIQKEPTVNVLISSVNLPVGSR
CCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
LNDSSMRWTPWPQGNVVDSFITQAKRPDAITELAGTVVRLPLFEGEPIRPEKVVDSSTRI
CCCCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHCHHHHH
MSSLLPAGKRAVATEISVSTGAGGFVLPNDRVDVIMVRKGENGNFLTENVLNNVRVLAID
HHHHCCCCCCEEEEEEEEECCCCCEECCCCCEEEEEEEECCCCCEEHHHHHCCEEEEEEC
QQIKEGEDGIAAVVGATATLELTPEQAKIITVAQQMADRLTLALRSVADAQENDTLSAGH
CHHHCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LLSGSSGQPEIQVIKSGSIVKSGQGASQ
EECCCCCCCEEEEEECCCEEECCCCCCC
>Mature Secondary Structure
MKPSRIVILSVALVAAGLAGLVAMQISGAKQVIEKAETIIQKEPTVNVLISSVNLPVGSR
CCCCEEEEHHHHHHHHHHHHHHHHHHCCHHHHHHHHHHHHHCCCCEEEEEEECCCCCCCC
LNDSSMRWTPWPQGNVVDSFITQAKRPDAITELAGTVVRLPLFEGEPIRPEKVVDSSTRI
CCCCCCEECCCCCCCHHHHHHHHCCCCHHHHHHHHHEEEEECCCCCCCCHHHHHCHHHHH
MSSLLPAGKRAVATEISVSTGAGGFVLPNDRVDVIMVRKGENGNFLTENVLNNVRVLAID
HHHHCCCCCCEEEEEEEEECCCCCEECCCCCEEEEEEEECCCCCEEHHHHHCCEEEEEEC
QQIKEGEDGIAAVVGATATLELTPEQAKIITVAQQMADRLTLALRSVADAQENDTLSAGH
CHHHCCCCCEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCC
LLSGSSGQPEIQVIKSGSIVKSGQGASQ
EECCCCCCCEEEEEECCCEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA