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The map label for this gene is cyoC [H]

Identifier: 15887495

GI number: 15887495

Start: 142961

End: 143587

Strand: Reverse

Name: cyoC [H]

Synonym: Atu0140

Alternate gene names: 15887495

Gene position: 143587-142961 (Counterclockwise)

Preceding gene: 15887496

Following gene: 159184177

Centisome position: 5.05

GC content: 56.94

Gene sequence:

>627_bases
ATGGCTCATACACCTGCACAAAGCGTCGACGGCGCTGAACCACCGGTCTTTTACCTGAAGGAAGACCACCACCCGGAAAA
CGGCACTTCGATCGGCTTCTGGCTCTATCTGATGAGCGACTGCCTGATCTTTGCCGTGCTCTTCGCCACCTATGCCGTTC
TCGGCCGCAGCTATGCGGCCGGTCCTTCAGGCGCGGATCTTTTCGATCTCAAGCTCGTGGCTATCAACACCGGCTTCCTG
CTTCTCTCCTCCATCACCTATGGCTTCGCCATGCTGGAAATGGAAAAGCAGAAGGTGAAGTCGACGCTGATCTGGCTCGG
CATCACCGGCCTCTTCGGCCTCGCCTTCCTTGCCGTGGAACTTTACGAGTTTCACCACCTGATCGAAGAAGGTGCCGGCC
CGCAACGTTCGGCCTTCCTTTCGGCTTTCTTCGCTCTGGTCGGCACCCACGGTCTGCACGTCACCTTCGGCACCATCTGG
CTCGTTACGCTGATGGTTCAGGTAGCAAAACACGGCCTGATCGCCGCAAACAAGCGCCGCCTGATGTGCCTTTCAATGTT
CTGGCACTTCCTTGACGTCATCTGGATCGGCGTCTTCTCCTTCGTTTACCTCATGGGAGTTCTTTGA

Upstream 100 bases:

>100_bases
CACCTTCAACTACAATCGCGATTATTACATTCCCGCGTCCGACGTTTCGACCGTCGAGGCGGAGCGTACGAAGCTGCTCG
CGAAACAGGCGTAACGGAAC

Downstream 100 bases:

>100_bases
TGAGTTCCGAAGCACACGCACATCACGACGCGCATGGCGACGACCATCACCATGATGGCGCAAGCCACGGCACGTTCAAA
AGCTACATGATCGGCTTCGT

Product: cytochrome o ubiquinol oxidase subunit III

Products: NA

Alternate protein names: Cytochrome o ubiquinol oxidase subunit III [H]

Number of amino acids: Translated: 208; Mature: 207

Protein sequence:

>208_residues
MAHTPAQSVDGAEPPVFYLKEDHHPENGTSIGFWLYLMSDCLIFAVLFATYAVLGRSYAAGPSGADLFDLKLVAINTGFL
LLSSITYGFAMLEMEKQKVKSTLIWLGITGLFGLAFLAVELYEFHHLIEEGAGPQRSAFLSAFFALVGTHGLHVTFGTIW
LVTLMVQVAKHGLIAANKRRLMCLSMFWHFLDVIWIGVFSFVYLMGVL

Sequences:

>Translated_208_residues
MAHTPAQSVDGAEPPVFYLKEDHHPENGTSIGFWLYLMSDCLIFAVLFATYAVLGRSYAAGPSGADLFDLKLVAINTGFL
LLSSITYGFAMLEMEKQKVKSTLIWLGITGLFGLAFLAVELYEFHHLIEEGAGPQRSAFLSAFFALVGTHGLHVTFGTIW
LVTLMVQVAKHGLIAANKRRLMCLSMFWHFLDVIWIGVFSFVYLMGVL
>Mature_207_residues
AHTPAQSVDGAEPPVFYLKEDHHPENGTSIGFWLYLMSDCLIFAVLFATYAVLGRSYAAGPSGADLFDLKLVAINTGFLL
LSSITYGFAMLEMEKQKVKSTLIWLGITGLFGLAFLAVELYEFHHLIEEGAGPQRSAFLSAFFALVGTHGLHVTFGTIWL
VTLMVQVAKHGLIAANKRRLMCLSMFWHFLDVIWIGVFSFVYLMGVL

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain of E.coli that predominates when cells are grown at high aeration [H]

COG id: COG1845

COG function: function code C; Heme/copper-type cytochrome/quinol oxidase, subunit 3

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 3 family [H]

Homologues:

Organism=Escherichia coli, GI1786633, Length=190, Percent_Identity=58.9473684210526, Blast_Score=235, Evalue=2e-63,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000298
- InterPro:   IPR013833
- InterPro:   IPR014206 [H]

Pfam domain/function: PF00510 COX3 [H]

EC number: 1.10.3.-

Molecular weight: Translated: 23044; Mature: 22913

Theoretical pI: Translated: 6.60; Mature: 6.60

Prosite motif: PS50253 COX3

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.0 %Cys     (Translated Protein)
3.8 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
1.0 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MAHTPAQSVDGAEPPVFYLKEDHHPENGTSIGFWLYLMSDCLIFAVLFATYAVLGRSYAA
CCCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPSGADLFDLKLVAINTGFLLLSSITYGFAMLEMEKQKVKSTLIWLGITGLFGLAFLAVE
CCCCCCHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYEFHHLIEEGAGPQRSAFLSAFFALVGTHGLHVTFGTIWLVTLMVQVAKHGLIAANKRR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCHH
LMCLSMFWHFLDVIWIGVFSFVYLMGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure 
AHTPAQSVDGAEPPVFYLKEDHHPENGTSIGFWLYLMSDCLIFAVLFATYAVLGRSYAA
CCCCCCCCCCCCCCEEEEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GPSGADLFDLKLVAINTGFLLLSSITYGFAMLEMEKQKVKSTLIWLGITGLFGLAFLAVE
CCCCCCHHEEEEEEEHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
LYEFHHLIEEGAGPQRSAFLSAFFALVGTHGLHVTFGTIWLVTLMVQVAKHGLIAANKRR
HHHHHHHHHHCCCCHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCCEECCCHH
LMCLSMFWHFLDVIWIGVFSFVYLMGVL
HHHHHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]