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The map label for this gene is 15887442

Identifier: 15887442

GI number: 15887442

Start: 91594

End: 92295

Strand: Reverse

Name: 15887442

Synonym: Atu0088

Alternate gene names: NA

Gene position: 92295-91594 (Counterclockwise)

Preceding gene: 15887443

Following gene: 15887441

Centisome position: 3.25

GC content: 63.25

Gene sequence:

>702_bases
ATGACATCGCAGGCGCATGAGCCGGACGATCTGCCCGAGACTGACGATGACGGGCGGATCAAGGGCGACGTCAATGGACG
TATGTGCATTGTGACACGGCAGAGCGGATCGCCAGATGAGTTGATCCGCTTCGTCGCAGGCCCGGACGGCAACGTCGTTC
CGGATCTGAAACGCCAATTGCCGGGGCGCGGTTGCTGGGTGACACCCGAGCGCGCCCTGATCGAAAAGGCCATCGCGAAG
AAGCTCTTCGCGCGGGCTCTCAAACGCGACGTCAAGGCCGGGCCGGAGCTTCTCGCTCTTCTCGACCGGCTGATGGCGCA
GCAGCTTGCAGGCATGATGAACATGGCGCGCAAGGCGGGTCAGTTCATCAGCGGCGCAACGAAGGTCGATGCAGCCGTCC
GGTCCGGGAACGCGATCGCCGTGTTCCACGCGACCGATGCTGCGGCCGACGGTGTGAGAAAACTGGACCAGGCCCGCAAG
GCCTGGGCGCTCGGCAGCGATGCCGGCAATGAAATTCCGTCCTTCCGGCTCTCCAGCGAAGCCGAAATGGACGAGTTGAT
GGGCCAGAATGCTTTTATCCATGCCTGCGCGCTTGCAGGGCAGGCGGGTGAGGGTGTAGTGAAGCGCGCAACGATGCTTG
AGCAGTACCGCCTTGGCGGTCGATCTCAGGCGGAACGCGACGCTGCCCGGACAGAACAATGA

Upstream 100 bases:

>100_bases
AGGCCCGTCTTCTGGCAGGCTGGATCACCGCTGAAGAGCTTGCTTCCGAACAGGAAGTCGAGGCGGAAGCTGCCGAGGAG
GCGGATACCGCCGAACAGGA

Downstream 100 bases:

>100_bases
CGCGGTTAACCGACATCAACGGTCGCCGCGTTCCGATGCAGCAATTGAACGACGAGACCTGATGGACGTCATCCGGTTCT
CGTCCGAAGGAACGGGAACG

Product: hypothetical protein

Products: NA

Alternate protein names: None

Number of amino acids: Translated: 233; Mature: 232

Protein sequence:

>233_residues
MTSQAHEPDDLPETDDDGRIKGDVNGRMCIVTRQSGSPDELIRFVAGPDGNVVPDLKRQLPGRGCWVTPERALIEKAIAK
KLFARALKRDVKAGPELLALLDRLMAQQLAGMMNMARKAGQFISGATKVDAAVRSGNAIAVFHATDAAADGVRKLDQARK
AWALGSDAGNEIPSFRLSSEAEMDELMGQNAFIHACALAGQAGEGVVKRATMLEQYRLGGRSQAERDAARTEQ

Sequences:

>Translated_233_residues
MTSQAHEPDDLPETDDDGRIKGDVNGRMCIVTRQSGSPDELIRFVAGPDGNVVPDLKRQLPGRGCWVTPERALIEKAIAK
KLFARALKRDVKAGPELLALLDRLMAQQLAGMMNMARKAGQFISGATKVDAAVRSGNAIAVFHATDAAADGVRKLDQARK
AWALGSDAGNEIPSFRLSSEAEMDELMGQNAFIHACALAGQAGEGVVKRATMLEQYRLGGRSQAERDAARTEQ
>Mature_232_residues
TSQAHEPDDLPETDDDGRIKGDVNGRMCIVTRQSGSPDELIRFVAGPDGNVVPDLKRQLPGRGCWVTPERALIEKAIAKK
LFARALKRDVKAGPELLALLDRLMAQQLAGMMNMARKAGQFISGATKVDAAVRSGNAIAVFHATDAAADGVRKLDQARKA
WALGSDAGNEIPSFRLSSEAEMDELMGQNAFIHACALAGQAGEGVVKRATMLEQYRLGGRSQAERDAARTEQ

Specific function: Unknown

COG id: COG2740

COG function: function code K; Predicted nucleic-acid-binding protein implicated in transcription termination

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 25040; Mature: 24909

Theoretical pI: Translated: 7.45; Mature: 7.45

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.2 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
3.4 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTSQAHEPDDLPETDDDGRIKGDVNGRMCIVTRQSGSPDELIRFVAGPDGNVVPDLKRQL
CCCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHC
PGRGCWVTPERALIEKAIAKKLFARALKRDVKAGPELLALLDRLMAQQLAGMMNMARKAG
CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QFISGATKVDAAVRSGNAIAVFHATDAAADGVRKLDQARKAWALGSDAGNEIPSFRLSSE
HHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
AEMDELMGQNAFIHACALAGQAGEGVVKRATMLEQYRLGGRSQAERDAARTEQ
HHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCC
>Mature Secondary Structure 
TSQAHEPDDLPETDDDGRIKGDVNGRMCIVTRQSGSPDELIRFVAGPDGNVVPDLKRQL
CCCCCCCCCCCCCCCCCEEEECCCCEEEEEECCCCCHHHHHHHHCCCCCCCCCHHHHHC
PGRGCWVTPERALIEKAIAKKLFARALKRDVKAGPELLALLDRLMAQQLAGMMNMARKAG
CCCCCEECHHHHHHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHH
QFISGATKVDAAVRSGNAIAVFHATDAAADGVRKLDQARKAWALGSDAGNEIPSFRLSSE
HHHCCHHHHHHHHHCCCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCCCH
AEMDELMGQNAFIHACALAGQAGEGVVKRATMLEQYRLGGRSQAERDAARTEQ
HHHHHHHCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHCCCCCHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA