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The map label for this gene is ydaL [C]

Identifier: 15887369

GI number: 15887369

Start: 6974

End: 7543

Strand: Direct

Name: ydaL [C]

Synonym: Atu0010

Alternate gene names: 15887369

Gene position: 6974-7543 (Clockwise)

Preceding gene: 15887368

Following gene: 15887370

Centisome position: 0.25

GC content: 58.25

Gene sequence:

>570_bases
ATGAAAGGCAGTCGCAAGCTCGGCAAGGAAGAACGCATTCTGTGGGGAAGGGTCGCAAAAACCACGCGGCCAATTTCCGG
CAGGCTGGAAGATTTGCTGGCTTTCGACGACGTAGAAGAACATCCGCTGGAACCCAGCGTTCCGCAAACTGGTAAAAGCG
CATTTCCGCGCATGATTGTGGAGACGGCGGAAGCACTGCCTGCGTCACCGGATAAAAAGCCGAAGACCCATCAGCCGATG
GAAAAGCCGGTCAAGCGCAAGCTCACCCGTGGCCGGTTGCCGCTGGAAGGGCGGATCGATCTGCACGGCATGTTCCAGAG
CGAAGCCCATGCGGTGCTCCTGGATTTCCTGCTGCGGGCGCATGAACGAGGCCTTCGCCATGTGCTGGTCATCACGGGCA
AGGGGCGTTCCATCGGTAGCGATGGTGCGCTGAAAAGGGCAGTGCCAATGTGGTTCGCCAAACCGGAATATCGCTACCTG
ATTTCGTCCTATGAGGATGCGTCGGCCAATCATGGTGGTGACGGTGCGCTTTATGTGCGGCTTTCGCGGCGGCGCGGTGA
AAAATCATGA

Upstream 100 bases:

>100_bases
CCGGCTCGGGTTTCGAAGCGGGAGAGCTTGCCGGCACGGTGCGCAACGAAGCCGATTTTTATATACTGCTGCCGCGGATT
GCTGCGGAAAGGTATCGGCG

Downstream 100 bases:

>100_bases
CGCCTTTTGCGGAGGCCGTGCGGCAGCTTCGTGAACGCAAGGGCGTGACGCAGAAGGAAATGGCCGCGGCAATCGGTGTG
TCACCGGCCTATCTTTCGGC

Product: hypothetical protein

Products: NA

Alternate protein names: Smr Domain-Containing Protein; DNA Repair Protein Smr/MutS Family; Smr Protein; Smr/MutS Family Protein; Smr/MutS Family DNA Repair Protein; Smr Domain Family Protein; Smr Protein/MutS2 Domain Protein; Smr Family Protein; Smr Protein/MutS2 C-Terminal; Smr Protein/Muts2-Like; DNA Repair Protein

Number of amino acids: Translated: 189; Mature: 189

Protein sequence:

>189_residues
MKGSRKLGKEERILWGRVAKTTRPISGRLEDLLAFDDVEEHPLEPSVPQTGKSAFPRMIVETAEALPASPDKKPKTHQPM
EKPVKRKLTRGRLPLEGRIDLHGMFQSEAHAVLLDFLLRAHERGLRHVLVITGKGRSIGSDGALKRAVPMWFAKPEYRYL
ISSYEDASANHGGDGALYVRLSRRRGEKS

Sequences:

>Translated_189_residues
MKGSRKLGKEERILWGRVAKTTRPISGRLEDLLAFDDVEEHPLEPSVPQTGKSAFPRMIVETAEALPASPDKKPKTHQPM
EKPVKRKLTRGRLPLEGRIDLHGMFQSEAHAVLLDFLLRAHERGLRHVLVITGKGRSIGSDGALKRAVPMWFAKPEYRYL
ISSYEDASANHGGDGALYVRLSRRRGEKS
>Mature_189_residues
MKGSRKLGKEERILWGRVAKTTRPISGRLEDLLAFDDVEEHPLEPSVPQTGKSAFPRMIVETAEALPASPDKKPKTHQPM
EKPVKRKLTRGRLPLEGRIDLHGMFQSEAHAVLLDFLLRAHERGLRHVLVITGKGRSIGSDGALKRAVPMWFAKPEYRYL
ISSYEDASANHGGDGALYVRLSRRRGEKS

Specific function: Unknown

COG id: COG2840

COG function: function code S; Uncharacterized protein conserved in bacteria

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 21211; Mature: 21211

Theoretical pI: Translated: 10.69; Mature: 10.69

Prosite motif: PS50828 SMR

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.6 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.6 %Met     (Mature Protein)
2.6 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MKGSRKLGKEERILWGRVAKTTRPISGRLEDLLAFDDVEEHPLEPSVPQTGKSAFPRMIV
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
ETAEALPASPDKKPKTHQPMEKPVKRKLTRGRLPLEGRIDLHGMFQSEAHAVLLDFLLRA
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
HERGLRHVLVITGKGRSIGSDGALKRAVPMWFAKPEYRYLISSYEDASANHGGDGALYVR
HHCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEE
LSRRRGEKS
EECCCCCCC
>Mature Secondary Structure
MKGSRKLGKEERILWGRVAKTTRPISGRLEDLLAFDDVEEHPLEPSVPQTGKSAFPRMIV
CCCCCCCCCHHHHHHHHHHHHCCCCHHHHHHHHHHCCCCCCCCCCCCCCCCHHHHHHHHH
ETAEALPASPDKKPKTHQPMEKPVKRKLTRGRLPLEGRIDLHGMFQSEAHAVLLDFLLRA
HHHHHCCCCCCCCCCCCCHHHHHHHHHHHHCCCCCCCCEEEEECCHHHHHHHHHHHHHHH
HERGLRHVLVITGKGRSIGSDGALKRAVPMWFAKPEYRYLISSYEDASANHGGDGALYVR
HHCCCEEEEEEECCCCCCCCCCCHHHHHHHHCCCCHHHHHHHCCCCCCCCCCCCCEEEEE
LSRRRGEKS
EECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: DNA [C]

Specific reaction: Protein + DNA = Protein-DNA [C]

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA