Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is coaD [H]
Identifier: 158423950
GI number: 158423950
Start: 2649061
End: 2649582
Strand: Reverse
Name: coaD [H]
Synonym: AZC_2326
Alternate gene names: 158423950
Gene position: 2649582-2649061 (Counterclockwise)
Preceding gene: 158423951
Following gene: 158423949
Centisome position: 49.34
GC content: 68.58
Gene sequence:
>522_bases ATGAGCCGACCCGACCACACGCGCCGCGTTGCCATCTATGCCGGTTCGTTCGATCCGCCGACGAACGGCCATCTCGATGT GGTCCGCTCGGCCTCGCGCCTCGCCGACCATCTCGTGCTGGCGGTCGGCATCCATCCCGGCAAGACCCCTCTGTTCACCG CCGACGAGCGGCTCGCGATGCTCAAGGACATCTGCGGTCCCATCGCGCAGGAGGAGGGCGCGACGCTCGAGGCCATCACC TTCGGCGATCTCGTAGTGAACACCGCCCGCCGGGTCGGCGCTACGCTGCTGATCCGCGGCCTGCGCGACGGCACCGACCT CGACTATGAAATGCAGATGGCGGGCATGAACGGCACCATGGCGCCGGAGATCCAGACCGTCTTTCTCCCGGCTTCGCCGC GCGTGCGCCCCATCACCGCCACGCTGGTCCGGCAAATCGCTGCCATGGGCGGCGAGGTCGCGCCGTTCGTGCCTGCGGAA GTGCTCGCGCGCCTGAAGGCCAAGTTCCCCTCCGCGTCCTGA
Upstream 100 bases:
>100_bases CCGCCGGCATTCTCGCCGGCGGGGCCTTGGTGCTGCTCGCCGCCGGCCGGCGCTGACCCGCCCCATTGCGCTGCGCGCCG TCTAAGGCTACCCCATCGCC
Downstream 100 bases:
>100_bases CCGGACGACCCGCCATTCACCCGCCGTCTCACGGGCGAAGACCCGCCGGCGATCCAAGGAGCCTTGTGATGTCCCGTCTC ATCGGCCGCCGTGAATTCAC
Product: coenzyme A biosynthesis protein
Products: NA
Alternate protein names: Dephospho-CoA pyrophosphorylase; Pantetheine-phosphate adenylyltransferase; PPAT [H]
Number of amino acids: Translated: 173; Mature: 172
Protein sequence:
>173_residues MSRPDHTRRVAIYAGSFDPPTNGHLDVVRSASRLADHLVLAVGIHPGKTPLFTADERLAMLKDICGPIAQEEGATLEAIT FGDLVVNTARRVGATLLIRGLRDGTDLDYEMQMAGMNGTMAPEIQTVFLPASPRVRPITATLVRQIAAMGGEVAPFVPAE VLARLKAKFPSAS
Sequences:
>Translated_173_residues MSRPDHTRRVAIYAGSFDPPTNGHLDVVRSASRLADHLVLAVGIHPGKTPLFTADERLAMLKDICGPIAQEEGATLEAIT FGDLVVNTARRVGATLLIRGLRDGTDLDYEMQMAGMNGTMAPEIQTVFLPASPRVRPITATLVRQIAAMGGEVAPFVPAE VLARLKAKFPSAS >Mature_172_residues SRPDHTRRVAIYAGSFDPPTNGHLDVVRSASRLADHLVLAVGIHPGKTPLFTADERLAMLKDICGPIAQEEGATLEAITF GDLVVNTARRVGATLLIRGLRDGTDLDYEMQMAGMNGTMAPEIQTVFLPASPRVRPITATLVRQIAAMGGEVAPFVPAEV LARLKAKFPSAS
Specific function: Reversibly transfers an adenylyl group from ATP to 4'- phosphopantetheine, yielding dephospho-CoA (dPCoA) and pyrophosphate [H]
COG id: COG0669
COG function: function code H; Phosphopantetheine adenylyltransferase
Gene ontology:
Cell location: Cytoplasm [H]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial CoaD family [H]
Homologues:
Organism=Escherichia coli, GI1790065, Length=161, Percent_Identity=41.6149068322981, Blast_Score=137, Evalue=3e-34,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR004821 - InterPro: IPR004820 - InterPro: IPR001980 - InterPro: IPR014729 [H]
Pfam domain/function: PF01467 CTP_transf_2 [H]
EC number: =2.7.7.3 [H]
Molecular weight: Translated: 18486; Mature: 18354
Theoretical pI: Translated: 7.68; Mature: 7.68
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.6 %Cys (Translated Protein) 4.0 %Met (Translated Protein) 4.6 %Cys+Met (Translated Protein) 0.6 %Cys (Mature Protein) 3.5 %Met (Mature Protein) 4.1 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSRPDHTRRVAIYAGSFDPPTNGHLDVVRSASRLADHLVLAVGIHPGKTPLFTADERLAM CCCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCEEECHHHHHH LKDICGPIAQEEGATLEAITFGDLVVNTARRVGATLLIRGLRDGTDLDYEMQMAGMNGTM HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHECCCCCCCCCEEEEEECCCCCC APEIQTVFLPASPRVRPITATLVRQIAAMGGEVAPFVPAEVLARLKAKFPSAS CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC >Mature Secondary Structure SRPDHTRRVAIYAGSFDPPTNGHLDVVRSASRLADHLVLAVGIHPGKTPLFTADERLAM CCCCCCEEEEEEECCCCCCCCCCHHHHHHHHHHHHHEEEEEECCCCCCCEEECHHHHHH LKDICGPIAQEEGATLEAITFGDLVVNTARRVGATLLIRGLRDGTDLDYEMQMAGMNGTM HHHHHHHHCCCCCCEEEEEEHHHHHHHHHHHHHHHHHHECCCCCCCCCEEEEEECCCCCC APEIQTVFLPASPRVRPITATLVRQIAAMGGEVAPFVPAEVLARLKAKFPSAS CCCEEEEEECCCCCCCHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA