Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is murI [H]
Identifier: 158423846
GI number: 158423846
Start: 2543195
End: 2544061
Strand: Direct
Name: murI [H]
Synonym: AZC_2222
Alternate gene names: 158423846
Gene position: 2543195-2544061 (Clockwise)
Preceding gene: 158423844
Following gene: 158423847
Centisome position: 47.36
GC content: 70.82
Gene sequence:
>867_bases ATGGCTGACATCCCTGCTCCGGCTCCGAGACTTGCCGTGCCGTCCCTCCATATCCAATGCCCCACCATCCTCGTGTTCGA CAGCGGCCTCGGCGGGCTGTCGGTGTTCCGCGAGGTGGCCCGCGCCCGTCCGGACGCCAGCTTCATCTATGCCGCCGATG ATGCCGCCTTCCCCTATGGCGCGCTGAGCGACGCGGCGCTGGTGGCGCGCGTGTCTTCGGTGATGGACACGCTGATCGCG GCCACCCGGCCGACGCTGGTGGTCGTGGCCTGCAATACGGCGTCCACCCTCGCGCTGCCGACCCTGCGCGCGGCCCACGG CCTGCCTTTCGTCGGCACGGTGCCGGCGGTGAAGCCCGCCTGCGCCGCATCGGTGACGCGCAAGGTGAGCGTGCTCGCCA CTCCCGGCACGGTGCGGCGCGATTATACGGCGAGCCTCGTGCGGGATTTCGCGGGCTCCTGCGAGGTGACGCTGGTCCCG AGCCCGCGTCTCGCGGAACTTGCGGAGGCCGTGATGCGCGGCGCCGCGATCGACGACGAGGACCTGCGCGCCGAGATCGC GCCCTGCTTCGTGCGATCGGAGACGGGGCGGACCGATACGGTGGTGCTCGCCTGCACCCATTATCCGCTGATCGTCGATC AGTTGCGCCGTGTCGCGCCCTGGCCTGTCAATTTCGTGGATCCTGCCCCCGCCATCGCGCGCCGCGTCGCCTCCCTGCTG GGGCCGACCGCCTTTGCCGGCAGCCCGAAGCCGGTGCGGGTCGTCTCGACGGGATCGGCGCTGGACGGTGCACTCGTCTC GCGCATCCTGCAGCGGGAAACGAATGCGCCGGAGGTGATCGCGCCGCCGTTTGCCCTCGCGTCCTGA
Upstream 100 bases:
>100_bases TGGCAATCCATATCGGCTGGAATGAGGCACCTGTCGCTTGTGCTCATTCTTCTTTTACGCGCCTCGGCCACAATCCCGCC CGTGCTCCCGAGGATAAGCC
Downstream 100 bases:
>100_bases GGCCGCGCCGATCACAAGGGCGCGGGCGCGCTGACGTTGCGGCAATTCGGGCTCGCCCGTGCCATCAGAATCTGGGAGGC TCCCGCGCCATGGACGACCA
Product: glutamate racemase
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 288; Mature: 287
Protein sequence:
>288_residues MADIPAPAPRLAVPSLHIQCPTILVFDSGLGGLSVFREVARARPDASFIYAADDAAFPYGALSDAALVARVSSVMDTLIA ATRPTLVVVACNTASTLALPTLRAAHGLPFVGTVPAVKPACAASVTRKVSVLATPGTVRRDYTASLVRDFAGSCEVTLVP SPRLAELAEAVMRGAAIDDEDLRAEIAPCFVRSETGRTDTVVLACTHYPLIVDQLRRVAPWPVNFVDPAPAIARRVASLL GPTAFAGSPKPVRVVSTGSALDGALVSRILQRETNAPEVIAPPFALAS
Sequences:
>Translated_288_residues MADIPAPAPRLAVPSLHIQCPTILVFDSGLGGLSVFREVARARPDASFIYAADDAAFPYGALSDAALVARVSSVMDTLIA ATRPTLVVVACNTASTLALPTLRAAHGLPFVGTVPAVKPACAASVTRKVSVLATPGTVRRDYTASLVRDFAGSCEVTLVP SPRLAELAEAVMRGAAIDDEDLRAEIAPCFVRSETGRTDTVVLACTHYPLIVDQLRRVAPWPVNFVDPAPAIARRVASLL GPTAFAGSPKPVRVVSTGSALDGALVSRILQRETNAPEVIAPPFALAS >Mature_287_residues ADIPAPAPRLAVPSLHIQCPTILVFDSGLGGLSVFREVARARPDASFIYAADDAAFPYGALSDAALVARVSSVMDTLIAA TRPTLVVVACNTASTLALPTLRAAHGLPFVGTVPAVKPACAASVTRKVSVLATPGTVRRDYTASLVRDFAGSCEVTLVPS PRLAELAEAVMRGAAIDDEDLRAEIAPCFVRSETGRTDTVVLACTHYPLIVDQLRRVAPWPVNFVDPAPAIARRVASLLG PTAFAGSPKPVRVVSTGSALDGALVSRILQRETNAPEVIAPPFALAS
Specific function: Provides the (R)-glutamate required for cell wall biosynthesis [H]
COG id: COG0796
COG function: function code M; Glutamate racemase
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the aspartate/glutamate racemases family [H]
Homologues:
Organism=Escherichia coli, GI87082355, Length=220, Percent_Identity=45.4545454545455, Blast_Score=174, Evalue=7e-45,
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015942 - InterPro: IPR001920 - InterPro: IPR018187 - InterPro: IPR004391 [H]
Pfam domain/function: PF01177 Asp_Glu_race [H]
EC number: =5.1.1.3 [H]
Molecular weight: Translated: 29982; Mature: 29851
Theoretical pI: Translated: 7.79; Mature: 7.79
Prosite motif: PS00923 ASP_GLU_RACEMASE_1 ; PS00924 ASP_GLU_RACEMASE_2
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.1 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.1 %Cys+Met (Translated Protein) 2.1 %Cys (Mature Protein) 0.7 %Met (Mature Protein) 2.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MADIPAPAPRLAVPSLHIQCPTILVFDSGLGGLSVFREVARARPDASFIYAADDAAFPYG CCCCCCCCCCCCCCEEEEECCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCC ALSDAALVARVSSVMDTLIAATRPTLVVVACNTASTLALPTLRAAHGLPFVGTVPAVKPA CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHH CAASVTRKVSVLATPGTVRRDYTASLVRDFAGSCEVTLVPSPRLAELAEAVMRGAAIDDE HHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCH DLRAEIAPCFVRSETGRTDTVVLACTHYPLIVDQLRRVAPWPVNFVDPAPAIARRVASLL HHHHHHHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH GPTAFAGSPKPVRVVSTGSALDGALVSRILQRETNAPEVIAPPFALAS CCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCHHCCC >Mature Secondary Structure ADIPAPAPRLAVPSLHIQCPTILVFDSGLGGLSVFREVARARPDASFIYAADDAAFPYG CCCCCCCCCCCCCEEEEECCEEEEEECCCCHHHHHHHHHHCCCCCEEEEEECCCCCCCC ALSDAALVARVSSVMDTLIAATRPTLVVVACNTASTLALPTLRAAHGLPFVGTVPAVKPA CHHHHHHHHHHHHHHHHHHHCCCCEEEEEEECCCCHHHHHHHHHHCCCCCCCCCCCCCHH CAASVTRKVSVLATPGTVRRDYTASLVRDFAGSCEVTLVPSPRLAELAEAVMRGAAIDDE HHHHHHHEEEEEECCCCCCHHHHHHHHHHHCCCCEEEEECCCCHHHHHHHHHHCCCCCCH DLRAEIAPCFVRSETGRTDTVVLACTHYPLIVDQLRRVAPWPVNFVDPAPAIARRVASLL HHHHHHHHEEEECCCCCCCEEEEEECCCHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHH GPTAFAGSPKPVRVVSTGSALDGALVSRILQRETNAPEVIAPPFALAS CCHHCCCCCCCEEEEECCCCHHHHHHHHHHHHCCCCCCEECCCHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA