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The map label for this gene is cyoA [H]

Identifier: 158423722

GI number: 158423722

Start: 2414580

End: 2415746

Strand: Direct

Name: cyoA [H]

Synonym: AZC_2098

Alternate gene names: 158423722

Gene position: 2414580-2415746 (Clockwise)

Preceding gene: 158423719

Following gene: 158423723

Centisome position: 44.97

GC content: 65.3

Gene sequence:

>1167_bases
GTGAGCCGGTTCCGTCTCCTTGCCGTCATGCCGCTTCTGGCGGTCCTGTGCGGCTGCAACTTCGTCGTTCTGGACCCCTC
CGGCGATATCGCCGTCCAGCAGCGTGACCTCATCCTGATCTCCACCGGGCTGATGCTCCTCATCATCATTCCGGTGATGG
TGCTGACGGCGCTGTTCGCCTGGCGCTACCGGCAGTCGAACACGGCGGCCAAATATGATCCGGAATGGCATCATTCGACC
AAGCTGGAGCTGGTGATCTGGTCGGCGCCGCTGGCCATCATCATCTGCCTCGGCGCCATCACCTGGATGGCGACCCATCT
GCTCGATCCCTACCGTCCGCTCTCGCGCATCGCGTCGGACCGCCCGCTGCCGGCGAACGTCAAGCCGCTCGAGGTCCAGG
TCGTGGCGCTCGACTGGAAGTGGCTGTTCATCTACCCGGAATTCGGGATCGCCACAGTTAACGAGATGGCTGCGCCGGTT
GATCGCCCGGTGACGTTCAGCCTCACCTCGTCCTCGGTGATGAACTCCTTCTTCGTCCCCGCGCTGGCCGGCCAGATCTA
CACGATGCCCGGCATGGAGACGAAGCTGCACGCGGTCATCAACGCTCCCGGCAACTTCCGCGGCTTCTCGGCCAATTACA
GCGGCGCCGGCTTCACCTACATGCAGTTCGCCTTCAAGGGCCTCTCCCACGACGACTTCGACAAGTGGGTCGCCAGCGTG
AAGGCGGGCAAGGACGGCGAACTCAGCCGCGCGGCCTATCTCGAACTGGAGCGTCCGAGCGAGAAGGTGCCGGTGCGCTA
CTATCCGAGCGTCGATCCCAAGCTCTTCAACGCCATCGTCAACATGTGCGTCGAGGCCAACAAGATGTGCATGGCCGACA
TGATGGCCATCGACGCCAAGGGCGGCCAGGGCCTCGAAAGCGCGCGCGCCGTGCTCCCGAGCTACGACAAGTATGCCCGC
CGCGGCACCGTTCTCGGCGGCGAGGCCACCTACGTGGTCGGCGTGTGCTCGCCCGAGGATCTCTCCGCTCAGGCCGGTTC
CGACCGCGCTCCGGTGGCCGTTGGCCAGCGCCGCGTGATCGGCGGCCCCTCCGCTCCCGTATTCACCCCCATCAGCGCAC
CCTCGGCGGTTCCCCTGCCGAGCCTGCGCACCCTTTCCAATTCCTGA

Upstream 100 bases:

>100_bases
AGGAGATTACGGACGGCTTGGGCAAATTGTCCAATGTCCCTTGTGCTGCACCGCAGCTAACCGGTCTGGCACCATGCGAT
CTTTCTAGGCAGGTGCTCCC

Downstream 100 bases:

>100_bases
CGCGAGGCGTCATGTCTGCAGCCATCTCAACCCCCGTAAATCCCATCTTCGGGCGGCTCACGCTGGAGAGCCTCCCGCTG
CATGAGCCGATCGTCGTCAT

Product: cytochrome o ubiquinol oxidase subunit II

Products: NA

Alternate protein names: Cytochrome o subunit 2; Cytochrome o ubiquinol oxidase subunit 2; Oxidase BO(3) subunit 2; Ubiquinol oxidase polypeptide II [H]

Number of amino acids: Translated: 388; Mature: 387

Protein sequence:

>388_residues
MSRFRLLAVMPLLAVLCGCNFVVLDPSGDIAVQQRDLILISTGLMLLIIIPVMVLTALFAWRYRQSNTAAKYDPEWHHST
KLELVIWSAPLAIIICLGAITWMATHLLDPYRPLSRIASDRPLPANVKPLEVQVVALDWKWLFIYPEFGIATVNEMAAPV
DRPVTFSLTSSSVMNSFFVPALAGQIYTMPGMETKLHAVINAPGNFRGFSANYSGAGFTYMQFAFKGLSHDDFDKWVASV
KAGKDGELSRAAYLELERPSEKVPVRYYPSVDPKLFNAIVNMCVEANKMCMADMMAIDAKGGQGLESARAVLPSYDKYAR
RGTVLGGEATYVVGVCSPEDLSAQAGSDRAPVAVGQRRVIGGPSAPVFTPISAPSAVPLPSLRTLSNS

Sequences:

>Translated_388_residues
MSRFRLLAVMPLLAVLCGCNFVVLDPSGDIAVQQRDLILISTGLMLLIIIPVMVLTALFAWRYRQSNTAAKYDPEWHHST
KLELVIWSAPLAIIICLGAITWMATHLLDPYRPLSRIASDRPLPANVKPLEVQVVALDWKWLFIYPEFGIATVNEMAAPV
DRPVTFSLTSSSVMNSFFVPALAGQIYTMPGMETKLHAVINAPGNFRGFSANYSGAGFTYMQFAFKGLSHDDFDKWVASV
KAGKDGELSRAAYLELERPSEKVPVRYYPSVDPKLFNAIVNMCVEANKMCMADMMAIDAKGGQGLESARAVLPSYDKYAR
RGTVLGGEATYVVGVCSPEDLSAQAGSDRAPVAVGQRRVIGGPSAPVFTPISAPSAVPLPSLRTLSNS
>Mature_387_residues
SRFRLLAVMPLLAVLCGCNFVVLDPSGDIAVQQRDLILISTGLMLLIIIPVMVLTALFAWRYRQSNTAAKYDPEWHHSTK
LELVIWSAPLAIIICLGAITWMATHLLDPYRPLSRIASDRPLPANVKPLEVQVVALDWKWLFIYPEFGIATVNEMAAPVD
RPVTFSLTSSSVMNSFFVPALAGQIYTMPGMETKLHAVINAPGNFRGFSANYSGAGFTYMQFAFKGLSHDDFDKWVASVK
AGKDGELSRAAYLELERPSEKVPVRYYPSVDPKLFNAIVNMCVEANKMCMADMMAIDAKGGQGLESARAVLPSYDKYARR
GTVLGGEATYVVGVCSPEDLSAQAGSDRAPVAVGQRRVIGGPSAPVFTPISAPSAVPLPSLRTLSNS

Specific function: Cytochrome o terminal oxidase complex is the component of the aerobic respiratory chain that predominates when cells are grown at high aeration [H]

COG id: COG1622

COG function: function code C; Heme/copper-type cytochrome/quinol oxidases, subunit 2

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the cytochrome c oxidase subunit 2 family [H]

Homologues:

Organism=Escherichia coli, GI1786635, Length=305, Percent_Identity=44.9180327868852, Blast_Score=275, Evalue=3e-75,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR012141
- InterPro:   IPR010514
- InterPro:   IPR008972
- InterPro:   IPR015964
- InterPro:   IPR002429
- InterPro:   IPR011759
- InterPro:   IPR006333 [H]

Pfam domain/function: PF00116 COX2; PF06481 COX_ARM [H]

EC number: 1.10.3.-

Molecular weight: Translated: 42224; Mature: 42092

Theoretical pI: Translated: 8.11; Mature: 8.11

Prosite motif: PS00013 PROKAR_LIPOPROTEIN ; PS50999 COX2_TM ; PS50857 COX2_CUA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.5 %Cys     (Translated Protein)
3.9 %Met     (Translated Protein)
5.4 %Cys+Met (Translated Protein)
1.6 %Cys     (Mature Protein)
3.6 %Met     (Mature Protein)
5.2 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSRFRLLAVMPLLAVLCGCNFVVLDPSGDIAVQQRDLILISTGLMLLIIIPVMVLTALFA
CCCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHH
WRYRQSNTAAKYDPEWHHSTKLELVIWSAPLAIIICLGAITWMATHLLDPYRPLSRIASD
HHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
RPLPANVKPLEVQVVALDWKWLFIYPEFGIATVNEMAAPVDRPVTFSLTSSSVMNSFFVP
CCCCCCCCCEEEEEEEEEEEEEEEEECCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHH
ALAGQIYTMPGMETKLHAVINAPGNFRGFSANYSGAGFTYMQFAFKGLSHDDFDKWVASV
HHCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
KAGKDGELSRAAYLELERPSEKVPVRYYPSVDPKLFNAIVNMCVEANKMCMADMMAIDAK
CCCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHEEECC
GGQGLESARAVLPSYDKYARRGTVLGGEATYVVGVCSPEDLSAQAGSDRAPVAVGQRRVI
CCCCHHHHHHHCCCHHHHHHCCCEECCCCEEEEEECCCCCCCCCCCCCCCCEECCCEEEE
GGPSAPVFTPISAPSAVPLPSLRTLSNS
CCCCCCEEECCCCCCCCCCCCHHHCCCC
>Mature Secondary Structure 
SRFRLLAVMPLLAVLCGCNFVVLDPSGDIAVQQRDLILISTGLMLLIIIPVMVLTALFA
CCHHHHHHHHHHHHHHCCCEEEECCCCCEEEEECCEEEEHHHHHHHHHHHHHHHHHHHH
WRYRQSNTAAKYDPEWHHSTKLELVIWSAPLAIIICLGAITWMATHLLDPYRPLSRIASD
HHHHCCCCCCCCCCCCCCCCEEEEEEECCHHHHHHHHHHHHHHHHHHCCCCHHHHHHHCC
RPLPANVKPLEVQVVALDWKWLFIYPEFGIATVNEMAAPVDRPVTFSLTSSSVMNSFFVP
CCCCCCCCCEEEEEEEEEEEEEEEEECCCCHHHHHHHCCCCCCEEEEECHHHHHHHHHHH
ALAGQIYTMPGMETKLHAVINAPGNFRGFSANYSGAGFTYMQFAFKGLSHDDFDKWVASV
HHCCCEEECCCCCEEEEEEEECCCCCCCCCCCCCCCCHHHHHHHHHCCCCCHHHHHHHHH
KAGKDGELSRAAYLELERPSEKVPVRYYPSVDPKLFNAIVNMCVEANKMCMADMMAIDAK
CCCCCCCCCEEEEEEECCCCCCCCEEECCCCCHHHHHHHHHHHHHCCHHHHHHHHEEECC
GGQGLESARAVLPSYDKYARRGTVLGGEATYVVGVCSPEDLSAQAGSDRAPVAVGQRRVI
CCCCHHHHHHHCCCHHHHHHCCCEECCCCEEEEEECCCCCCCCCCCCCCCCEECCCEEEE
GGPSAPVFTPISAPSAVPLPSLRTLSNS
CCCCCCEEECCCCCCCCCCCCHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: Oxidoreductases [C]

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: 9868765 [H]