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The map label for this gene is yjgF [C]

Identifier: 158423646

GI number: 158423646

Start: 2332905

End: 2333252

Strand: Direct

Name: yjgF [C]

Synonym: AZC_2022

Alternate gene names: 158423646

Gene position: 2332905-2333252 (Clockwise)

Preceding gene: 158423645

Following gene: 158423647

Centisome position: 43.45

GC content: 62.64

Gene sequence:

>348_bases
ATGTCCAAGCCCGCTCTGCCGTTCTCCCCCTGCCGCGAAGTCGGCGACATGCTCTATCTGTCGGGCGAGGTGCCGTTCGC
CGATGACGGGACGATCCCAGAGGGAATCGCGGCGCAGACCGATCTGGTTCTGGCACGCATTTCCCGTACGCTGGCCACCA
AGGGCCTGACGCTGGCGGATGTCGTCTCGGCCACCGTCTATCTCACCGACAAGTCCGACTTCGGTGCCTTCAACGTTGCT
TATGCCAAGCACTTCTCCGATCCTCTGCCGGTGCGCACTACGGTCATTGCGGATCTGGTCGTTCCGGCGAAGCTGGAAAT
CACCGTCATCGCCAAGCTCCCGGCCTGA

Upstream 100 bases:

>100_bases
CCGCCATGTCGGTCGTGGTCGCGGCCACCATCCGCACGCCCGCGCCGGAAGCGGCCGCGCAGGCGGCCTGAGCCCTTCTC
TTCCTTGTCAGAGGTGATCC

Downstream 100 bases:

>100_bases
GGACTGGATATGAAGACCGTCATCGTTCTGGGCGGCGGCATGGTGGGCGTGTCCACCGCCCTGCATCTGCGCCGCCGCAA
CTGGGATGTGGTTCTGGTGG

Product: YjgF family protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 115; Mature: 114

Protein sequence:

>115_residues
MSKPALPFSPCREVGDMLYLSGEVPFADDGTIPEGIAAQTDLVLARISRTLATKGLTLADVVSATVYLTDKSDFGAFNVA
YAKHFSDPLPVRTTVIADLVVPAKLEITVIAKLPA

Sequences:

>Translated_115_residues
MSKPALPFSPCREVGDMLYLSGEVPFADDGTIPEGIAAQTDLVLARISRTLATKGLTLADVVSATVYLTDKSDFGAFNVA
YAKHFSDPLPVRTTVIADLVVPAKLEITVIAKLPA
>Mature_114_residues
SKPALPFSPCREVGDMLYLSGEVPFADDGTIPEGIAAQTDLVLARISRTLATKGLTLADVVSATVYLTDKSDFGAFNVAY
AKHFSDPLPVRTTVIADLVVPAKLEITVIAKLPA

Specific function: Anaerobic degradation of L-threonine to propionate. [C]

COG id: COG0251

COG function: function code J; Putative translation initiation inhibitor, yjgF family

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the RutC family [H]

Homologues:

Organism=Escherichia coli, GI87082213, Length=110, Percent_Identity=31.8181818181818, Blast_Score=59, Evalue=8e-11,
Organism=Saccharomyces cerevisiae, GI6322138, Length=109, Percent_Identity=32.1100917431193, Blast_Score=67, Evalue=9e-13,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR013813
- InterPro:   IPR006175
- InterPro:   IPR006056
- InterPro:   IPR019897 [H]

Pfam domain/function: PF01042 Ribonuc_L-PSP [H]

EC number: NA

Molecular weight: Translated: 12177; Mature: 12046

Theoretical pI: Translated: 4.72; Mature: 4.72

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.9 %Cys     (Translated Protein)
1.7 %Met     (Translated Protein)
2.6 %Cys+Met (Translated Protein)
0.9 %Cys     (Mature Protein)
0.9 %Met     (Mature Protein)
1.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSKPALPFSPCREVGDMLYLSGEVPFADDGTIPEGIAAQTDLVLARISRTLATKGLTLAD
CCCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
VVSATVYLTDKSDFGAFNVAYAKHFSDPLPVRTTVIADLVVPAKLEITVIAKLPA
HHEEEEEEECCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEEECCC
>Mature Secondary Structure 
SKPALPFSPCREVGDMLYLSGEVPFADDGTIPEGIAAQTDLVLARISRTLATKGLTLAD
CCCCCCCHHHHHHCCEEEECCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHCCCHHHH
VVSATVYLTDKSDFGAFNVAYAKHFSDPLPVRTTVIADLVVPAKLEITVIAKLPA
HHEEEEEEECCCCCCEEEHHHHHHCCCCCCHHHHHHHHHHCCCEEEEEEEEECCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 11427726 [H]