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The map label for this gene is rssA [H]

Identifier: 158423565

GI number: 158423565

Start: 2241298

End: 2242614

Strand: Direct

Name: rssA [H]

Synonym: AZC_1941

Alternate gene names: 158423565

Gene position: 2241298-2242614 (Clockwise)

Preceding gene: 158423564

Following gene: 158423569

Centisome position: 41.74

GC content: 70.01

Gene sequence:

>1317_bases
ATGGCGCTCAATGTCTGGACGAGCTTCCGGCAGGCGCGGAGCACCGCCGATCTCGTCACCGACCGCACGCTGGACGCTGC
CGCGCGCGCCGTCGCCGAGGATGTGCGGGTGGATCGCGGTGTCATCGACGCGGTCGTGCCGCCGGTCGCGCTGGAGATGT
TCGACACGGGTCATCGGGACCGCGTCTATTACCGGGTGGATACCGACGCCGGGCGTCTTCTCGTGGGCTATCCGGATCTG
CCCGTCACGTCCGAACGCCTGAAGGACGGCATCCCCGCGCATTTTGCCGACACCTATCGCGGCGAGCCCCTGCGCCTCGC
GGCCCTGCGCTACCCCGTGGTGGGCGCCGGCGACGGCGAGCGCATCGTGGTGGTGGTGGGCGTCACTCTCGCCGGCCACG
GCGCCATGGTGCGGGAATTGTGGGTGGGCGGCATGGTCCGGCAACTGCTGCTGCTGGTGGCGGCGGCGTTTCTCGTTCTG
CTTGGCCTGCGGAGGGGCCTCGCCCCTTTGATGCGTCTGCGCGACGCTGTGCGCGACCGTGACCGGAACGACCTCACGCC
CATCTCGGACACTGCCGTGCAGAGCGAGCTGCGTCCGCTGGTCGAAGCCCTCAACGCCTATATGGGCCGCGTGGAGGGGC
AGATGGCGGCCCAGCGGCGCTTCGTGGCCAATGCGGCGCATCAGTTGCGCACGCCGCTGGCCCTGCTGGCGACGCAGGCC
ACCTTCGCCCGCCGCTCCGGCAATGGCGTGGAACGGGACCAGGCACTGGCGGGCGTCGAGGAATCCACCCGTCGCCTCGC
CCGCCTCGCGGCGCAACTCCTCACCTTGTCCCGGGCCGAGCCCGGCGGCCGGCGGCCGCGGGACGAGGTGATCGACCTCG
CCGATTCCACCCGGCGGGTGATGGAAGGCCTCGCGGATTTTGCCATCGAGCGCGGCATTGATCTCGGGCTCGACGTGCTC
TCAGAAGCAACAGCCGCAGGGGACGGCGCCATGCTGCGCGAGGCGATCGTGAACCTCGTAGACAATGCACTGCGCTACAC
ACCGACGGAAGGCACCGTGACAGTCACCGTCTCGGGCGGCCCTGACGGTGCGGTCCTGGTGGTGGAAGATTCCGGGCCAG
GCATCCCCCCAGAGGAGCGGGAGCGGGTATTCGAGCGCTTCTATCGCCTGCCGGGCACGCCCGGGGATGGGTCCGGCATC
GGTCTTTCCATCGTGCGAGAGGTGGTGGAGGGGGCAGGCGGCCACCTTGTGCTCGGCACCTCGGTGGCGGGCGGCCTGAG
GGTGGAGATGCATCTGCCGGAAGCCACGCCCGATTGA

Upstream 100 bases:

>100_bases
ATCGTCACCTTGCGTGGCCTCGGCTACCTGCTGCGCCATGCGCATTAAGAGCCTGCGCCTCCAGCTTCTGTGCTGGCTCC
TGCTGCCGCTCGCGGGGCTC

Downstream 100 bases:

>100_bases
GCGTGCAGTCTCGCAGACGAAAATGGCCGGGGAGGCCCCCGGCCATGGATGACGCGATACGGGAGAGGGCTTGCCTCAGT
TCTGCTCGTGGAACGGAACG

Product: ATP-binding protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 438; Mature: 437

Protein sequence:

>438_residues
MALNVWTSFRQARSTADLVTDRTLDAAARAVAEDVRVDRGVIDAVVPPVALEMFDTGHRDRVYYRVDTDAGRLLVGYPDL
PVTSERLKDGIPAHFADTYRGEPLRLAALRYPVVGAGDGERIVVVVGVTLAGHGAMVRELWVGGMVRQLLLLVAAAFLVL
LGLRRGLAPLMRLRDAVRDRDRNDLTPISDTAVQSELRPLVEALNAYMGRVEGQMAAQRRFVANAAHQLRTPLALLATQA
TFARRSGNGVERDQALAGVEESTRRLARLAAQLLTLSRAEPGGRRPRDEVIDLADSTRRVMEGLADFAIERGIDLGLDVL
SEATAAGDGAMLREAIVNLVDNALRYTPTEGTVTVTVSGGPDGAVLVVEDSGPGIPPEERERVFERFYRLPGTPGDGSGI
GLSIVREVVEGAGGHLVLGTSVAGGLRVEMHLPEATPD

Sequences:

>Translated_438_residues
MALNVWTSFRQARSTADLVTDRTLDAAARAVAEDVRVDRGVIDAVVPPVALEMFDTGHRDRVYYRVDTDAGRLLVGYPDL
PVTSERLKDGIPAHFADTYRGEPLRLAALRYPVVGAGDGERIVVVVGVTLAGHGAMVRELWVGGMVRQLLLLVAAAFLVL
LGLRRGLAPLMRLRDAVRDRDRNDLTPISDTAVQSELRPLVEALNAYMGRVEGQMAAQRRFVANAAHQLRTPLALLATQA
TFARRSGNGVERDQALAGVEESTRRLARLAAQLLTLSRAEPGGRRPRDEVIDLADSTRRVMEGLADFAIERGIDLGLDVL
SEATAAGDGAMLREAIVNLVDNALRYTPTEGTVTVTVSGGPDGAVLVVEDSGPGIPPEERERVFERFYRLPGTPGDGSGI
GLSIVREVVEGAGGHLVLGTSVAGGLRVEMHLPEATPD
>Mature_437_residues
ALNVWTSFRQARSTADLVTDRTLDAAARAVAEDVRVDRGVIDAVVPPVALEMFDTGHRDRVYYRVDTDAGRLLVGYPDLP
VTSERLKDGIPAHFADTYRGEPLRLAALRYPVVGAGDGERIVVVVGVTLAGHGAMVRELWVGGMVRQLLLLVAAAFLVLL
GLRRGLAPLMRLRDAVRDRDRNDLTPISDTAVQSELRPLVEALNAYMGRVEGQMAAQRRFVANAAHQLRTPLALLATQAT
FARRSGNGVERDQALAGVEESTRRLARLAAQLLTLSRAEPGGRRPRDEVIDLADSTRRVMEGLADFAIERGIDLGLDVLS
EATAAGDGAMLREAIVNLVDNALRYTPTEGTVTVTVSGGPDGAVLVVEDSGPGIPPEERERVFERFYRLPGTPGDGSGIG
LSIVREVVEGAGGHLVLGTSVAGGLRVEMHLPEATPD

Specific function: Member of the two-component regulatory system rssA/rssB involved in regulation of swarming motility which has been shown to be inhibited by saturated fatty acids. RssA/rssB regulates cellular fatty acid composition, hemolysin production and cell surface t

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein (Probable) [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 histidine kinase domain [H]

Homologues:

Organism=Escherichia coli, GI1789403, Length=380, Percent_Identity=31.8421052631579, Blast_Score=149, Evalue=4e-37,
Organism=Escherichia coli, GI1786783, Length=333, Percent_Identity=32.1321321321321, Blast_Score=148, Evalue=5e-37,
Organism=Escherichia coli, GI1786600, Length=231, Percent_Identity=35.4978354978355, Blast_Score=119, Evalue=4e-28,
Organism=Escherichia coli, GI1790861, Length=342, Percent_Identity=29.8245614035088, Blast_Score=107, Evalue=2e-24,
Organism=Escherichia coli, GI1788393, Length=270, Percent_Identity=28.1481481481481, Blast_Score=105, Evalue=6e-24,
Organism=Escherichia coli, GI1788279, Length=295, Percent_Identity=26.1016949152542, Blast_Score=101, Evalue=1e-22,
Organism=Escherichia coli, GI1790551, Length=290, Percent_Identity=29.3103448275862, Blast_Score=95, Evalue=8e-21,
Organism=Escherichia coli, GI1790346, Length=236, Percent_Identity=31.7796610169492, Blast_Score=95, Evalue=1e-20,
Organism=Escherichia coli, GI1787374, Length=325, Percent_Identity=27.3846153846154, Blast_Score=91, Evalue=1e-19,
Organism=Escherichia coli, GI1787894, Length=287, Percent_Identity=28.5714285714286, Blast_Score=89, Evalue=8e-19,
Organism=Escherichia coli, GI1788713, Length=265, Percent_Identity=25.6603773584906, Blast_Score=88, Evalue=1e-18,
Organism=Escherichia coli, GI1789808, Length=292, Percent_Identity=30.4794520547945, Blast_Score=79, Evalue=6e-16,
Organism=Escherichia coli, GI87081816, Length=285, Percent_Identity=30.1754385964912, Blast_Score=78, Evalue=9e-16,
Organism=Escherichia coli, GI1786912, Length=245, Percent_Identity=25.7142857142857, Blast_Score=78, Evalue=1e-15,
Organism=Escherichia coli, GI48994928, Length=227, Percent_Identity=26.8722466960352, Blast_Score=74, Evalue=2e-14,
Organism=Escherichia coli, GI1790436, Length=236, Percent_Identity=27.5423728813559, Blast_Score=72, Evalue=6e-14,
Organism=Escherichia coli, GI1789149, Length=258, Percent_Identity=25.5813953488372, Blast_Score=69, Evalue=6e-13,
Organism=Escherichia coli, GI145693157, Length=276, Percent_Identity=25.7246376811594, Blast_Score=65, Evalue=6e-12,
Organism=Escherichia coli, GI87082128, Length=254, Percent_Identity=27.1653543307087, Blast_Score=62, Evalue=6e-11,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003594
- InterPro:   IPR004358
- InterPro:   IPR003661
- InterPro:   IPR005467
- InterPro:   IPR009082 [H]

Pfam domain/function: PF02518 HATPase_c; PF00512 HisKA [H]

EC number: =2.7.13.3 [H]

Molecular weight: Translated: 47019; Mature: 46888

Theoretical pI: Translated: 5.24; Mature: 5.24

Prosite motif: PS50885 HAMP ; PS50109 HIS_KIN

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.0 %Cys     (Translated Protein)
2.3 %Met     (Translated Protein)
2.3 %Cys+Met (Translated Protein)
0.0 %Cys     (Mature Protein)
2.1 %Met     (Mature Protein)
2.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MALNVWTSFRQARSTADLVTDRTLDAAARAVAEDVRVDRGVIDAVVPPVALEMFDTGHRD
CEECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
RVYYRVDTDAGRLLVGYPDLPVTSERLKDGIPAHFADTYRGEPLRLAALRYPVVGAGDGE
EEEEEEECCCCEEEEECCCCCCCHHHHHCCCCCHHHHHCCCCCEEEEEEECCEEECCCCC
RIVVVVGVTLAGHGAMVRELWVGGMVRQLLLLVAAAFLVLLGLRRGLAPLMRLRDAVRDR
EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRNDLTPISDTAVQSELRPLVEALNAYMGRVEGQMAAQRRFVANAAHQLRTPLALLATQA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TFARRSGNGVERDQALAGVEESTRRLARLAAQLLTLSRAEPGGRRPRDEVIDLADSTRRV
HHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
MEGLADFAIERGIDLGLDVLSEATAAGDGAMLREAIVNLVDNALRYTPTEGTVTVTVSGG
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECC
PDGAVLVVEDSGPGIPPEERERVFERFYRLPGTPGDGSGIGLSIVREVVEGAGGHLVLGT
CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
SVAGGLRVEMHLPEATPD
CCCCCEEEEEECCCCCCC
>Mature Secondary Structure 
ALNVWTSFRQARSTADLVTDRTLDAAARAVAEDVRVDRGVIDAVVPPVALEMFDTGHRD
EECHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHCCCCCC
RVYYRVDTDAGRLLVGYPDLPVTSERLKDGIPAHFADTYRGEPLRLAALRYPVVGAGDGE
EEEEEEECCCCEEEEECCCCCCCHHHHHCCCCCHHHHHCCCCCEEEEEEECCEEECCCCC
RIVVVVGVTLAGHGAMVRELWVGGMVRQLLLLVAAAFLVLLGLRRGLAPLMRLRDAVRDR
EEEEEEEEEECCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCC
DRNDLTPISDTAVQSELRPLVEALNAYMGRVEGQMAAQRRFVANAAHQLRTPLALLATQA
CCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCHHHHHHHH
TFARRSGNGVERDQALAGVEESTRRLARLAAQLLTLSRAEPGGRRPRDEVIDLADSTRRV
HHHHHCCCCCCHHHHHHCHHHHHHHHHHHHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHH
MEGLADFAIERGIDLGLDVLSEATAAGDGAMLREAIVNLVDNALRYTPTEGTVTVTVSGG
HHHHHHHHHHCCCHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHHEECCCCCEEEEEEECC
PDGAVLVVEDSGPGIPPEERERVFERFYRLPGTPGDGSGIGLSIVREVVEGAGGHLVLGT
CCCEEEEEECCCCCCCHHHHHHHHHHHHHCCCCCCCCCCCHHHHHHHHHHCCCCEEEEEC
SVAGGLRVEMHLPEATPD
CCCCCEEEEEECCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Unstructured

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 6.0

TargetDB status: NA

Availability: NA

References: NA