Definition | Azorhizobium caulinodans ORS 571, complete genome. |
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Accession | NC_009937 |
Length | 5,369,772 |
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The map label for this gene is glnH [H]
Identifier: 158423460
GI number: 158423460
Start: 2101358
End: 2102401
Strand: Direct
Name: glnH [H]
Synonym: AZC_1836
Alternate gene names: 158423460
Gene position: 2101358-2102401 (Clockwise)
Preceding gene: 158423451
Following gene: 158423461
Centisome position: 39.13
GC content: 63.03
Gene sequence:
>1044_bases GTGCACGGACGGTTGTATTCATGGCTGCATATTTTTTGTGCGCGACGACCGCCGCCATGTCATGCTGGAAAGGCGGATGC CGTAAGGTCCGGTTCGGCGGGAGCGTTGCATGAGGCGCGCGCTCGACTGGCTTGGTTCTTGCTGTGGCGTCGGCAGTCCC GCGTGAGTCTCGCCTCGCCGGTTCTGAATAATCGCGGCTCGGGGAGCTCAGCCCTCGGCCCAGGATGGGGATCCTCCATG AAAAAGCTTCTGATTGCGTCCGCCCTTGCCCTGCTCGCGGGCACCGTGGCGGCTTCCGCCGACGTGCTGGACAAGATCAA GGAGAAGGGCGTCCTGACGGTTGGCGTGAAGGCCGACTACAAGCCGTTCGGCTTCCGCGATCCCTCGGGCGCCATCGTCG GCATCGAGCCGGATCTGGCCGCCGACGTGGCCAAGCGCCTCGGCGTGAAGCTGGAGCTGGTGCCGGTGGTCTCCGCCAAC CGCATCGAGTTCCTCCAGCAGGGCAAGATCGACCTGATGATCGCCACCATGTCCGACAAGCCGGAGCGCCGGAAGGTCGT GCTGGCCATCGACCCGCCCTATTATTCCGACGCGGTGAACATCCTTCTCTCCAAGAAGGTGAAGAACGTCACTAAGTGGG AAGACCTGAAGGGCAAGGTGCTCTGCGGCACTTCGGGCGCCTGGTACAACAAGGACGTGTCCACGAAGTACGGCGCCGAG GTGAAGGCCTTCGACGGCTCCGAGAAGCCGCTGTTCGCGCTCAAGGGCGGCGAGTGCATCGGCTACCTGTATGACCAGAC CTTCATTCAGGGCAAGCTGCTCGACGCCGAGTGGACCGCCGACTACGCGATGCCGCTGCCTGGCGTGATGGAAGCCCCGT GGATTCTCGCGGTGGCGCCGGGCGAGGACAAGTTCGCCAAGTTCATGACCGACACCACCCTCGACTGGATGAAGACCGGC TTCATCGTGAACGAGGAGAAGAAGTGGGGCATCGAGCCGACCGACTATTCCAAGCGCATGCACGAAGAGAAGAAGGGCTC CTGA
Upstream 100 bases:
>100_bases CCAGAACAGAAGTCGATCCGAAAGCCTGTGTCCCATGCCGACTCCATCGCATCTGCTGGTTGAATCTTAATGGCTTGCGG CCACCCGTCCATCATGCAGT
Downstream 100 bases:
>100_bases GCCCAAAGGGGCGCGCGGCTTCGGCGGCGCGCCCTTCTGTGTACAGAACCGGCTTTCCGGACGCCCTCGCGGGCAAGCGG GTTTCCTGATGGTGAAAAAT
Product: polar amino acid ABC transporter substrate-binding protein
Products: NA
Alternate protein names: NA
Number of amino acids: Translated: 347; Mature: 347
Protein sequence:
>347_residues MHGRLYSWLHIFCARRPPPCHAGKADAVRSGSAGALHEARARLAWFLLWRRQSRVSLASPVLNNRGSGSSALGPGWGSSM KKLLIASALALLAGTVAASADVLDKIKEKGVLTVGVKADYKPFGFRDPSGAIVGIEPDLAADVAKRLGVKLELVPVVSAN RIEFLQQGKIDLMIATMSDKPERRKVVLAIDPPYYSDAVNILLSKKVKNVTKWEDLKGKVLCGTSGAWYNKDVSTKYGAE VKAFDGSEKPLFALKGGECIGYLYDQTFIQGKLLDAEWTADYAMPLPGVMEAPWILAVAPGEDKFAKFMTDTTLDWMKTG FIVNEEKKWGIEPTDYSKRMHEEKKGS
Sequences:
>Translated_347_residues MHGRLYSWLHIFCARRPPPCHAGKADAVRSGSAGALHEARARLAWFLLWRRQSRVSLASPVLNNRGSGSSALGPGWGSSM KKLLIASALALLAGTVAASADVLDKIKEKGVLTVGVKADYKPFGFRDPSGAIVGIEPDLAADVAKRLGVKLELVPVVSAN RIEFLQQGKIDLMIATMSDKPERRKVVLAIDPPYYSDAVNILLSKKVKNVTKWEDLKGKVLCGTSGAWYNKDVSTKYGAE VKAFDGSEKPLFALKGGECIGYLYDQTFIQGKLLDAEWTADYAMPLPGVMEAPWILAVAPGEDKFAKFMTDTTLDWMKTG FIVNEEKKWGIEPTDYSKRMHEEKKGS >Mature_347_residues MHGRLYSWLHIFCARRPPPCHAGKADAVRSGSAGALHEARARLAWFLLWRRQSRVSLASPVLNNRGSGSSALGPGWGSSM KKLLIASALALLAGTVAASADVLDKIKEKGVLTVGVKADYKPFGFRDPSGAIVGIEPDLAADVAKRLGVKLELVPVVSAN RIEFLQQGKIDLMIATMSDKPERRKVVLAIDPPYYSDAVNILLSKKVKNVTKWEDLKGKVLCGTSGAWYNKDVSTKYGAE VKAFDGSEKPLFALKGGECIGYLYDQTFIQGKLLDAEWTADYAMPLPGVMEAPWILAVAPGEDKFAKFMTDTTLDWMKTG FIVNEEKKWGIEPTDYSKRMHEEKKGS
Specific function: Part of the ABC transporter complex glnHMPQ involved in glutamine transport [H]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cell membrane; Lipid-anchor (Potential) [H]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: Belongs to the bacterial solute-binding protein 3 family [H]
Homologues:
Organism=Escherichia coli, GI1788228, Length=192, Percent_Identity=31.7708333333333, Blast_Score=72, Evalue=5e-14, Organism=Escherichia coli, GI1786876, Length=244, Percent_Identity=24.1803278688525, Blast_Score=67, Evalue=2e-12,
Paralogues:
None
Copy number: 1920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 1060 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). 80 Molecules/Cell In: Stationary Phase, Rich Media (Based on E. coli). [C]
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR015683 - InterPro: IPR001638 - InterPro: IPR018313 [H]
Pfam domain/function: PF00497 SBP_bac_3 [H]
EC number: NA
Molecular weight: Translated: 37990; Mature: 37990
Theoretical pI: Translated: 9.70; Mature: 9.70
Prosite motif: PS00092 N6_MTASE
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 2.6 %Met (Translated Protein) 3.7 %Cys+Met (Translated Protein) 1.2 %Cys (Mature Protein) 2.6 %Met (Mature Protein) 3.7 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MHGRLYSWLHIFCARRPPPCHAGKADAVRSGSAGALHEARARLAWFLLWRRQSRVSLASP CCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH VLNNRGSGSSALGPGWGSSMKKLLIASALALLAGTVAASADVLDKIKEKGVLTVGVKADY HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC KPFGFRDPSGAIVGIEPDLAADVAKRLGVKLELVPVVSANRIEFLQQGKIDLMIATMSDK CCCCCCCCCCCEEEECCHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCEEEEEEECCCC PERRKVVLAIDPPYYSDAVNILLSKKVKNVTKWEDLKGKVLCGTSGAWYNKDVSTKYGAE CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCE VKAFDGSEKPLFALKGGECIGYLYDQTFIQGKLLDAEWTADYAMPLPGVMEAPWILAVAP EEECCCCCCCEEEEECCCEEEEEECCHHHCCEEECCCCCCCCCCCCCCCCCCCEEEEECC GEDKFAKFMTDTTLDWMKTGFIVNEEKKWGIEPTDYSKRMHEEKKGS CCHHHHHHHHHCHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHCCC >Mature Secondary Structure MHGRLYSWLHIFCARRPPPCHAGKADAVRSGSAGALHEARARLAWFLLWRRQSRVSLASP CCCHHHHHHHHHHCCCCCCCCCCCCHHHCCCCCCHHHHHHHHHHHHHHHHHCCCHHHHHH VLNNRGSGSSALGPGWGSSMKKLLIASALALLAGTVAASADVLDKIKEKGVLTVGVKADY HHCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCEEEEEEECCC KPFGFRDPSGAIVGIEPDLAADVAKRLGVKLELVPVVSANRIEFLQQGKIDLMIATMSDK CCCCCCCCCCCEEEECCHHHHHHHHHCCCEEEEEEECCCCHHHHHHCCCEEEEEEECCCC PERRKVVLAIDPPYYSDAVNILLSKKVKNVTKWEDLKGKVLCGTSGAWYNKDVSTKYGAE CCCCEEEEEECCCCHHHHHHHHHHHHHHHHHHHHCCCCEEEECCCCCCCCCCCCCCCCCE VKAFDGSEKPLFALKGGECIGYLYDQTFIQGKLLDAEWTADYAMPLPGVMEAPWILAVAP EEECCCCCCCEEEEECCCEEEEEECCHHHCCEEECCCCCCCCCCCCCCCCCCCEEEEECC GEDKFAKFMTDTTLDWMKTGFIVNEEKKWGIEPTDYSKRMHEEKKGS CCHHHHHHHHHCHHHHHHCCCEEECCCCCCCCCCHHHHHHHHHHCCC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 7.0
TargetDB status: NA
Availability: NA
References: 7551042; 9384377 [H]