Definition Azorhizobium caulinodans ORS 571, complete genome.
Accession NC_009937
Length 5,369,772

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The map label for this gene is gsiD [H]

Identifier: 158423176

GI number: 158423176

Start: 1764942

End: 1765826

Strand: Reverse

Name: gsiD [H]

Synonym: AZC_1552

Alternate gene names: 158423176

Gene position: 1765826-1764942 (Counterclockwise)

Preceding gene: 158423177

Following gene: 158423175

Centisome position: 32.88

GC content: 67.68

Gene sequence:

>885_bases
ATGACCGCAACGGACACCGCGCTTCAGGCCGCGCCGGCGCAGAAGGCGCGCGGCTATTGGGCGACCGTCGGCCGCCGCCT
CACGCGGGACAAGGTGAGCATGGTCTGCGCCCTGATCCTGCTCGCCATCCTGCTGGCCGCGCTCCTCGCGCCTTATCTGC
ACCTCGCCGATCCCTATCAGGGCTCCATGGTGCGCCGGCTGCGCCACATCGGCACGCCGGGCTATCCGCTGGGCACCGAC
GAACTCGGCCGCGACATGCTCTCGCGCCTCATCTATGGCGGGCGCCTGTCGCTGCTCATCGGCATCCTGCCGGTGGTGCT
GGCCTTCATCATCGGCACCAGCCTCGGCCTCGTGGCCGGCTATGCGGGTGGCTGGCTCAACACCGCCATCATGCGCACGG
TGGACGTGTTCTACGCCTTCCCCTCCGTGCTGCTGGCCATCGCCATCTCGGGCGTGCTGGGGGCGGGCATCGTCAATTCC
ATCGTCTCGCTCACGGTGGTGTTCGTGCCGCAGATCACCCGCGTGGCGGAGAGCGTGACCACCGGCGTGCGCAATCTCGA
TTTCGTGGATGCCGCCCGTGCCTCGGGGGCCGGCGCCCTCACCATCATGCGCGTGCACATGCTGGGCAACGTGCTCGGCC
CGATCTTCGTCTATTCGACCGGCCTGATCTCGGTGTCGATGATCCTGGCCGCCGGCCTCTCCTTCCTCGGCCTCGGCACC
AAGCCGCCGGAGCCGGAATGGGGCCTGATGCTCAACACCCTGCGCACCGCCATCTATGTGAACCCGTGGGTGGCCGCCAT
GCCGGGCGTGATGATCTTCGCCGTCTCCATCTGCTTCAACCTCTTGAGTGACGGCCTGCGCAGCGCCATGGACATCAGGA
ACTGA

Upstream 100 bases:

>100_bases
CAGGGCACCATTCTCGTGCTGGCGCTGTTCTTCGTCTTCCTCAACCTCGTGGTCGATATCGCCCAGGCGTCCATCGATCC
GCGCATCAAGCGGGCCTGAC

Downstream 100 bases:

>100_bases
CATGCTGGAGCAGCTTGAAGACATTGGCGGCGCCGCGCAGCCTCTGCTGGAGGTGAAGGGCCTCGTGAAGCACTTCCCCG
TGGGCGGAGGCCTCTTCGCC

Product: ABC transporter permease

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 294; Mature: 293

Protein sequence:

>294_residues
MTATDTALQAAPAQKARGYWATVGRRLTRDKVSMVCALILLAILLAALLAPYLHLADPYQGSMVRRLRHIGTPGYPLGTD
ELGRDMLSRLIYGGRLSLLIGILPVVLAFIIGTSLGLVAGYAGGWLNTAIMRTVDVFYAFPSVLLAIAISGVLGAGIVNS
IVSLTVVFVPQITRVAESVTTGVRNLDFVDAARASGAGALTIMRVHMLGNVLGPIFVYSTGLISVSMILAAGLSFLGLGT
KPPEPEWGLMLNTLRTAIYVNPWVAAMPGVMIFAVSICFNLLSDGLRSAMDIRN

Sequences:

>Translated_294_residues
MTATDTALQAAPAQKARGYWATVGRRLTRDKVSMVCALILLAILLAALLAPYLHLADPYQGSMVRRLRHIGTPGYPLGTD
ELGRDMLSRLIYGGRLSLLIGILPVVLAFIIGTSLGLVAGYAGGWLNTAIMRTVDVFYAFPSVLLAIAISGVLGAGIVNS
IVSLTVVFVPQITRVAESVTTGVRNLDFVDAARASGAGALTIMRVHMLGNVLGPIFVYSTGLISVSMILAAGLSFLGLGT
KPPEPEWGLMLNTLRTAIYVNPWVAAMPGVMIFAVSICFNLLSDGLRSAMDIRN
>Mature_293_residues
TATDTALQAAPAQKARGYWATVGRRLTRDKVSMVCALILLAILLAALLAPYLHLADPYQGSMVRRLRHIGTPGYPLGTDE
LGRDMLSRLIYGGRLSLLIGILPVVLAFIIGTSLGLVAGYAGGWLNTAIMRTVDVFYAFPSVLLAIAISGVLGAGIVNSI
VSLTVVFVPQITRVAESVTTGVRNLDFVDAARASGAGALTIMRVHMLGNVLGPIFVYSTGLISVSMILAAGLSFLGLGTK
PPEPEWGLMLNTLRTAIYVNPWVAAMPGVMIFAVSICFNLLSDGLRSAMDIRN

Specific function: Part of the ABC transporter complex gsiABCD involved in glutathione import. Probably responsible for the translocation of the substrate across the membrane [H]

COG id: COG1173

COG function: function code EP; ABC-type dipeptide/oligopeptide/nickel transport systems, permease components

Gene ontology:

Cell location: Cell inner membrane; Multi-pass membrane protein [H]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 ABC transmembrane type-1 domain [H]

Homologues:

Organism=Escherichia coli, GI1787054, Length=278, Percent_Identity=38.8489208633094, Blast_Score=200, Evalue=9e-53,
Organism=Escherichia coli, GI1787760, Length=280, Percent_Identity=32.1428571428571, Blast_Score=155, Evalue=4e-39,
Organism=Escherichia coli, GI1789964, Length=284, Percent_Identity=36.9718309859155, Blast_Score=148, Evalue=3e-37,
Organism=Escherichia coli, GI1789889, Length=217, Percent_Identity=37.3271889400922, Blast_Score=135, Evalue=3e-33,
Organism=Escherichia coli, GI1787498, Length=282, Percent_Identity=30.1418439716312, Blast_Score=126, Evalue=1e-30,
Organism=Escherichia coli, GI1787549, Length=283, Percent_Identity=30.0353356890459, Blast_Score=115, Evalue=3e-27,
Organism=Escherichia coli, GI1788505, Length=220, Percent_Identity=28.6363636363636, Blast_Score=75, Evalue=4e-15,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000515 [H]

Pfam domain/function: PF00528 BPD_transp_1 [H]

EC number: NA

Molecular weight: Translated: 31145; Mature: 31013

Theoretical pI: Translated: 9.94; Mature: 9.94

Prosite motif: PS50928 ABC_TM1

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.7 %Cys     (Translated Protein)
4.1 %Met     (Translated Protein)
4.8 %Cys+Met (Translated Protein)
0.7 %Cys     (Mature Protein)
3.8 %Met     (Mature Protein)
4.4 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure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CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC
>Mature Secondary Structure 
TATDTALQAAPAQKARGYWATVGRRLTRDKVSMVCALILLAILLAALLAPYLHLADPYQ
CCCCHHHHHCCHHHHCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
GSMVRRLRHIGTPGYPLGTDELGRDMLSRLIYGGRLSLLIGILPVVLAFIIGTSLGLVAG
HHHHHHHHHCCCCCCCCCHHHHHHHHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHHHHH
YAGGWLNTAIMRTVDVFYAFPSVLLAIAISGVLGAGIVNSIVSLTVVFVPQITRVAESVT
HCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
TGVRNLDFVDAARASGAGALTIMRVHMLGNVLGPIFVYSTGLISVSMILAAGLSFLGLGT
HHHHCCHHHHHHHCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC
KPPEPEWGLMLNTLRTAIYVNPWVAAMPGVMIFAVSICFNLLSDGLRSAMDIRN
CCCCCCHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA