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The map label for this gene is amaB [H]

Identifier: 158423172

GI number: 158423172

Start: 1760043

End: 1761302

Strand: Reverse

Name: amaB [H]

Synonym: AZC_1548

Alternate gene names: 158423172

Gene position: 1761302-1760043 (Counterclockwise)

Preceding gene: 158423173

Following gene: 158423167

Centisome position: 32.8

GC content: 67.7

Gene sequence:

>1260_bases
ATGTCCGAAAAGCCGTCCAACCTGCCCGTCAACAGCGACCGCCTCTGGGGCACCATCCTCGAGACCGCCGCCTTCGGCGC
GACGCCCAAGGGAGGCGTGCGTCGCCTCACCCTCTCTCAGGAAGACCGCAAGGTCCGCGACTGGTTCAAGGCCGCCTGCG
AGGCCGCTGGCTGCACCGTCACCGTGGACGCACTCGGCAACATGTTCGCCCTGCGGCCGGGCCGCGATCCTTCCCGCGCC
CCCATCGGCCTCGGCTCGCATCTCGACACCCAGCCCACGGGCGGCAAGTTCGACGGCATCCTCGGCACGCTGGCGGCGCT
GGAAGTTGTCCGCACGCTCAATGATGCCGGCATCGAGACAGAAGCGCCGCTCTGCGTCGCCAACTGGACCAATGAGGAAG
GTTCCCGCTTCGCCCCGGCCATGATGGGTTCGGCGGCCTTCGTGGGCGACTTCACGGTGGAGAATATTCTCGGCCGCAAG
GATGCGGAGGGCGTCACCGTGAAGGAGGCGCTGGAGGCCATCGGCTATGTGGGCGCCGCCCCGGTCGGCAGCCAGCCGTT
CGAGGCCTTCGTGGAACTGCATATCGAGCAGGGGCCCATCCTCGAGGCCGAGAACAAGACCATTGGCGTGGTCGAGCACG
GGCAGGGCATCGTCTGGTACGACGGCCACATCACCGGCTTCGAGAGCCATGCGGGCTCCACCCCCATGCCGCTGCGGCGC
GACGCGCTCGCCACCTTCTCTCAGATCGTGCTGGCGGTCGAAGCCATCGCTCGCAAGCACGGGCCGGATGCGGTGGGCAC
GGTGGGCGAAGTCACTATCGCCAATCCCTCGCGCAATGTGATTCCAGGCGAGGTGAACTTCACCTGCGAGTTCCGCTCGC
CCCATGCCGAGATTCTGAAGGCGCTGGAGGCGGATTTTGCCGCCGCCGTGACGGAGATCGCGGCCGGCCGCAAGGGCGTC
ACGGTGGAGATCGAGCAGGTGTGGCGGAAGGACCCCACCCATTTCGACCCGAAGGTCATCGGCGCCATCCGCGAGGCGGC
GGAAGGGCTCGGCTACAGTAACCGGCCCATGGTCTCCGGCGCGGGGCACGATGCCTTCAACCTCGCCACCAGGATGCCGG
TGGCGATGATCTTCGTGTCCTGCAAGGACGGCCTGAGCCACAATGAGCTGGAGGACGCGACGCAGGCCGATTGCACGGCC
GGCGCCAACGTCCTGCTGCACACGGTGCTGTCGCTGGCCGGCGTCGCGAACGCTGCCTGA

Upstream 100 bases:

>100_bases
CGCGGCAGATTTGCCGTGAACGCCTGCCCCCGGCTGTGGAACTCGCCCCCGGTCGGATCGTAAGGTGCGTGCTGGCTGAA
GAAAACGTCCCGGTGATCTG

Downstream 100 bases:

>100_bases
CGAGGAGAGGGGCGGAGCGCCGCCCCTTCCCGCTCAGGTGTTGATGGCGATCTTCTCCACCTGCTCCAGATGATGCTGGA
GCATGGGCAACGTCTGCTGC

Product: allantoate amidohydrolase

Products: NA

Alternate protein names: L-carbamoylase [H]

Number of amino acids: Translated: 419; Mature: 418

Protein sequence:

>419_residues
MSEKPSNLPVNSDRLWGTILETAAFGATPKGGVRRLTLSQEDRKVRDWFKAACEAAGCTVTVDALGNMFALRPGRDPSRA
PIGLGSHLDTQPTGGKFDGILGTLAALEVVRTLNDAGIETEAPLCVANWTNEEGSRFAPAMMGSAAFVGDFTVENILGRK
DAEGVTVKEALEAIGYVGAAPVGSQPFEAFVELHIEQGPILEAENKTIGVVEHGQGIVWYDGHITGFESHAGSTPMPLRR
DALATFSQIVLAVEAIARKHGPDAVGTVGEVTIANPSRNVIPGEVNFTCEFRSPHAEILKALEADFAAAVTEIAAGRKGV
TVEIEQVWRKDPTHFDPKVIGAIREAAEGLGYSNRPMVSGAGHDAFNLATRMPVAMIFVSCKDGLSHNELEDATQADCTA
GANVLLHTVLSLAGVANAA

Sequences:

>Translated_419_residues
MSEKPSNLPVNSDRLWGTILETAAFGATPKGGVRRLTLSQEDRKVRDWFKAACEAAGCTVTVDALGNMFALRPGRDPSRA
PIGLGSHLDTQPTGGKFDGILGTLAALEVVRTLNDAGIETEAPLCVANWTNEEGSRFAPAMMGSAAFVGDFTVENILGRK
DAEGVTVKEALEAIGYVGAAPVGSQPFEAFVELHIEQGPILEAENKTIGVVEHGQGIVWYDGHITGFESHAGSTPMPLRR
DALATFSQIVLAVEAIARKHGPDAVGTVGEVTIANPSRNVIPGEVNFTCEFRSPHAEILKALEADFAAAVTEIAAGRKGV
TVEIEQVWRKDPTHFDPKVIGAIREAAEGLGYSNRPMVSGAGHDAFNLATRMPVAMIFVSCKDGLSHNELEDATQADCTA
GANVLLHTVLSLAGVANAA
>Mature_418_residues
SEKPSNLPVNSDRLWGTILETAAFGATPKGGVRRLTLSQEDRKVRDWFKAACEAAGCTVTVDALGNMFALRPGRDPSRAP
IGLGSHLDTQPTGGKFDGILGTLAALEVVRTLNDAGIETEAPLCVANWTNEEGSRFAPAMMGSAAFVGDFTVENILGRKD
AEGVTVKEALEAIGYVGAAPVGSQPFEAFVELHIEQGPILEAENKTIGVVEHGQGIVWYDGHITGFESHAGSTPMPLRRD
ALATFSQIVLAVEAIARKHGPDAVGTVGEVTIANPSRNVIPGEVNFTCEFRSPHAEILKALEADFAAAVTEIAAGRKGVT
VEIEQVWRKDPTHFDPKVIGAIREAAEGLGYSNRPMVSGAGHDAFNLATRMPVAMIFVSCKDGLSHNELEDATQADCTAG
ANVLLHTVLSLAGVANAA

Specific function: Involved In The Anaerobic Utilization Of Allantoin. Converts Allantoate To (S)-Ureidoglycolate And Ammonia. [C]

COG id: COG0624

COG function: function code E; Acetylornithine deacetylase/Succinyl-diaminopimelate desuccinylase and related deacylases

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Unknown [C]

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase M20 family [H]

Homologues:

Organism=Escherichia coli, GI1786726, Length=400, Percent_Identity=33.5, Blast_Score=190, Evalue=1e-49,

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR010158
- InterPro:   IPR002933
- InterPro:   IPR011650 [H]

Pfam domain/function: PF07687 M20_dimer; PF01546 Peptidase_M20 [H]

EC number: =3.5.1.87 [H]

Molecular weight: Translated: 44185; Mature: 44054

Theoretical pI: Translated: 4.84; Mature: 4.84

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.4 %Cys     (Translated Protein)
1.9 %Met     (Translated Protein)
3.3 %Cys+Met (Translated Protein)
1.4 %Cys     (Mature Protein)
1.7 %Met     (Mature Protein)
3.1 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEKPSNLPVNSDRLWGTILETAAFGATPKGGVRRLTLSQEDRKVRDWFKAACEAAGCTV
CCCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEE
TVDALGNMFALRPGRDPSRAPIGLGSHLDTQPTGGKFDGILGTLAALEVVRTLNDAGIET
EHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
EAPLCVANWTNEEGSRFAPAMMGSAAFVGDFTVENILGRKDAEGVTVKEALEAIGYVGAA
CCCEEEEECCCCCCCEECHHHHCCCCEECCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC
PVGSQPFEAFVELHIEQGPILEAENKTIGVVEHGQGIVWYDGHITGFESHAGSTPMPLRR
CCCCCHHHHHHHEECCCCCEEECCCCEEEEEECCCEEEEECCEEECCCCCCCCCCCCCHH
DALATFSQIVLAVEAIARKHGPDAVGTVGEVTIANPSRNVIPGEVNFTCEFRSPHAEILK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHH
ALEADFAAAVTEIAAGRKGVTVEIEQVWRKDPTHFDPKVIGAIREAAEGLGYSNRPMVSG
HHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECC
AGHDAFNLATRMPVAMIFVSCKDGLSHNELEDATQADCTAGANVLLHTVLSLAGVANAA
CCCCHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC
>Mature Secondary Structure 
SEKPSNLPVNSDRLWGTILETAAFGATPKGGVRRLTLSQEDRKVRDWFKAACEAAGCTV
CCCCCCCCCCCCHHHHHHHHHHHCCCCCCCCCEEEECCCHHHHHHHHHHHHHHHCCCEE
TVDALGNMFALRPGRDPSRAPIGLGSHLDTQPTGGKFDGILGTLAALEVVRTLNDAGIET
EHHHCCCEEEECCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCC
EAPLCVANWTNEEGSRFAPAMMGSAAFVGDFTVENILGRKDAEGVTVKEALEAIGYVGAA
CCCEEEEECCCCCCCEECHHHHCCCCEECCHHHHHHHCCCCCCCCCHHHHHHHHCCCCCC
PVGSQPFEAFVELHIEQGPILEAENKTIGVVEHGQGIVWYDGHITGFESHAGSTPMPLRR
CCCCCHHHHHHHEECCCCCEEECCCCEEEEEECCCEEEEECCEEECCCCCCCCCCCCCHH
DALATFSQIVLAVEAIARKHGPDAVGTVGEVTIANPSRNVIPGEVNFTCEFRSPHAEILK
HHHHHHHHHHHHHHHHHHHCCCCCCCCCCEEEEECCCCCCCCCCEEEEEEECCCHHHHHH
ALEADFAAAVTEIAAGRKGVTVEIEQVWRKDPTHFDPKVIGAIREAAEGLGYSNRPMVSG
HHHHHHHHHHHHHHCCCCCCEEEHHHHHCCCCCCCCHHHHHHHHHHHHHCCCCCCCEECC
AGHDAFNLATRMPVAMIFVSCKDGLSHNELEDATQADCTAGANVLLHTVLSLAGVANAA
CCCCHHHHHHHCCEEEEEEECCCCCCCCHHHHHHHHHHHHCHHHHHHHHHHHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 9.0

TargetDB status: NA

Availability: NA

References: 9023955; 8285691 [H]