| Definition | Azorhizobium caulinodans ORS 571, complete genome. |
|---|---|
| Accession | NC_009937 |
| Length | 5,369,772 |
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The map label for this gene is catD [H]
Identifier: 158423068
GI number: 158423068
Start: 1644650
End: 1645852
Strand: Reverse
Name: catD [H]
Synonym: AZC_1444
Alternate gene names: 158423068
Gene position: 1645852-1644650 (Counterclockwise)
Preceding gene: 158423070
Following gene: 158423067
Centisome position: 30.65
GC content: 67.5
Gene sequence:
>1203_bases TTGAGCACGGAGGAGCTGCCCGTGCCGTTCATAACCATAAAAGACGTCACGCTTCACTATAAGCTCTCCGGTCCCCGCAA GGGTGCGCCGGTGCTCGTCTTTTCCAATTCGCTCGGCACGGATTTCCGCATCTGGGATGCCGTGGCGCGCGCCTTTGCGC CGAGCCATACGGTCCTGCTCTATGACAAGCGCGGTCATGGTCTGTCCGAACTCGGCACGGCCCCCGCGACCATCGCGAGC CATGCCGCCGATCTTGCCGGACTGATGGATGCACTCGGCCTCGGGCCGGCGGCCATCTGCGGCCTTTCCGTGGGGGGCAT GATCGCGCAGGCGCTCGCCGCTGCACGGCCGGATCTTGTGCGCGCCCTCATCCTCTGCGACACCGCGCCGAAGATCGGCA CGCCCGAGAGCTGGAACACCCGCATCGCCGCCATCGCACAGGACGGCCTCTCCAGCCTCCTTGATCCGGTGATGGAACGC TGGTTCACGCCGGCCTTCCGGCGCGCCGACAATCCAGATTATGCCGGCTATCGCATGATGTTCGCCCGCCAGAGCGGCGA GGGCTATGCGGCCACCTGCGCCGCCATCCGCGACGCCGATCTGACTGAAGAGGCCCGCCGCATTGCCGTAGCGACCCTGT GCGTCGTGGGCGATCAGGACGGCTCGACGCCGCCCGACCTCGTCGCCGCCATGGCCGCGCTCATTCCCGGCGCCCGGTAT GAGGTGATCTCCGGCGCAGGCCATATTCCCTGCGTAGAGCAACCGGCGGCGCTGATCGCGCTGATGCGCGATTTCCTTGC CGGCCTGCGCCCTGCTGCGGACGATCGTTATGCGCAGGGCATGGAGACCCGCCGCGCGGTGCTCGGCGATGCCCATGTGG AGCGGGCCAACGCGCAGACCACCGACTTCGACCGGCCGTTCCAGCAACTCATAACCGAGGGGGCATGGGGCACGGTCTGG TCGCGGGACACGCTCTCGCGCCGCGATCGCTCGCTCCTCACCCTCGCGCTGCTCGCCGCGCTGAACCAGCACGACGAATT TGCCATGCATATACGGGCCACCGCCAATACGGGGGCGACGCGCGAGGACGTGCGCGAGATGCTCCTGCACGTCGCCATCT ATGCCGGCGTGCCCGCCGCCAATCACGCCATCAAGCTCGCCAAGAAGGCGTACGAACAGATGGACGGCGTCGCGGCGGTC TGA
Upstream 100 bases:
>100_bases AGATGGCGGAACTTGATGCGGGGATCGATCATCCACATAACCCTCAGGTTATAGATCGTTCCGGAAATATCATTTTACGC GGGGCCTTCAAACGACGAAA
Downstream 100 bases:
>100_bases CGCCCGGCGTCCCGAGAACAAGACGAAGCGCCACCAAGGCGCCGGAGGGCCCGTCCCGTCCGCCGCCCGTAAGGACGGGA CACAGGAGGTTGAGGAAACG
Product: beta-ketoadipate enol-lactone hydrolase
Products: NA
Alternate protein names: 3-oxoadipate enol-lactonase II; Beta-ketoadipate enol-lactone hydrolase II; Enol-lactone hydrolase II [H]
Number of amino acids: Translated: 400; Mature: 399
Protein sequence:
>400_residues MSTEELPVPFITIKDVTLHYKLSGPRKGAPVLVFSNSLGTDFRIWDAVARAFAPSHTVLLYDKRGHGLSELGTAPATIAS HAADLAGLMDALGLGPAAICGLSVGGMIAQALAAARPDLVRALILCDTAPKIGTPESWNTRIAAIAQDGLSSLLDPVMER WFTPAFRRADNPDYAGYRMMFARQSGEGYAATCAAIRDADLTEEARRIAVATLCVVGDQDGSTPPDLVAAMAALIPGARY EVISGAGHIPCVEQPAALIALMRDFLAGLRPAADDRYAQGMETRRAVLGDAHVERANAQTTDFDRPFQQLITEGAWGTVW SRDTLSRRDRSLLTLALLAALNQHDEFAMHIRATANTGATREDVREMLLHVAIYAGVPAANHAIKLAKKAYEQMDGVAAV
Sequences:
>Translated_400_residues MSTEELPVPFITIKDVTLHYKLSGPRKGAPVLVFSNSLGTDFRIWDAVARAFAPSHTVLLYDKRGHGLSELGTAPATIAS HAADLAGLMDALGLGPAAICGLSVGGMIAQALAAARPDLVRALILCDTAPKIGTPESWNTRIAAIAQDGLSSLLDPVMER WFTPAFRRADNPDYAGYRMMFARQSGEGYAATCAAIRDADLTEEARRIAVATLCVVGDQDGSTPPDLVAAMAALIPGARY EVISGAGHIPCVEQPAALIALMRDFLAGLRPAADDRYAQGMETRRAVLGDAHVERANAQTTDFDRPFQQLITEGAWGTVW SRDTLSRRDRSLLTLALLAALNQHDEFAMHIRATANTGATREDVREMLLHVAIYAGVPAANHAIKLAKKAYEQMDGVAAV >Mature_399_residues STEELPVPFITIKDVTLHYKLSGPRKGAPVLVFSNSLGTDFRIWDAVARAFAPSHTVLLYDKRGHGLSELGTAPATIASH AADLAGLMDALGLGPAAICGLSVGGMIAQALAAARPDLVRALILCDTAPKIGTPESWNTRIAAIAQDGLSSLLDPVMERW FTPAFRRADNPDYAGYRMMFARQSGEGYAATCAAIRDADLTEEARRIAVATLCVVGDQDGSTPPDLVAAMAALIPGARYE VISGAGHIPCVEQPAALIALMRDFLAGLRPAADDRYAQGMETRRAVLGDAHVERANAQTTDFDRPFQQLITEGAWGTVWS RDTLSRRDRSLLTLALLAALNQHDEFAMHIRATANTGATREDVREMLLHVAIYAGVPAANHAIKLAKKAYEQMDGVAAV
Specific function: Not Clear. Seems To Be Implicated In The Early Steps Of Biotin Biosynthesis. [C]
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasm [C]
Metaboloic importance: Non_Essential [C]
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
- InterPro: IPR000073 - InterPro: IPR012790 [H]
Pfam domain/function: PF00561 Abhydrolase_1 [H]
EC number: =3.1.1.24 [H]
Molecular weight: Translated: 42752; Mature: 42621
Theoretical pI: Translated: 6.18; Mature: 6.18
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
1.2 %Cys (Translated Protein) 3.0 %Met (Translated Protein) 4.2 %Cys+Met (Translated Protein) 1.3 %Cys (Mature Protein) 2.8 %Met (Mature Protein) 4.0 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSTEELPVPFITIKDVTLHYKLSGPRKGAPVLVFSNSLGTDFRIWDAVARAFAPSHTVLL CCCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEE YDKRGHGLSELGTAPATIASHAADLAGLMDALGLGPAAICGLSVGGMIAQALAAARPDLV EECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHH RALILCDTAPKIGTPESWNTRIAAIAQDGLSSLLDPVMERWFTPAFRRADNPDYAGYRMM HHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEE FARQSGEGYAATCAAIRDADLTEEARRIAVATLCVVGDQDGSTPPDLVAAMAALIPGARY EEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCCCE EVISGAGHIPCVEQPAALIALMRDFLAGLRPAADDRYAQGMETRRAVLGDAHVERANAQT EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC TDFDRPFQQLITEGAWGTVWSRDTLSRRDRSLLTLALLAALNQHDEFAMHIRATANTGAT CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC REDVREMLLHVAIYAGVPAANHAIKLAKKAYEQMDGVAAV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC >Mature Secondary Structure STEELPVPFITIKDVTLHYKLSGPRKGAPVLVFSNSLGTDFRIWDAVARAFAPSHTVLL CCCCCCCCEEEEEEEEEEEEECCCCCCCCEEEEECCCCCCHHHHHHHHHHHCCCCEEEE YDKRGHGLSELGTAPATIASHAADLAGLMDALGLGPAAICGLSVGGMIAQALAAARPDLV EECCCCCHHHHCCCHHHHHHHHHHHHHHHHHHCCCHHHHHHHHHHHHHHHHHHHCCHHHH RALILCDTAPKIGTPESWNTRIAAIAQDGLSSLLDPVMERWFTPAFRRADNPDYAGYRMM HHHHHHCCCCCCCCCCCCCCEEHHHHHHHHHHHHHHHHHHHCCHHHHCCCCCCCCCEEEE FARQSGEGYAATCAAIRDADLTEEARRIAVATLCVVGDQDGSTPPDLVAAMAALIPGARY EEECCCCCHHHHHHHHHCCCHHHHHHHHHHHHEEEEECCCCCCCHHHHHHHHHHCCCCCE EVISGAGHIPCVEQPAALIALMRDFLAGLRPAADDRYAQGMETRRAVLGDAHVERANAQT EEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCCHHHHHHHHHHHHHHHHHHHHHCCCCC TDFDRPFQQLITEGAWGTVWSRDTLSRRDRSLLTLALLAALNQHDEFAMHIRATANTGAT CCCHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHHHHHHHCCCCCEEEEEEEECCCCCC REDVREMLLHVAIYAGVPAANHAIKLAKKAYEQMDGVAAV HHHHHHHHHHHHHHHCCCCHHHHHHHHHHHHHHHCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 9.0
TargetDB status: NA
Availability: NA
References: 8125318; 670169 [H]