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The map label for this gene is pcaH [H]

Identifier: 158423067

GI number: 158423067

Start: 1643751

End: 1644500

Strand: Reverse

Name: pcaH [H]

Synonym: AZC_1443

Alternate gene names: 158423067

Gene position: 1644500-1643751 (Counterclockwise)

Preceding gene: 158423068

Following gene: 158423066

Centisome position: 30.63

GC content: 64.4

Gene sequence:

>750_bases
ATGTCAGAACAGTCCAACCGCAGACCAGAAACGGGCGCCTTCTTCGCGCGTGACAGGGCCTGGCACGCGCCGGCCTACAC
GCCCACCTACAAGACCTCCGTGCTGCGCTCGCCGCAGCGCGCGCTGCTGTCGCTCGACGGCACGCTGTCGGAAACGACCG
GCCCGGTGTTCGGCCATTCGCTGCTCGGCGCGCTGGATAACGACCTCATCCACAATTATGCGCGGCCCGGCGAGAGCGCC
ATTGGCGAACGCATCATCGTCCATGGCCGGGTGCTGGACGAGCGTGCGCGGCCGGTGGCCGGTGCGCTGGTGGAGTTCTG
GCAGGCGAATGCGGGCGGGCGCTACCGCCACAAGAAGGAAACCTATCTCGCCGCCATCGATCCCAATTTCGGCGGCTGCG
GGCGCGCCATTACAGATGAGGATGGCCGGTACTTCTTCCGCACCATCAAGCCCGGCCCCTATCCCTGGCCGAATGGAGTG
AATGACTGGCGCCCGGCCCACATCCATTTCTCCATCTTCGGCCACGGCTTCGCCCAGCGGCTCATCACCCAGATGTATTT
CGAGGGCGACCCGATGATCTGGAAATGCCCGATCGTGAACACCATTCCCGACAAGGCCGCCATTGAGCAGCTGATCGCGC
CGCTCGACTGGGGCAACACCATTCCCATGGATGCACGTGCCTACAAGTTCGACATCGTGCTGCGTGGCCGCCGCTCGACC
ATGTTCGAGAACCGGATGGAGGGCAACTGA

Upstream 100 bases:

>100_bases
CCCGTCCCGTCCGCCGCCCGTAAGGACGGGACACAGGAGGTTGAGGAAACGATCGCCCGCTCAGCCGCACGGCCGAGAGC
GGGCCCAATCGAGGTTCGCC

Downstream 100 bases:

>100_bases
TGGTCCAGAACCTCGGTTATCTGAAGGAAACGCCCTCCCAGACGGCGGGACCTTATGTCCACATCGGCCTCACGCCGAAT
TTCTGCGGCATCGAGGGCAT

Product: protocatechuate 3,4-dioxygenase beta chain protein

Products: NA

Alternate protein names: 3,4-PCD [H]

Number of amino acids: Translated: 249; Mature: 248

Protein sequence:

>249_residues
MSEQSNRRPETGAFFARDRAWHAPAYTPTYKTSVLRSPQRALLSLDGTLSETTGPVFGHSLLGALDNDLIHNYARPGESA
IGERIIVHGRVLDERARPVAGALVEFWQANAGGRYRHKKETYLAAIDPNFGGCGRAITDEDGRYFFRTIKPGPYPWPNGV
NDWRPAHIHFSIFGHGFAQRLITQMYFEGDPMIWKCPIVNTIPDKAAIEQLIAPLDWGNTIPMDARAYKFDIVLRGRRST
MFENRMEGN

Sequences:

>Translated_249_residues
MSEQSNRRPETGAFFARDRAWHAPAYTPTYKTSVLRSPQRALLSLDGTLSETTGPVFGHSLLGALDNDLIHNYARPGESA
IGERIIVHGRVLDERARPVAGALVEFWQANAGGRYRHKKETYLAAIDPNFGGCGRAITDEDGRYFFRTIKPGPYPWPNGV
NDWRPAHIHFSIFGHGFAQRLITQMYFEGDPMIWKCPIVNTIPDKAAIEQLIAPLDWGNTIPMDARAYKFDIVLRGRRST
MFENRMEGN
>Mature_248_residues
SEQSNRRPETGAFFARDRAWHAPAYTPTYKTSVLRSPQRALLSLDGTLSETTGPVFGHSLLGALDNDLIHNYARPGESAI
GERIIVHGRVLDERARPVAGALVEFWQANAGGRYRHKKETYLAAIDPNFGGCGRAITDEDGRYFFRTIKPGPYPWPNGVN
DWRPAHIHFSIFGHGFAQRLITQMYFEGDPMIWKCPIVNTIPDKAAIEQLIAPLDWGNTIPMDARAYKFDIVLRGRRSTM
FENRMEGN

Specific function: Plays an essential role in the utilization of numerous aromatic and hydroaromatic compounds via the beta-ketoadipate pathway [H]

COG id: COG3485

COG function: function code Q; Protocatechuate 3,4-dioxygenase beta subunit

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the intradiol ring-cleavage dioxygenase family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000627
- InterPro:   IPR015889
- InterPro:   IPR012785 [H]

Pfam domain/function: PF00775 Dioxygenase_C [H]

EC number: =1.13.11.3 [H]

Molecular weight: Translated: 28090; Mature: 27959

Theoretical pI: Translated: 9.00; Mature: 9.00

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

0.8 %Cys     (Translated Protein)
2.4 %Met     (Translated Protein)
3.2 %Cys+Met (Translated Protein)
0.8 %Cys     (Mature Protein)
2.0 %Met     (Mature Protein)
2.8 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MSEQSNRRPETGAFFARDRAWHAPAYTPTYKTSVLRSPQRALLSLDGTLSETTGPVFGHS
CCCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCHHHHHEECCCCCCCCCCCHHHHH
LLGALDNDLIHNYARPGESAIGERIIVHGRVLDERARPVAGALVEFWQANAGGRYRHKKE
HHHHHHHHHHHHHCCCCHHHHCCEEEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC
TYLAAIDPNFGGCGRAITDEDGRYFFRTIKPGPYPWPNGVNDWRPAHIHFSIFGHGFAQR
EEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCHHHHH
LITQMYFEGDPMIWKCPIVNTIPDKAAIEQLIAPLDWGNTIPMDARAYKFDIVLRGRRST
HHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCHHH
MFENRMEGN
HHHHHCCCC
>Mature Secondary Structure 
SEQSNRRPETGAFFARDRAWHAPAYTPTYKTSVLRSPQRALLSLDGTLSETTGPVFGHS
CCCCCCCCCCCCEEECCCCCCCCCCCCCHHHHHHCCHHHHHEECCCCCCCCCCCHHHHH
LLGALDNDLIHNYARPGESAIGERIIVHGRVLDERARPVAGALVEFWQANAGGRYRHKKE
HHHHHHHHHHHHHCCCCHHHHCCEEEEECCHHHHHCCHHHHHHHHHHHCCCCCCCCCCCC
TYLAAIDPNFGGCGRAITDEDGRYFFRTIKPGPYPWPNGVNDWRPAHIHFSIFGHGFAQR
EEEEEECCCCCCCCCCCCCCCCCEEEEEECCCCCCCCCCCCCCCCEEEEEEEECCHHHHH
LITQMYFEGDPMIWKCPIVNTIPDKAAIEQLIAPLDWGNTIPMDARAYKFDIVLRGRRST
HHHHHHCCCCCCEEECCCCCCCCCHHHHHHHHCCCCCCCCCCCCCCEEEEEEEEECCHHH
MFENRMEGN
HHHHHCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 8407791; 115853; 3194022; 7990141; 9254599; 9254600; 9298971 [H]