| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
Click here to switch to the map view.
The map label for this gene is Not Available
Identifier: 15834906
GI number: 15834906
Start: 342062
End: 342580
Strand: Reverse
Name: Not Available
Synonym: TC0286
Alternate gene names: NA
Gene position: 342580-342062 (Counterclockwise)
Preceding gene: 15834909
Following gene: 15834903
Centisome position: 31.93
GC content: 45.28
Gene sequence:
>519_bases TTGTTCATGTACATTTTTTCTAGCTCTTTCTTTTTCATGCAGCATGCCCATAATGCTGACACCTTTCCGGCGTGGGATTG CTTGCAACGCAACTATCTTCATCGCGATAGGATAACCTCTTTCTGCAGCTATGTTCCTGTTTTGAGCACCGTTGTAGGAA TACGCACTTTGTGCAACATGCGCAGATTAGAGAAGGAACTAACAGAGAGAACCGGGGGATTCCTTTGCAAAAACGATCCC ACCATCCCCTGCTCCTGGTTCCCGTGCTCAATTATTAGAAAAGAATGGCCGAAAGCCCGAGCAACGGCCATACAAGAAGT GTTGGGAATTAAAGCGCTTGTTTCTCTTGGAGCTCTTCTCTTGAAGGTCTTCCGAGCAGTCAAAACGTTTTTCTACAAAA ACTTCTCTTTTGCCCTTGCTATTCCAAGTAACAGAGATTCTATTGGCTCGCCGGGATACCCCCCTTCGGCTATACCTTTT CCTAAACACCACTTTGTTGAAACACCAAACAGCTTTTGA
Upstream 100 bases:
>100_bases ATTTTTGGTACAATTCATCCCTAGCTTTTAATAATTCTTTCAAAATTGTTCACATCTCTCCCTTCATTCAGAAAGCTAAA AACCCAATTTTTAGGGAGTA
Downstream 100 bases:
>100_bases ATAACTCAAAAAGCCTTGCTTCTTAGAAAAAGCAAGGCTTTCTTAGCTCAATCAAGCGCCCTCTTTTATCGACAAAACAA TATAGGCAGGAAAGGCAAAG
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 172; Mature: 172
Protein sequence:
>172_residues MFMYIFSSSFFFMQHAHNADTFPAWDCLQRNYLHRDRITSFCSYVPVLSTVVGIRTLCNMRRLEKELTERTGGFLCKNDP TIPCSWFPCSIIRKEWPKARATAIQEVLGIKALVSLGALLLKVFRAVKTFFYKNFSFALAIPSNRDSIGSPGYPPSAIPF PKHHFVETPNSF
Sequences:
>Translated_172_residues MFMYIFSSSFFFMQHAHNADTFPAWDCLQRNYLHRDRITSFCSYVPVLSTVVGIRTLCNMRRLEKELTERTGGFLCKNDP TIPCSWFPCSIIRKEWPKARATAIQEVLGIKALVSLGALLLKVFRAVKTFFYKNFSFALAIPSNRDSIGSPGYPPSAIPF PKHHFVETPNSF >Mature_172_residues MFMYIFSSSFFFMQHAHNADTFPAWDCLQRNYLHRDRITSFCSYVPVLSTVVGIRTLCNMRRLEKELTERTGGFLCKNDP TIPCSWFPCSIIRKEWPKARATAIQEVLGIKALVSLGALLLKVFRAVKTFFYKNFSFALAIPSNRDSIGSPGYPPSAIPF PKHHFVETPNSF
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 19682; Mature: 19682
Theoretical pI: Translated: 9.77; Mature: 9.77
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
3.5 %Cys (Translated Protein) 2.3 %Met (Translated Protein) 5.8 %Cys+Met (Translated Protein) 3.5 %Cys (Mature Protein) 2.3 %Met (Mature Protein) 5.8 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MFMYIFSSSFFFMQHAHNADTFPAWDCLQRNYLHRDRITSFCSYVPVLSTVVGIRTLCNM CEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLEKELTERTGGFLCKNDPTIPCSWFPCSIIRKEWPKARATAIQEVLGIKALVSLGALL HHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LKVFRAVKTFFYKNFSFALAIPSNRDSIGSPGYPPSAIPFPKHHFVETPNSF HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC >Mature Secondary Structure MFMYIFSSSFFFMQHAHNADTFPAWDCLQRNYLHRDRITSFCSYVPVLSTVVGIRTLCNM CEEEEECCCHHHHHHCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH RRLEKELTERTGGFLCKNDPTIPCSWFPCSIIRKEWPKARATAIQEVLGIKALVSLGALL HHHHHHHHHHHCCEEECCCCCCCCCCCCHHHHHHHCCHHHHHHHHHHHHHHHHHHHHHHH LKVFRAVKTFFYKNFSFALAIPSNRDSIGSPGYPPSAIPFPKHHFVETPNSF HHHHHHHHHHHHCCCEEEEEECCCCCCCCCCCCCCCCCCCCCCCCCCCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA