Click here to switch to the map view.

The map label for this gene is Not Available

Identifier: 15834878

GI number: 15834878

Start: 301918

End: 302925

Strand: Reverse

Name: Not Available

Synonym: TC0258

Alternate gene names: 15834878

Gene position: 302925-301918 (Counterclockwise)

Preceding gene: 15834879

Following gene: 15834875

Centisome position: 28.23

GC content: 42.46

Gene sequence:

>1008_bases
ATGAACATAACGAATAACCCACCACCAACCACTTCTTCCTTGGCTCCCTTTATAACCTCAGACTCTAGCAATCTTTCCAC
CACCCCCCAATCTTTTAAAGAGGCTTCTTTAGTGGACAAGGTTATTAGAGTATTGTTGGTTCTCTTCCTTATTATATTCT
CTTGCGGACTCATCCTCTGTGCGTACTCATTCCGAGATCTTTTAGACATAGACACCGCAACGCAAGCCCCTTCTGGACCT
GCAGATAGACTCCTAGCTCATGTTGAGGATGCTTTATCTGGTCCTGTTCCTACTTGGGATAATGAACACCTATTCCAACA
CTCTTGCCTAATGTACGAAAAATACGGAACCGTTCTCCCATTGAATATCTTCGCCCCACTTACTAAATTCAATTGTGTCG
AACATATTTGTAACTGCCTACTTGCCAAACAAATCCTCGAACAATGTGGAGAATGTGATCTTCCTTGTCCTCCTACCTGT
ACACCAGAAAATTACTACCAACTTTTAAGAGAAGCCTGTGTCTTCCCATTCATCTTATGGCATGATCCTCACGCACATAC
ACAAGAAGCTATGTTAGCAAAAATGGAACAAAACATACGCTCTGGACGAGTTGGAAATAGCCACTGGGCATTAATCATTG
TAGATATATGCCGAAGATGTGTCACATATTTTGATAGCCTTTACGACTTTGTATGGCATCCTGAACAAACCCAAGCACAA
CTAAACGAGCTAGCTTCTGCTCTCGGGAATATCTATCCAGAAGGAGAATCTAATACTCCTTTCCAAACCTGCATCGGATC
AACATTCCAAGTACAACCCCTAGGAGAATTAAGCTGTGGTGTTTGGTGCTGCCAATTCTTAGAGTGGTACCTTGAAAATC
CGGATTTCTCTCTCGAAGATAAAGTCCCCGTAAGCGTATGCGATAGAAAATCTATGCTCACTAGATTTTGCGCTGCATCC
CAAGCATCCATGTCCAAATATTCCGCTTTAAACTGGCCATCACATTAA

Upstream 100 bases:

>100_bases
TTCTCTGATCTTGCCTGGCCTTCTTTATAATTTCTTTGAATAGCAAAATCCTTTCTATTCATTTATAATGGTTGTCGTAT
AACAAAATAACCTTCTTATT

Downstream 100 bases:

>100_bases
CATTATTGTAGTGTTACAGAAAAAATGAGCGTTGCTGACGGAGGCATCTCGATATCTAATCCCCAAGCAACGCTACCATC
ATCATCCAGAGGAGCTAGTT

Product: hypothetical protein

Products: NA

Alternate protein names: ChlaDub2 [H]

Number of amino acids: Translated: 335; Mature: 335

Protein sequence:

>335_residues
MNITNNPPPTTSSLAPFITSDSSNLSTTPQSFKEASLVDKVIRVLLVLFLIIFSCGLILCAYSFRDLLDIDTATQAPSGP
ADRLLAHVEDALSGPVPTWDNEHLFQHSCLMYEKYGTVLPLNIFAPLTKFNCVEHICNCLLAKQILEQCGECDLPCPPTC
TPENYYQLLREACVFPFILWHDPHAHTQEAMLAKMEQNIRSGRVGNSHWALIIVDICRRCVTYFDSLYDFVWHPEQTQAQ
LNELASALGNIYPEGESNTPFQTCIGSTFQVQPLGELSCGVWCCQFLEWYLENPDFSLEDKVPVSVCDRKSMLTRFCAAS
QASMSKYSALNWPSH

Sequences:

>Translated_335_residues
MNITNNPPPTTSSLAPFITSDSSNLSTTPQSFKEASLVDKVIRVLLVLFLIIFSCGLILCAYSFRDLLDIDTATQAPSGP
ADRLLAHVEDALSGPVPTWDNEHLFQHSCLMYEKYGTVLPLNIFAPLTKFNCVEHICNCLLAKQILEQCGECDLPCPPTC
TPENYYQLLREACVFPFILWHDPHAHTQEAMLAKMEQNIRSGRVGNSHWALIIVDICRRCVTYFDSLYDFVWHPEQTQAQ
LNELASALGNIYPEGESNTPFQTCIGSTFQVQPLGELSCGVWCCQFLEWYLENPDFSLEDKVPVSVCDRKSMLTRFCAAS
QASMSKYSALNWPSH
>Mature_335_residues
MNITNNPPPTTSSLAPFITSDSSNLSTTPQSFKEASLVDKVIRVLLVLFLIIFSCGLILCAYSFRDLLDIDTATQAPSGP
ADRLLAHVEDALSGPVPTWDNEHLFQHSCLMYEKYGTVLPLNIFAPLTKFNCVEHICNCLLAKQILEQCGECDLPCPPTC
TPENYYQLLREACVFPFILWHDPHAHTQEAMLAKMEQNIRSGRVGNSHWALIIVDICRRCVTYFDSLYDFVWHPEQTQAQ
LNELASALGNIYPEGESNTPFQTCIGSTFQVQPLGELSCGVWCCQFLEWYLENPDFSLEDKVPVSVCDRKSMLTRFCAAS
QASMSKYSALNWPSH

Specific function: Effector proteins function to alter host cell physiology and promote bacterial survival in host tissues. This protease possesses deubiquitinating and deneddylating activities [H]

COG id: NA

COG function: NA

Gene ontology:

Cell location: Secreted. Host cell (By similarity). Membrane; Single-pass membrane protein (By similarity). Note=Secreted, and delivered into the host cell (By similarity) [H]

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: Belongs to the peptidase C48 family [H]

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR003653 [H]

Pfam domain/function: PF02902 Peptidase_C48 [H]

EC number: NA

Molecular weight: Translated: 37620; Mature: 37620

Theoretical pI: Translated: 4.69; Mature: 4.69

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

5.7 %Cys     (Translated Protein)
1.8 %Met     (Translated Protein)
7.5 %Cys+Met (Translated Protein)
5.7 %Cys     (Mature Protein)
1.8 %Met     (Mature Protein)
7.5 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MNITNNPPPTTSSLAPFITSDSSNLSTTPQSFKEASLVDKVIRVLLVLFLIIFSCGLILC
CCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYSFRDLLDIDTATQAPSGPADRLLAHVEDALSGPVPTWDNEHLFQHSCLMYEKYGTVLP
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEE
LNIFAPLTKFNCVEHICNCLLAKQILEQCGECDLPCPPTCTPENYYQLLREACVFPFILW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEE
HDPHAHTQEAMLAKMEQNIRSGRVGNSHWALIIVDICRRCVTYFDSLYDFVWHPEQTQAQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LNELASALGNIYPEGESNTPFQTCIGSTFQVQPLGELSCGVWCCQFLEWYLENPDFSLED
HHHHHHHHHCCCCCCCCCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCC
KVPVSVCDRKSMLTRFCAASQASMSKYSALNWPSH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC
>Mature Secondary Structure
MNITNNPPPTTSSLAPFITSDSSNLSTTPQSFKEASLVDKVIRVLLVLFLIIFSCGLILC
CCCCCCCCCCCCCCCCCEECCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHHH
AYSFRDLLDIDTATQAPSGPADRLLAHVEDALSGPVPTWDNEHLFQHSCLMYEKYGTVLP
HHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHHCCCCCCCCCCHHHHHHHHHHHHCCCEEE
LNIFAPLTKFNCVEHICNCLLAKQILEQCGECDLPCPPTCTPENYYQLLREACVFPFILW
HHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHEE
HDPHAHTQEAMLAKMEQNIRSGRVGNSHWALIIVDICRRCVTYFDSLYDFVWHPEQTQAQ
CCCCCHHHHHHHHHHHHHHHHCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHCCCCHHHHH
LNELASALGNIYPEGESNTPFQTCIGSTFQVQPLGELSCGVWCCQFLEWYLENPDFSLED
HHHHHHHHHCCCCCCCCCCCHHHHCCCCEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCC
KVPVSVCDRKSMLTRFCAASQASMSKYSALNWPSH
CCCHHHHHHHHHHHHHHHHHHHHHHHHHCCCCCCC

PDB accession: NA

Resolution: NA

Structure class: Alpha

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 7.0

TargetDB status: NA

Availability: NA

References: NA