| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834857
GI number: 15834857
Start: 277179
End: 277658
Strand: Reverse
Name: Not Available
Synonym: TC0237
Alternate gene names: NA
Gene position: 277658-277179 (Counterclockwise)
Preceding gene: 161579048
Following gene: 15834856
Centisome position: 25.88
GC content: 40.42
Gene sequence:
>480_bases ATGTCAGCACCTATCCCACCAGCAAAAGACTCAAAATACGTCTCTGCTTTACCTCCATTAGAACCACTGAGAACCCCTCC AATGGCGGAACTCTTATTCGGTATTTATTCGCTTCTTTTAGAGGCTGTAGAAATACGTCAGCAAACGGTTCTTACACAGT CTCAACAACTCAACGACAATACTAATATCCAACAACAATTAAACCAAGAAACTAATCGCATTAAATACGCCGTTGTTAAT GCTGGAGCCAAAGAGGACGAAATCACACGGGTACAAAACCAAAACCAAAACTATTCTGCGCAAAGATCTAACATTCAGGA CCAATTAGTAACCGCCCGACAAAACGGACAAATTATTCTTTCCCATGCCTCCACAAACATCAATATCATGCAACAAATCG CACAAATGAACTCTTCTTTCATCAAAACTTTGAACTCCGTAGGTAGCACAGTTAACCAGTTAAACAAACCCCTGTCTTAA
Upstream 100 bases:
>100_bases GGGTTAAATAATAAGCATACTTTTAAAACAAAATATTATTTTTATTAAAGGGAGAAATTACTGGTAAAATAAAAAATAAA AACAAAAAAAATTTTAGAAT
Downstream 100 bases:
>100_bases CCCCCTAGACTAATTTGAGGCAAAAAATATGTGGTTTCATCCTCAAGAATCAGTGAAAGCCGCTGTACAATTACCCGAAA CTCCTCCGGTTACAGGAACA
Product: hypothetical protein
Products: NA
Alternate protein names: None
Number of amino acids: Translated: 159; Mature: 158
Protein sequence:
>159_residues MSAPIPPAKDSKYVSALPPLEPLRTPPMAELLFGIYSLLLEAVEIRQQTVLTQSQQLNDNTNIQQQLNQETNRIKYAVVN AGAKEDEITRVQNQNQNYSAQRSNIQDQLVTARQNGQIILSHASTNINIMQQIAQMNSSFIKTLNSVGSTVNQLNKPLS
Sequences:
>Translated_159_residues MSAPIPPAKDSKYVSALPPLEPLRTPPMAELLFGIYSLLLEAVEIRQQTVLTQSQQLNDNTNIQQQLNQETNRIKYAVVN AGAKEDEITRVQNQNQNYSAQRSNIQDQLVTARQNGQIILSHASTNINIMQQIAQMNSSFIKTLNSVGSTVNQLNKPLS >Mature_158_residues SAPIPPAKDSKYVSALPPLEPLRTPPMAELLFGIYSLLLEAVEIRQQTVLTQSQQLNDNTNIQQQLNQETNRIKYAVVNA GAKEDEITRVQNQNQNYSAQRSNIQDQLVTARQNGQIILSHASTNINIMQQIAQMNSSFIKTLNSVGSTVNQLNKPLS
Specific function: Unknown
COG id: NA
COG function: NA
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 17687; Mature: 17556
Theoretical pI: Translated: 8.92; Mature: 8.92
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
0.0 %Cys (Translated Protein) 2.5 %Met (Translated Protein) 2.5 %Cys+Met (Translated Protein) 0.0 %Cys (Mature Protein) 1.9 %Met (Mature Protein) 1.9 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MSAPIPPAKDSKYVSALPPLEPLRTPPMAELLFGIYSLLLEAVEIRQQTVLTQSQQLNDN CCCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TNIQQQLNQETNRIKYAVVNAGAKEDEITRVQNQNQNYSAQRSNIQDQLVTARQNGQIIL CHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEE SHASTNINIMQQIAQMNSSFIKTLNSVGSTVNQLNKPLS EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC >Mature Secondary Structure SAPIPPAKDSKYVSALPPLEPLRTPPMAELLFGIYSLLLEAVEIRQQTVLTQSQQLNDN CCCCCCCCCCCCCCCCCCCCCCCCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCC TNIQQQLNQETNRIKYAVVNAGAKEDEITRVQNQNQNYSAQRSNIQDQLVTARQNGQIIL CHHHHHHHHHHHHEEEEEEECCCCHHHHHHHHCCCCCCHHHHHHHHHHHHHHCCCCCEEE SHASTNINIMQQIAQMNSSFIKTLNSVGSTVNQLNKPLS EECCCCHHHHHHHHHHHHHHHHHHHHHHHHHHHHCCCCC
PDB accession: NA
Resolution: NA
Structure class: Unstructured
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA