| Definition | Chlamydia muridarum Nigg, complete genome. |
|---|---|
| Accession | NC_002620 |
| Length | 1,072,950 |
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Identifier: 15834755
GI number: 15834755
Start: 164975
End: 165847
Strand: Reverse
Name: Not Available
Synonym: TC0135
Alternate gene names: NA
Gene position: 165847-164975 (Counterclockwise)
Preceding gene: 15834756
Following gene: 15834754
Centisome position: 15.46
GC content: 41.35
Gene sequence:
>873_bases ATGCAAGAAAAACCCTCGACTGTCTTTAGACTGATCCATTGCTCCGATATCCATTTTTGTGTACTCCCTAAAAATCCTTT TCAATGCTTCAATAAACGTTTCAAAGGATTACTAAGGCAGCTTGTAGGAGGGGTGTCCTTTCGAGCCCCCGCAATCTCCC AGCGGTTCCCCCAACTTGTCGCTCAACTCGAAGCAAATGGAGTCTGCGTAACTGGAGATGTTACCATTACCGCTCTTGAT TCAGAATTCCGCTTAGCTAAAGAATTTCTCTCTCGCATTGAATCCATTGCCCCTGTGTATATAGTTCCAGGAAACCATGA CGTATACACTTATCGAGCATTAAAGAAACAAACCTTCTATTCTTATTTCCCTAATAAAGAACTCCAAACGCATCGCATAG CCTTTCAGAAACTCACCCCTAACTGGTGGTTAGTTCTATTAGACTGTTCTTGCTTTAACGGTTGGTGTGCAGCAAATGGA GAAGTAACTGATTCTCAAATCGTTGCTTTAGAGCAATTTCTTGCTTCTCTTCCCTCTTTGGAACACGTGATCGTAGCAAA TCACTATCCCTTATCTCCCACAACAAGGCCTGCTCACGATTTACTAAATTACGCTCCTCTAAAATCTTTATTAATGAATT CCCCTTCTGTACGGATGTACCTACATGGACACGATCATCATGTAGAAATTGATCATCTTCCGCCTTTGGTTGTAAATAGC GGATCATTAACGCTGCCTTCGAATGCACGCTTTCATATTATAGATCTGTATCCAGAGGGGGAATACCGAATTTCTACTGC ATCGCTAACCAACCTAACAGAAACAGACTCCCCATTAAAAATTTCTATTGAAGAAACCTCAATCTCTTTATAA
Upstream 100 bases:
>100_bases AACGATAAAAAAACTTAATTTTTACTAACTATCCGCCTATTATGCCGAGAACGAGACCTATTAATAATCCAGTCGCTGTT CCTAAAACCTTCACCTCTCT
Downstream 100 bases:
>100_bases GCCCTTTGTACTGAAGTTTAAAACCACGAACCTGGAAATCTCACTATGAAAGAAAAAAAAGTACTAGAATTGTCGCCAGA ATCCGCCCTGTTGAAAAAAC
Product: icc-related protein
Products: NA
Alternate protein names: Metallophosphoesterase; Metallo-Phosphoesterase; Icc-Related Protein; Metallo-Dependent Phosphatase; 3 5-Cyclic-Nucleotide Phosphodiesterase
Number of amino acids: Translated: 290; Mature: 290
Protein sequence:
>290_residues MQEKPSTVFRLIHCSDIHFCVLPKNPFQCFNKRFKGLLRQLVGGVSFRAPAISQRFPQLVAQLEANGVCVTGDVTITALD SEFRLAKEFLSRIESIAPVYIVPGNHDVYTYRALKKQTFYSYFPNKELQTHRIAFQKLTPNWWLVLLDCSCFNGWCAANG EVTDSQIVALEQFLASLPSLEHVIVANHYPLSPTTRPAHDLLNYAPLKSLLMNSPSVRMYLHGHDHHVEIDHLPPLVVNS GSLTLPSNARFHIIDLYPEGEYRISTASLTNLTETDSPLKISIEETSISL
Sequences:
>Translated_290_residues MQEKPSTVFRLIHCSDIHFCVLPKNPFQCFNKRFKGLLRQLVGGVSFRAPAISQRFPQLVAQLEANGVCVTGDVTITALD SEFRLAKEFLSRIESIAPVYIVPGNHDVYTYRALKKQTFYSYFPNKELQTHRIAFQKLTPNWWLVLLDCSCFNGWCAANG EVTDSQIVALEQFLASLPSLEHVIVANHYPLSPTTRPAHDLLNYAPLKSLLMNSPSVRMYLHGHDHHVEIDHLPPLVVNS GSLTLPSNARFHIIDLYPEGEYRISTASLTNLTETDSPLKISIEETSISL >Mature_290_residues MQEKPSTVFRLIHCSDIHFCVLPKNPFQCFNKRFKGLLRQLVGGVSFRAPAISQRFPQLVAQLEANGVCVTGDVTITALD SEFRLAKEFLSRIESIAPVYIVPGNHDVYTYRALKKQTFYSYFPNKELQTHRIAFQKLTPNWWLVLLDCSCFNGWCAANG EVTDSQIVALEQFLASLPSLEHVIVANHYPLSPTTRPAHDLLNYAPLKSLLMNSPSVRMYLHGHDHHVEIDHLPPLVVNS GSLTLPSNARFHIIDLYPEGEYRISTASLTNLTETDSPLKISIEETSISL
Specific function: Unknown
COG id: COG1409
COG function: function code R; Predicted phosphohydrolases
Gene ontology:
Cell location: Cytoplasmic
Metaboloic importance: NA
Operon status: Not Known
Operon components: None
Similarity: NA
Homologues:
None
Paralogues:
None
Copy number: NA
Swissprot (AC and ID): NA
Other databases:
NA
Pfam domain/function: NA
EC number: NA
Molecular weight: Translated: 32690; Mature: 32690
Theoretical pI: Translated: 7.16; Mature: 7.16
Prosite motif: NA
Important sites: NA
Signals:
None
Transmembrane regions:
None
Cys/Met content:
2.4 %Cys (Translated Protein) 1.0 %Met (Translated Protein) 3.4 %Cys+Met (Translated Protein) 2.4 %Cys (Mature Protein) 1.0 %Met (Mature Protein) 3.4 %Cys+Met (Mature Protein)
Secondary structure:
>Translated Secondary Structure MQEKPSTVFRLIHCSDIHFCVLPKNPFQCFNKRFKGLLRQLVGGVSFRAPAISQRFPQLV CCCCCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AQLEANGVCVTGDVTITALDSEFRLAKEFLSRIESIAPVYIVPGNHDVYTYRALKKQTFY HHHCCCCEEEECCEEEEEECHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEHHHHHHHHH SYFPNKELQTHRIAFQKLTPNWWLVLLDCSCFNGWCAANGEVTDSQIVALEQFLASLPSL HHCCCCCCHHHHEEEEEECCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCC EHVIVANHYPLSPTTRPAHDLLNYAPLKSLLMNSPSVRMYLHGHDHHVEIDHLPPLVVNS CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCEEECC GSLTLPSNARFHIIDLYPEGEYRISTASLTNLTETDSPLKISIEETSISL CCEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCEECC >Mature Secondary Structure MQEKPSTVFRLIHCSDIHFCVLPKNPFQCFNKRFKGLLRQLVGGVSFRAPAISQRFPQLV CCCCCCCEEEEEEECCEEEEEECCCHHHHHHHHHHHHHHHHHCCCCCCCCHHHHHHHHHH AQLEANGVCVTGDVTITALDSEFRLAKEFLSRIESIAPVYIVPGNHDVYTYRALKKQTFY HHHCCCCEEEECCEEEEEECHHHHHHHHHHHHHHHCCCEEEECCCCCEEEEHHHHHHHHH SYFPNKELQTHRIAFQKLTPNWWLVLLDCSCFNGWCAANGEVTDSQIVALEQFLASLPSL HHCCCCCCHHHHEEEEEECCCEEEEEEEECCCCCEEECCCCCCHHHHHHHHHHHHHCCCC EHVIVANHYPLSPTTRPAHDLLNYAPLKSLLMNSPSVRMYLHGHDHHVEIDHLPPLVVNS CEEEEECCCCCCCCCCCHHHHHHHHHHHHHHCCCCCEEEEEECCCCEEEECCCCCEEECC GSLTLPSNARFHIIDLYPEGEYRISTASLTNLTETDSPLKISIEETSISL CCEECCCCCCEEEEEECCCCCEEEEEEEECCCCCCCCCEEEEEECCEECC
PDB accession: NA
Resolution: NA
Structure class: Alpha Beta
Cofactors: NA
Metal ions: NA
Kcat value (1/min): NA
Specific activity: NA
Km value (mM): NA
Substrates: NA
Specific reaction: NA
General reaction: NA
Inhibitor: NA
Structure determination priority: 10.0
TargetDB status: NA
Availability: NA
References: NA