Definition Acaryochloris marina MBIC11017 plasmid pREB3, complete sequence.
Accession NC_009928
Length 273,121

Click here to switch to the map view.

The map label for this gene is 158340381

Identifier: 158340381

GI number: 158340381

Start: 219439

End: 219891

Strand: Direct

Name: 158340381

Synonym: AM1_C0308

Alternate gene names: NA

Gene position: 219439-219891 (Clockwise)

Preceding gene: 158340379

Following gene: 158340386

Centisome position: 80.34

GC content: 42.38

Gene sequence:

>453_bases
ATGCACTATGCTATGTTGTTCCTTGAGCAAGGGACAAATGAATTTCATTGTCAAAGGCAGTTTTCAGGTATGGGAATCGC
CTTTTTCAAGAAATACCTCGGTAGCTCTATGACCTGGAATGTTGGGAATCCACCTAGTAAGGGAACCCTGAGCACATGTC
TTATTCATCAGGTTTCTAAAGGTAGCTTTCTGAGTGAGCTGCCTTTTTTATGGCTTAAATCGCCCTCAGAGCATTTAGGC
TGTGTTAAATTCACAAGTAATTATGAATGGCAATTATTGCTGGGCAATCTCAATCACCACAGGCTGCCCTTTCCCTATCC
AAAGGGAGTCCAAGACCTTTACCCCAGCTTTGTCATTATTTATCTTAATCAGGGTATCCTCACCTTTAGAAATGTGAGAG
AGGCTATCCACTCTCACAGCCTTTTCAGAACAGATTTTAGACAGCTTCGGTAG

Upstream 100 bases:

>100_bases
TCCTATTACTTCGATTGACTCAAGACCGCCCTATCTGCAAGCTTCTTTGTGCTTCAACTCCAAGTAGGACTTAATGACAT
CGCCGTGGCAGGCCAGGGGA

Downstream 100 bases:

>100_bases
CAAGAAGCTGTCTTTTTTAATCTAGCCTCATCACTTTCCCTCACTCGCTGATTTACAGCGGATATTCTTAGAGCCTTCTA
GCAGTTAAACATGACCACAA

Product: hypothetical protein

Products: NA

Alternate protein names: NA

Number of amino acids: Translated: 150; Mature: 150

Protein sequence:

>150_residues
MHYAMLFLEQGTNEFHCQRQFSGMGIAFFKKYLGSSMTWNVGNPPSKGTLSTCLIHQVSKGSFLSELPFLWLKSPSEHLG
CVKFTSNYEWQLLLGNLNHHRLPFPYPKGVQDLYPSFVIIYLNQGILTFRNVREAIHSHSLFRTDFRQLR

Sequences:

>Translated_150_residues
MHYAMLFLEQGTNEFHCQRQFSGMGIAFFKKYLGSSMTWNVGNPPSKGTLSTCLIHQVSKGSFLSELPFLWLKSPSEHLG
CVKFTSNYEWQLLLGNLNHHRLPFPYPKGVQDLYPSFVIIYLNQGILTFRNVREAIHSHSLFRTDFRQLR
>Mature_150_residues
MHYAMLFLEQGTNEFHCQRQFSGMGIAFFKKYLGSSMTWNVGNPPSKGTLSTCLIHQVSKGSFLSELPFLWLKSPSEHLG
CVKFTSNYEWQLLLGNLNHHRLPFPYPKGVQDLYPSFVIIYLNQGILTFRNVREAIHSHSLFRTDFRQLR

Specific function: Unknown

COG id: NA

COG function: NA

Gene ontology:

Cell location: Cytoplasmic

Metaboloic importance: NA

Operon status: Not Known

Operon components: None

Similarity: NA

Homologues:

None

Paralogues:

None

Copy number: NA

Swissprot (AC and ID): NA

Other databases:

NA

Pfam domain/function: NA

EC number: NA

Molecular weight: Translated: 17415; Mature: 17415

Theoretical pI: Translated: 9.70; Mature: 9.70

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

2.0 %Cys     (Translated Protein)
2.7 %Met     (Translated Protein)
4.7 %Cys+Met (Translated Protein)
2.0 %Cys     (Mature Protein)
2.7 %Met     (Mature Protein)
4.7 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MHYAMLFLEQGTNEFHCQRQFSGMGIAFFKKYLGSSMTWNVGNPPSKGTLSTCLIHQVSK
CCEEEEEEECCCCCEEHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCC
GSFLSELPFLWLKSPSEHLGCVKFTSNYEWQLLLGNLNHHRLPFPYPKGVQDLYPSFVII
CCHHHHCCEEEECCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCEEEE
YLNQGILTFRNVREAIHSHSLFRTDFRQLR
EECCCCHHHHHHHHHHHHHHHHHHHHHHCC
>Mature Secondary Structure
MHYAMLFLEQGTNEFHCQRQFSGMGIAFFKKYLGSSMTWNVGNPPSKGTLSTCLIHQVSK
CCEEEEEEECCCCCEEHHHHHCCCCHHHHHHHHCCCEEECCCCCCCCCHHHHHHHHHCCC
GSFLSELPFLWLKSPSEHLGCVKFTSNYEWQLLLGNLNHHRLPFPYPKGVQDLYPSFVII
CCHHHHCCEEEECCCCCCCCEEEECCCCEEEEEEECCCCCCCCCCCCCCHHHHCCCEEEE
YLNQGILTFRNVREAIHSHSLFRTDFRQLR
EECCCCHHHHHHHHHHHHHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: NA