Definition Frankia sp. EAN1pec chromosome, complete genome.
Accession NC_009921
Length 8,982,042

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The map label for this gene is bcp [C]

Identifier: 158313700

GI number: 158313700

Start: 2240365

End: 2240823

Strand: Direct

Name: bcp [C]

Synonym: Franean1_1864

Alternate gene names: 158313700

Gene position: 2240365-2240823 (Clockwise)

Preceding gene: 158313698

Following gene: 158313701

Centisome position: 24.94

GC content: 65.36

Gene sequence:

>459_bases
GTGACCGTCGACGTCGGAGCCGTCGCCCCCGACTTCTCGTTGAAGGACCAGAACAACGAGGTCGTCACCCTGTCCGACTT
CCGGGGCCGCCGCAACGTGGTGCTCCTGTTCTACCCGCTGACCTTCACCGGCGTCTGCCAGGGCGAGCTGTGCTCCGTCC
GGGACGACCTGGCCTCCTTCCAGAACGACGACGTGCAGGTACTGGCCATCTCCGTCGACTCCTCCTTCGCGCACAAGGTC
TGGGCCGACCAGCAGGGCTACGAGTTCCCGCTGCTGGCCGACTTCTGGCCGCACGGCGAGGTGGCGAAGGCCTACGGGGT
CTTCAACGAGGAGAAGGGCATCTCCCTCCGCGGAACCTTCATCATCGACAAGGAGGGCAAGGTGCGCTGGAAGGTCGTCA
ACAACATTCCGGACGCACGCGACCAGGCCGAGTACCTCAAGGCCCTCGCCTCGCTGTAG

Upstream 100 bases:

>100_bases
CGGTGGCATGCTGGCGGAGAGGACCGACAGGTCGCGAAGACCGAGAGGTCGAACAGCACCGCAGGACGCGAAAACCAACC
GCAATCGAGAGGAAGAGCTC

Downstream 100 bases:

>100_bases
TCCCGGCGAGCGGCGGGCCGGGTCGCCTCGCCCGTCGGACCCCCGCGAGGTGTTCCCGTGCCAGGGAACACCTCGCGGGG
GTCCCGGCGTGGCATGGCAC

Product: alkyl hydroperoxide reductase/ Thiol specific antioxidant/ Mal allergen

Products: NA

Alternate protein names: Thioredoxin reductase [H]

Number of amino acids: Translated: 152; Mature: 151

Protein sequence:

>152_residues
MTVDVGAVAPDFSLKDQNNEVVTLSDFRGRRNVVLLFYPLTFTGVCQGELCSVRDDLASFQNDDVQVLAISVDSSFAHKV
WADQQGYEFPLLADFWPHGEVAKAYGVFNEEKGISLRGTFIIDKEGKVRWKVVNNIPDARDQAEYLKALASL

Sequences:

>Translated_152_residues
MTVDVGAVAPDFSLKDQNNEVVTLSDFRGRRNVVLLFYPLTFTGVCQGELCSVRDDLASFQNDDVQVLAISVDSSFAHKV
WADQQGYEFPLLADFWPHGEVAKAYGVFNEEKGISLRGTFIIDKEGKVRWKVVNNIPDARDQAEYLKALASL
>Mature_151_residues
TVDVGAVAPDFSLKDQNNEVVTLSDFRGRRNVVLLFYPLTFTGVCQGELCSVRDDLASFQNDDVQVLAISVDSSFAHKVW
ADQQGYEFPLLADFWPHGEVAKAYGVFNEEKGISLRGTFIIDKEGKVRWKVVNNIPDARDQAEYLKALASL

Specific function: Unknown

COG id: COG1225

COG function: function code O; Peroxiredoxin

Gene ontology:

Cell location: Cytoplasm [C]

Metaboloic importance: Non_Essential [C]

Operon status: Not Known

Operon components: None

Similarity: Contains 1 thioredoxin domain [H]

Homologues:

Organism=Homo sapiens, GI4505591, Length=153, Percent_Identity=38.562091503268, Blast_Score=97, Evalue=6e-21,
Organism=Homo sapiens, GI32455266, Length=153, Percent_Identity=38.562091503268, Blast_Score=97, Evalue=6e-21,
Organism=Homo sapiens, GI32455264, Length=153, Percent_Identity=38.562091503268, Blast_Score=97, Evalue=6e-21,
Organism=Homo sapiens, GI32189392, Length=158, Percent_Identity=36.7088607594937, Blast_Score=91, Evalue=4e-19,
Organism=Homo sapiens, GI5453549, Length=133, Percent_Identity=39.0977443609023, Blast_Score=90, Evalue=7e-19,
Organism=Homo sapiens, GI5802974, Length=133, Percent_Identity=36.0902255639098, Blast_Score=86, Evalue=1e-17,
Organism=Homo sapiens, GI32483377, Length=133, Percent_Identity=36.0902255639098, Blast_Score=86, Evalue=1e-17,
Organism=Escherichia coli, GI1788825, Length=131, Percent_Identity=35.8778625954198, Blast_Score=75, Evalue=2e-15,
Organism=Escherichia coli, GI1786822, Length=134, Percent_Identity=29.8507462686567, Blast_Score=66, Evalue=1e-12,
Organism=Caenorhabditis elegans, GI193204376, Length=158, Percent_Identity=35.4430379746835, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI32565831, Length=158, Percent_Identity=35.4430379746835, Blast_Score=91, Evalue=2e-19,
Organism=Caenorhabditis elegans, GI17554494, Length=144, Percent_Identity=34.7222222222222, Blast_Score=91, Evalue=3e-19,
Organism=Saccharomyces cerevisiae, GI6323613, Length=157, Percent_Identity=34.3949044585987, Blast_Score=82, Evalue=4e-17,
Organism=Saccharomyces cerevisiae, GI6320661, Length=157, Percent_Identity=33.7579617834395, Blast_Score=79, Evalue=3e-16,
Organism=Drosophila melanogaster, GI17738015, Length=160, Percent_Identity=36.25, Blast_Score=97, Evalue=5e-21,
Organism=Drosophila melanogaster, GI21357347, Length=159, Percent_Identity=37.7358490566038, Blast_Score=94, Evalue=4e-20,
Organism=Drosophila melanogaster, GI17157991, Length=138, Percent_Identity=38.4057971014493, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24641739, Length=138, Percent_Identity=38.4057971014493, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI24656348, Length=139, Percent_Identity=38.8489208633094, Blast_Score=92, Evalue=1e-19,
Organism=Drosophila melanogaster, GI17864676, Length=139, Percent_Identity=38.8489208633094, Blast_Score=92, Evalue=1e-19,

Paralogues:

None

Copy number: 920 Molecules/Cell In: Growth Phase, Minimal Media (Based on E. coli). [C]

Swissprot (AC and ID): NA

Other databases:

- InterPro:   IPR000866
- InterPro:   IPR017936
- InterPro:   IPR012336
- InterPro:   IPR012335 [H]

Pfam domain/function: PF00578 AhpC-TSA [H]

EC number: =1.11.1.15 [H]

Molecular weight: Translated: 16975; Mature: 16844

Theoretical pI: Translated: 4.52; Mature: 4.52

Prosite motif: NA

Important sites: NA

Signals:

None

Transmembrane regions:

None

Cys/Met content:

1.3 %Cys     (Translated Protein)
0.7 %Met     (Translated Protein)
2.0 %Cys+Met (Translated Protein)
1.3 %Cys     (Mature Protein)
0.0 %Met     (Mature Protein)
1.3 %Cys+Met (Mature Protein)

Secondary structure:

>Translated Secondary Structure
MTVDVGAVAPDFSLKDQNNEVVTLSDFRGRRNVVLLFYPLTFTGVCQGELCSVRDDLASF
CEEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHC
QNDDVQVLAISVDSSFAHKVWADQQGYEFPLLADFWPHGEVAKAYGVFNEEKGISLRGTF
CCCCEEEEEEEECCCCHHHHCCCCCCCCCCEEECCCCCCCHHHHHCCCCCCCCCEEEEEE
IIDKEGKVRWKVVNNIPDARDQAEYLKALASL
EEECCCCEEEEEECCCCCCCHHHHHHHHHHCC
>Mature Secondary Structure 
TVDVGAVAPDFSLKDQNNEVVTLSDFRGRRNVVLLFYPLTFTGVCQGELCSVRDDLASF
EEECCCCCCCCCCCCCCCCEEEEECCCCCCCEEEEEECCCEEECCCCCHHHHHHHHHHC
QNDDVQVLAISVDSSFAHKVWADQQGYEFPLLADFWPHGEVAKAYGVFNEEKGISLRGTF
CCCCEEEEEEEECCCCHHHHCCCCCCCCCCEEECCCCCCCHHHHHCCCCCCCCCEEEEEE
IIDKEGKVRWKVVNNIPDARDQAEYLKALASL
EEECCCCEEEEEECCCCCCCHHHHHHHHHHCC

PDB accession: NA

Resolution: NA

Structure class: Alpha Beta

Cofactors: NA

Metal ions: NA

Kcat value (1/min): NA

Specific activity: NA

Km value (mM): NA

Substrates: NA

Specific reaction: NA

General reaction: NA

Inhibitor: NA

Structure determination priority: 10.0

TargetDB status: NA

Availability: NA

References: 9634230; 12218036 [H]